RNA–Protein interactions for RNA: ENST00000474246.1

SMARCE1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-208ENST00000474246 OR52K2Q8NGK3 314 aa6.74□□□□□ -1.33
SMARCE1-208ENST00000474246 RASGRP4Q8TDF6 673 aa6.74□□□□□ -1.33
SMARCE1-208ENST00000474246 ZIC5Q96T25 663 aa6.74□□□□□ -1.33
SMARCE1-208ENST00000474246 MTRQ99707 1265 aa6.74□□□□□ -1.33
SMARCE1-208ENST00000474246 HERC2P3Q9BVR0 1158 aa6.74□□□□□ -1.33
SMARCE1-208ENST00000474246 PRDM9Q9NQV7 894 aa6.74□□□□□ -1.33
SMARCE1-208ENST00000474246 PHTF1Q9UMS5 762 aa6.74□□□□□ -1.33
SMARCE1-208ENST00000474246 UNC80Q8N2C7 3258 aa6.74□□□□□ -1.33
SMARCE1-208ENST00000474246 EVC2Q86UK5 1308 aa6.74□□□□□ -1.33
SMARCE1-208ENST00000474246 SMG6Q86US8 1419 aaKnown RBP6.74□□□□□ -1.33
SMARCE1-208ENST00000474246 CEP290O15078 2479 aa6.74□□□□□ -1.33
SMARCE1-208ENST00000474246 USP17L5A8MUK1 530 aa6.74□□□□□ -1.33
SMARCE1-208ENST00000474246 ZBTB14O43829 449 aa6.74□□□□□ -1.33
SMARCE1-208ENST00000474246 CELF2O95319 508 aaKnown RBP6.74□□□□□ -1.33
SMARCE1-208ENST00000474246 EEF2P13639 858 aaKnown RBP6.74□□□□□ -1.33
SMARCE1-208ENST00000474246 SOX5P35711 763 aa6.74□□□□□ -1.33
SMARCE1-208ENST00000474246 MPP1Q00013 466 aa6.74□□□□□ -1.33
SMARCE1-208ENST00000474246 ATP2B2Q01814 1243 aa6.74□□□□□ -1.33
SMARCE1-208ENST00000474246 PLCB3Q01970 1234 aa6.74□□□□□ -1.33
SMARCE1-208ENST00000474246 TCIRG1Q13488 830 aa6.74□□□□□ -1.33
SMARCE1-208ENST00000474246 RCN1Q15293 331 aa6.74□□□□□ -1.33
SMARCE1-208ENST00000474246 PROSER3Q2NL68 480 aa6.74□□□□□ -1.33
SMARCE1-208ENST00000474246 TM4SF20Q53R12 229 aa6.74□□□□□ -1.33
SMARCE1-208ENST00000474246 ANGPTL8Q6UXH0 198 aa6.74□□□□□ -1.33
SMARCE1-208ENST00000474246 NLRP10Q86W26 655 aa6.74□□□□□ -1.33
SMARCE1-208ENST00000474246 NAT8LQ8N9F0 302 aa6.74□□□□□ -1.33
SMARCE1-208ENST00000474246 ASB2Q96Q27 587 aa6.74□□□□□ -1.33
SMARCE1-208ENST00000474246 SPSB2Q99619 263 aa6.74□□□□□ -1.33
SMARCE1-208ENST00000474246 CDX2Q99626 313 aaPredicted RBP6.74□□□□□ -1.33
SMARCE1-208ENST00000474246 LMAN2LQ9H0V9 348 aa6.74□□□□□ -1.33
SMARCE1-208ENST00000474246 VPS37BQ9H9H4 285 aa6.74□□□□□ -1.33
SMARCE1-208ENST00000474246 CXXC1Q9P0U4 656 aaPredicted RBP6.74□□□□□ -1.33
SMARCE1-208ENST00000474246 STK39Q9UEW8 545 aa6.74□□□□□ -1.33
SMARCE1-208ENST00000474246 GGT7Q9UJ14 662 aa6.74□□□□□ -1.33
SMARCE1-208ENST00000474246 PARP3Q9Y6F1 533 aa6.74□□□□□ -1.33
SMARCE1-208ENST00000474246 CNTNAP4Q9C0A0 1308 aa6.74□□□□□ -1.33
SMARCE1-208ENST00000474246 TRPM7Q96QT4 1865 aa6.74□□□□□ -1.33
SMARCE1-208ENST00000474246 ARPC4-TTLL3A0A0A6YYG9 625 aa6.73□□□□□ -1.33
SMARCE1-208ENST00000474246 SART1O43290 800 aaKnown RBP6.73□□□□□ -1.33
SMARCE1-208ENST00000474246 ZBTB43O43298 467 aa6.73□□□□□ -1.33
SMARCE1-208ENST00000474246 CD4P01730 458 aa6.73□□□□□ -1.33
SMARCE1-208ENST00000474246 MT-ND3P03897 115 aa6.73□□□□□ -1.33
SMARCE1-208ENST00000474246 CTSHP09668 335 aa6.73□□□□□ -1.33
SMARCE1-208ENST00000474246 PCP11498 1178 aaKnown RBP6.73□□□□□ -1.33
SMARCE1-208ENST00000474246 HOXC12P31275 282 aa6.73□□□□□ -1.33
SMARCE1-208ENST00000474246 SCNN1DP51172 638 aa6.73□□□□□ -1.33
SMARCE1-208ENST00000474246 RPS6KA3P51812 740 aa6.73□□□□□ -1.33
SMARCE1-208ENST00000474246 CASP7P55210 303 aa6.73□□□□□ -1.33
SMARCE1-208ENST00000474246 ITIH3Q06033 890 aa6.73□□□□□ -1.33
SMARCE1-208ENST00000474246 EHHADHQ08426 723 aa6.73□□□□□ -1.33
SMARCE1-208ENST00000474246 FAPQ12884 760 aa6.73□□□□□ -1.33
SMARCE1-208ENST00000474246 WSCD2Q2TBF2 565 aa6.73□□□□□ -1.33
SMARCE1-208ENST00000474246 ANKDD1AQ495B1 522 aa6.73□□□□□ -1.33
SMARCE1-208ENST00000474246 TTC39AQ5SRH9 613 aa6.73□□□□□ -1.33
SMARCE1-208ENST00000474246 XRRA1Q6P2D8 792 aa6.73□□□□□ -1.33
SMARCE1-208ENST00000474246 INTS8Q75QN2 995 aaKnown RBP6.73□□□□□ -1.33
SMARCE1-208ENST00000474246 ZER1Q7Z7L7 766 aa6.73□□□□□ -1.33
SMARCE1-208ENST00000474246 DEPDC4Q8N2C3 294 aa6.73□□□□□ -1.33
SMARCE1-208ENST00000474246 PPP1R14CQ8TAE6 165 aa6.73□□□□□ -1.33
SMARCE1-208ENST00000474246 POF1BQ8WVV4 589 aa6.73□□□□□ -1.33
SMARCE1-208ENST00000474246 ZNF516Q92618 1163 aa6.73□□□□□ -1.33
SMARCE1-208ENST00000474246 NCOR1P1Q9H4R4 102 aa6.73□□□□□ -1.33
SMARCE1-208ENST00000474246 FAM50BQ9Y247 325 aa6.73□□□□□ -1.33
SMARCE1-208ENST00000474246 LACTBL1A8MY62 500 aa6.73□□□□□ -1.33
SMARCE1-208ENST00000474246 NDC80O14777 642 aa6.73□□□□□ -1.33
SMARCE1-208ENST00000474246 ZBTB24O43167 697 aaPredicted RBP6.73□□□□□ -1.33
SMARCE1-208ENST00000474246 ASMTLO95671 621 aa6.73□□□□□ -1.33
SMARCE1-208ENST00000474246 HSD3B1P14060 373 aa6.73□□□□□ -1.33
SMARCE1-208ENST00000474246 TM4SF4P48230 202 aa6.73□□□□□ -1.33
SMARCE1-208ENST00000474246 GJA9P57773 515 aa6.73□□□□□ -1.33
SMARCE1-208ENST00000474246 EIF4G2P78344 907 aaKnown RBP eCLIP6.73□□□□□ -1.33
SMARCE1-208ENST00000474246 OCLNQ16625 522 aa6.73□□□□□ -1.33
SMARCE1-208ENST00000474246 IMMTQ16891 758 aaKnown RBP6.73□□□□□ -1.33
SMARCE1-208ENST00000474246 GPATCH4Q5T3I0 446 aaKnown RBP6.73□□□□□ -1.33
SMARCE1-208ENST00000474246 LYPD8Q6UX82 237 aa6.73□□□□□ -1.33
SMARCE1-208ENST00000474246 TDHQ8IZJ6 230 aa6.73□□□□□ -1.33
SMARCE1-208ENST00000474246 SYNPOQ8N3V7 929 aa6.73□□□□□ -1.33
SMARCE1-208ENST00000474246 FAM160A2Q8N612 972 aaPredicted RBP6.73□□□□□ -1.33
SMARCE1-208ENST00000474246 UBR7Q8N806 425 aa6.73□□□□□ -1.33
SMARCE1-208ENST00000474246 C7orf31Q8N865 590 aa6.73□□□□□ -1.33
SMARCE1-208ENST00000474246 ZNF540Q8NDQ6 660 aa6.73□□□□□ -1.33
SMARCE1-208ENST00000474246 SGCDQ92629 289 aa6.73□□□□□ -1.33
SMARCE1-208ENST00000474246 CNTNAP3BQ96NU0 1288 aa6.73□□□□□ -1.33
SMARCE1-208ENST00000474246 CNTNAP3Q9BZ76 1288 aa6.73□□□□□ -1.33
SMARCE1-208ENST00000474246 KLHL11Q9NVR0 708 aa6.73□□□□□ -1.33
SMARCE1-208ENST00000474246 HPF1Q9NWY4 346 aa6.73□□□□□ -1.33
SMARCE1-208ENST00000474246 ZC3H7BQ9UGR2 993 aaKnown RBP6.73□□□□□ -1.33
SMARCE1-208ENST00000474246 SH3BGRL2Q9UJC5 107 aa6.73□□□□□ -1.33
SMARCE1-208ENST00000474246 MSRB2Q9Y3D2 182 aa6.73□□□□□ -1.33
SMARCE1-208ENST00000474246 BTBD11A6QL63 1104 aa6.72□□□□□ -1.33
SMARCE1-208ENST00000474246 GPR25O00155 361 aa6.72□□□□□ -1.33
SMARCE1-208ENST00000474246 MASP2O00187 686 aa6.72□□□□□ -1.33
SMARCE1-208ENST00000474246 TMEM127O75204 238 aa6.72□□□□□ -1.33
SMARCE1-208ENST00000474246 ZPR1O75312 459 aa6.72□□□□□ -1.33
SMARCE1-208ENST00000474246 TGDSO95455 350 aa6.72□□□□□ -1.33
SMARCE1-208ENST00000474246 YEATS4O95619 227 aa6.72□□□□□ -1.33
SMARCE1-208ENST00000474246 MZF1P28698 734 aaPredicted RBP6.72□□□□□ -1.33
SMARCE1-208ENST00000474246 ADH7P40394 386 aa6.72□□□□□ -1.33
SMARCE1-208ENST00000474246 ICA1Q05084 483 aa6.72□□□□□ -1.33
SMARCE1-208ENST00000474246 MTMR1Q13613 665 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms