RNA–Protein interactions for RNA: ENST00000474289.6

ECHDC1-214, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene ECHDC1, Length 2,443 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-214ENST00000474289 A8MUI8 341 aa20.26■□□□□ 0.83
ECHDC1-214ENST00000474289 IGF2BP3O00425 579 aaKnown RBP eCLIP20.26■□□□□ 0.83
ECHDC1-214ENST00000474289 TRAF5O00463 557 aa20.26■□□□□ 0.83
ECHDC1-214ENST00000474289 EVA1CP58658 441 aa20.26■□□□□ 0.83
ECHDC1-214ENST00000474289 ADCY2Q08462 1091 aa20.26■□□□□ 0.83
ECHDC1-214ENST00000474289 ZNF571Q7Z3V5 609 aaPredicted RBP20.26■□□□□ 0.83
ECHDC1-214ENST00000474289 PEX26Q7Z412 305 aa20.26■□□□□ 0.83
ECHDC1-214ENST00000474289 ERICH1Q86X53 443 aa20.26■□□□□ 0.83
ECHDC1-214ENST00000474289 CCDC134Q9H6E4 229 aa20.26■□□□□ 0.83
ECHDC1-214ENST00000474289 HOMER3Q9NSC5 361 aa20.26■□□□□ 0.83
ECHDC1-214ENST00000474289 WDR3Q9UNX4 943 aaKnown RBP eCLIP20.26■□□□□ 0.83
ECHDC1-214ENST00000474289 TLDC2A0PJX2 215 aa20.26■□□□□ 0.83
ECHDC1-214ENST00000474289 CYTH3O43739 400 aa20.26■□□□□ 0.83
ECHDC1-214ENST00000474289 IFI35P80217 286 aaPredicted RBP20.26■□□□□ 0.83
ECHDC1-214ENST00000474289 AP1ARQ63HQ0 302 aa20.26■□□□□ 0.83
ECHDC1-214ENST00000474289 ZNF384Q8TF68 577 aa20.26■□□□□ 0.83
ECHDC1-214ENST00000474289 GANQ9H2C0 597 aa20.26■□□□□ 0.83
ECHDC1-214ENST00000474289 ECT2Q9H8V3 914 aa20.26■□□□□ 0.83
ECHDC1-214ENST00000474289 CD2APQ9Y5K6 639 aa20.26■□□□□ 0.83
ECHDC1-214ENST00000474289 SMIM23A6NLE4 172 aa20.25■□□□□ 0.83
ECHDC1-214ENST00000474289 GYG1P46976 350 aa20.25■□□□□ 0.83
ECHDC1-214ENST00000474289 IFNAR2P48551 515 aa20.25■□□□□ 0.83
ECHDC1-214ENST00000474289 CHRNDQ07001 517 aa20.25■□□□□ 0.83
ECHDC1-214ENST00000474289 C10orf76Q5T2E6 689 aa20.25■□□□□ 0.83
ECHDC1-214ENST00000474289 PNMA1Q8ND90 353 aa20.25■□□□□ 0.83
ECHDC1-214ENST00000474289 ZBTB10Q96DT7 871 aa20.25■□□□□ 0.83
ECHDC1-214ENST00000474289 PNMA5Q96PV4 448 aa20.25■□□□□ 0.83
ECHDC1-214ENST00000474289 ZMYND12Q9H0C1 365 aa20.25■□□□□ 0.83
ECHDC1-214ENST00000474289 AZI2Q9H6S1 392 aa20.25■□□□□ 0.83
ECHDC1-214ENST00000474289 GOPCQ9HD26 462 aa20.25■□□□□ 0.83
ECHDC1-214ENST00000474289 SNX3O60493 162 aa20.25■□□□□ 0.83
ECHDC1-214ENST00000474289 KRT16P08779 473 aa20.25■□□□□ 0.83
ECHDC1-214ENST00000474289 CYP2D6P10635 497 aa20.25■□□□□ 0.83
ECHDC1-214ENST00000474289 PDE6BP35913 854 aa20.25■□□□□ 0.83
ECHDC1-214ENST00000474289 BLMHQ13867 455 aa20.25■□□□□ 0.83
ECHDC1-214ENST00000474289 SPDYE1Q8NFV5 336 aaPredicted RBP20.25■□□□□ 0.83
ECHDC1-214ENST00000474289 NEK9Q8TD19 979 aa20.25■□□□□ 0.83
ECHDC1-214ENST00000474289 PABPC3Q9H361 631 aaKnown RBP20.25■□□□□ 0.83
ECHDC1-214ENST00000474289 STK17AQ9UEE5 414 aa20.25■□□□□ 0.83
ECHDC1-214ENST00000474289 MAD2L2Q9UI95 211 aa20.25■□□□□ 0.83
ECHDC1-214ENST00000474289 NAGPAQ9UK23 515 aa20.25■□□□□ 0.83
ECHDC1-214ENST00000474289 NR2E1Q9Y466 385 aa20.25■□□□□ 0.83
ECHDC1-214ENST00000474289 COL1A1P02452 1464 aaPredicted RBP20.25■□□□□ 0.83
ECHDC1-214ENST00000474289 STRCP1A6NGW2 1772 aa20.25■□□□□ 0.83
ECHDC1-214ENST00000474289 KAT6BQ8WYB5 2073 aa20.24■□□□□ 0.83
ECHDC1-214ENST00000474289 LIN7AO14910 233 aaPredicted RBP20.24■□□□□ 0.83
ECHDC1-214ENST00000474289 FOXR2Q6PJQ5 311 aa20.24■□□□□ 0.83
ECHDC1-214ENST00000474289 IRF2BP2Q7Z5L9 587 aa20.24■□□□□ 0.83
ECHDC1-214ENST00000474289 DAAM2Q86T65 1068 aa20.24■□□□□ 0.83
ECHDC1-214ENST00000474289 MYOCDQ8IZQ8 938 aa20.24■□□□□ 0.83
ECHDC1-214ENST00000474289 KIF2BQ8N4N8 673 aa20.24■□□□□ 0.83
ECHDC1-214ENST00000474289 DDX12PQ92771 950 aa20.24■□□□□ 0.83
ECHDC1-214ENST00000474289 NSRP1Q9H0G5 558 aaKnown RBP20.24■□□□□ 0.83
ECHDC1-214ENST00000474289 ZDHHC18Q9NUE0 388 aa20.24■□□□□ 0.83
ECHDC1-214ENST00000474289 STXBP5LQ9Y2K9 1186 aa20.24■□□□□ 0.83
ECHDC1-214ENST00000474289 UTP18Q9Y5J1 556 aaKnown RBP eCLIP20.24■□□□□ 0.83
ECHDC1-214ENST00000474289 DCCP43146 1447 aa20.24■□□□□ 0.83
ECHDC1-214ENST00000474289 ANKRD33BA6NCL7 494 aa20.24■□□□□ 0.83
ECHDC1-214ENST00000474289 CCDC169A6NNP5 214 aa20.24■□□□□ 0.83
ECHDC1-214ENST00000474289 ERVV-1B6SEH8 477 aa20.24■□□□□ 0.83
ECHDC1-214ENST00000474289 TXKP42681 527 aa20.24■□□□□ 0.83
ECHDC1-214ENST00000474289 GALNTL6Q49A17 601 aa20.24■□□□□ 0.83
ECHDC1-214ENST00000474289 ANKRD20A2Q5SQ80 823 aa20.24■□□□□ 0.83
ECHDC1-214ENST00000474289 ANKRD20A1Q5TYW2 823 aa20.24■□□□□ 0.83
ECHDC1-214ENST00000474289 ANKRD20A3Q5VUR7 823 aa20.24■□□□□ 0.83
ECHDC1-214ENST00000474289 SLFN11Q7Z7L1 901 aa20.24■□□□□ 0.83
ECHDC1-214ENST00000474289 TRIM59Q8IWR1 403 aa20.24■□□□□ 0.83
ECHDC1-214ENST00000474289 RNF25Q96BH1 459 aaPredicted RBP20.24■□□□□ 0.83
ECHDC1-214ENST00000474289 YIPF3Q9GZM5 350 aa20.24■□□□□ 0.83
ECHDC1-214ENST00000474289 SUCLA2Q9P2R7 463 aaPredicted RBP20.24■□□□□ 0.83
ECHDC1-214ENST00000474289 RGS16O15492 202 aaPredicted RBP20.23■□□□□ 0.83
ECHDC1-214ENST00000474289 OAS1P00973 400 aaKnown RBP20.23■□□□□ 0.83
ECHDC1-214ENST00000474289 ABL2P42684 1182 aa20.23■□□□□ 0.83
ECHDC1-214ENST00000474289 ZNF131P52739 623 aa20.23■□□□□ 0.83
ECHDC1-214ENST00000474289 PMS2P54278 862 aa20.23■□□□□ 0.83
ECHDC1-214ENST00000474289 NONOQ15233 471 aaKnown RBP eCLIP20.23■□□□□ 0.83
ECHDC1-214ENST00000474289 DENND2CQ68D51 928 aa20.23■□□□□ 0.83
ECHDC1-214ENST00000474289 ALKBH5Q6P6C2 394 aaKnown RBP20.23■□□□□ 0.83
ECHDC1-214ENST00000474289 KLHL29Q96CT2 875 aa20.23■□□□□ 0.83
ECHDC1-214ENST00000474289 RAB17Q9H0T7 212 aa20.23■□□□□ 0.83
ECHDC1-214ENST00000474289 COL4A1P02462 1669 aa20.23■□□□□ 0.83
ECHDC1-214ENST00000474289 ATAD5Q96QE3 1844 aa20.23■□□□□ 0.83
ECHDC1-214ENST00000474289 SPDYE3A6NKU9 549 aa20.23■□□□□ 0.83
ECHDC1-214ENST00000474289 FGGP02679 453 aa20.23■□□□□ 0.83
ECHDC1-214ENST00000474289 IGHMBP2P38935 993 aaKnown RBP20.23■□□□□ 0.83
ECHDC1-214ENST00000474289 NEK8Q86SG6 692 aa20.23■□□□□ 0.83
ECHDC1-214ENST00000474289 DCP1AQ9NPI6 582 aaPredicted RBP20.23■□□□□ 0.83
ECHDC1-214ENST00000474289 MKRN4PQ13434 485 aaPredicted RBP20.22■□□□□ 0.83
ECHDC1-214ENST00000474289 GRM4Q14833 912 aa20.22■□□□□ 0.83
ECHDC1-214ENST00000474289 BRINP3Q76B58 766 aa20.22■□□□□ 0.83
ECHDC1-214ENST00000474289 KRT25Q7Z3Z0 450 aa20.22■□□□□ 0.83
ECHDC1-214ENST00000474289 NT5DC3Q86UY8 548 aa20.22■□□□□ 0.83
ECHDC1-214ENST00000474289 CDK5RAP3Q96JB5 506 aa20.22■□□□□ 0.83
ECHDC1-214ENST00000474289 ITGB4P16144 1822 aa20.22■□□□□ 0.83
ECHDC1-214ENST00000474289 LINGO3P0C6S8 592 aa20.22■□□□□ 0.83
ECHDC1-214ENST00000474289 PDE6CP51160 858 aa20.22■□□□□ 0.83
ECHDC1-214ENST00000474289 KLRC3Q07444 240 aa20.22■□□□□ 0.83
ECHDC1-214ENST00000474289 PSMD2Q13200 908 aa20.22■□□□□ 0.83
ECHDC1-214ENST00000474289 SLC29A2Q14542 456 aa20.22■□□□□ 0.83
ECHDC1-214ENST00000474289 DUPD1Q68J44 220 aa20.22■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms