RNA–Protein interactions for RNA: ENST00000473783.5

SSBP1-209, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 5

Gene SSBP1, Length 470 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-209ENST00000473783 HIDE1A8MVS5 230 aa12.24□□□□□ -0.45
SSBP1-209ENST00000473783 EOMESO95936 686 aa12.24□□□□□ -0.45
SSBP1-209ENST00000473783 CFBP00751 764 aa12.24□□□□□ -0.45
SSBP1-209ENST00000473783 FGRP09769 529 aa12.24□□□□□ -0.45
SSBP1-209ENST00000473783 SP9P0CG40 484 aa12.24□□□□□ -0.45
SSBP1-209ENST00000473783 HSD17B4P51659 736 aa12.24□□□□□ -0.45
SSBP1-209ENST00000473783 MRPS6P82932 125 aaKnown RBP12.24□□□□□ -0.45
SSBP1-209ENST00000473783 PLCB3Q01970 1234 aa12.24□□□□□ -0.45
SSBP1-209ENST00000473783 LMNB2Q03252 620 aa12.24□□□□□ -0.45
SSBP1-209ENST00000473783 TBC1D8BQ0IIM8 1120 aa12.24□□□□□ -0.45
SSBP1-209ENST00000473783 APOBRQ0VD83 1088 aa12.24□□□□□ -0.45
SSBP1-209ENST00000473783 PGM5Q15124 567 aa12.24□□□□□ -0.45
SSBP1-209ENST00000473783 METTL7BQ6UX53 244 aa12.24□□□□□ -0.45
SSBP1-209ENST00000473783 FAM43BQ6ZT52 329 aaPredicted RBP12.24□□□□□ -0.45
SSBP1-209ENST00000473783 ACSF2Q96CM8 615 aaPredicted RBP12.24□□□□□ -0.45
SSBP1-209ENST00000473783 ECHDC1Q9NTX5 307 aa12.24□□□□□ -0.45
SSBP1-209ENST00000473783 MAP3K20Q9NYL2 800 aaKnown RBP12.24□□□□□ -0.45
SSBP1-209ENST00000473783 NCDNQ9UBB6 729 aa12.24□□□□□ -0.45
SSBP1-209ENST00000473783 DBR1Q9UK59 544 aaKnown RBP12.24□□□□□ -0.45
SSBP1-209ENST00000473783 CEP295Q9C0D2 2601 aa12.23□□□□□ -0.45
SSBP1-209ENST00000473783 KINO60870 393 aaKnown RBP12.23□□□□□ -0.45
SSBP1-209ENST00000473783 LAG3P18627 525 aa12.23□□□□□ -0.45
SSBP1-209ENST00000473783 RFX1P22670 979 aa12.23□□□□□ -0.45
SSBP1-209ENST00000473783 SARSP49591 514 aaKnown RBP12.23□□□□□ -0.45
SSBP1-209ENST00000473783 NEDD9Q14511 834 aa12.23□□□□□ -0.45
SSBP1-209ENST00000473783 ATAT1Q5SQI0 421 aa12.23□□□□□ -0.45
SSBP1-209ENST00000473783 STOX1Q6ZVD7 989 aa12.23□□□□□ -0.45
SSBP1-209ENST00000473783 DNAJB3Q8WWF6 145 aa12.23□□□□□ -0.45
SSBP1-209ENST00000473783 COL26A1Q96A83 441 aa12.23□□□□□ -0.45
SSBP1-209ENST00000473783 TTC14Q96N46 770 aa12.23□□□□□ -0.45
SSBP1-209ENST00000473783 GPR20Q99678 358 aa12.23□□□□□ -0.45
SSBP1-209ENST00000473783 WNT16Q9UBV4 365 aa12.23□□□□□ -0.45
SSBP1-209ENST00000473783 TUBE1Q9UJT0 475 aa12.23□□□□□ -0.45
SSBP1-209ENST00000473783 PADI3Q9ULW8 664 aa12.23□□□□□ -0.45
SSBP1-209ENST00000473783 PCDHB7Q9Y5E2 793 aa12.23□□□□□ -0.45
SSBP1-209ENST00000473783 IGSF9BQ9UPX0 1349 aa12.22□□□□□ -0.45
SSBP1-209ENST00000473783 MIA3Q5JRA6 1907 aa12.22□□□□□ -0.45
SSBP1-209ENST00000473783 MBLAC1A4D2B0 266 aaPredicted RBP12.22□□□□□ -0.45
SSBP1-209ENST00000473783 TBKBP1A7MCY6 615 aa12.22□□□□□ -0.45
SSBP1-209ENST00000473783 STK25O00506 426 aa12.22□□□□□ -0.45
SSBP1-209ENST00000473783 GOLGA8HP0CJ92 632 aa12.22□□□□□ -0.45
SSBP1-209ENST00000473783 CCND2P30279 289 aa12.22□□□□□ -0.45
SSBP1-209ENST00000473783 PPM1AP35813 382 aa12.22□□□□□ -0.45
SSBP1-209ENST00000473783 PAK2Q13177 524 aa12.22□□□□□ -0.45
SSBP1-209ENST00000473783 QRICH1Q2TAL8 776 aa12.22□□□□□ -0.45
SSBP1-209ENST00000473783 GNPTABQ3T906 1256 aa12.22□□□□□ -0.45
SSBP1-209ENST00000473783 VARS2Q5ST30 1063 aaKnown RBP12.22□□□□□ -0.45
SSBP1-209ENST00000473783 IER5Q5VY09 327 aa12.22□□□□□ -0.45
SSBP1-209ENST00000473783 XRRA1Q6P2D8 792 aa12.22□□□□□ -0.45
SSBP1-209ENST00000473783 SAMD3Q8N6K7 520 aa12.22□□□□□ -0.45
SSBP1-209ENST00000473783 IL31RAQ8NI17 732 aa12.22□□□□□ -0.45
SSBP1-209ENST00000473783 GPKOWQ92917 476 aaPredicted RBP eCLIP12.22□□□□□ -0.455e-7■■■■■ 43.5
SSBP1-209ENST00000473783 SEC62Q99442 399 aaKnown RBP12.22□□□□□ -0.45
SSBP1-209ENST00000473783 UBA5Q9GZZ9 404 aa12.22□□□□□ -0.45
SSBP1-209ENST00000473783 CPVLQ9H3G5 476 aa12.22□□□□□ -0.45
SSBP1-209ENST00000473783 TOMM22Q9NS69 142 aa12.22□□□□□ -0.45
SSBP1-209ENST00000473783 DZANK1Q9NVP4 752 aa12.22□□□□□ -0.45
SSBP1-209ENST00000473783 RALYQ9UKM9 306 aaKnown RBP12.22□□□□□ -0.45
SSBP1-209ENST00000473783 C2orf16Q68DN1 1984 aa12.21□□□□□ -0.45
SSBP1-209ENST00000473783 DCDC2BA2VCK2 349 aa12.21□□□□□ -0.45
SSBP1-209ENST00000473783 M0QZ92 97 aa12.21□□□□□ -0.45
SSBP1-209ENST00000473783 OPLAHO14841 1288 aa12.21□□□□□ -0.45
SSBP1-209ENST00000473783 SPTLC1O15269 473 aa12.21□□□□□ -0.45
SSBP1-209ENST00000473783 FOXP2O15409 715 aa12.21□□□□□ -0.45
SSBP1-209ENST00000473783 WEE2P0C1S8 567 aa12.21□□□□□ -0.45
SSBP1-209ENST00000473783 DMWDQ09019 674 aa12.21□□□□□ -0.45
SSBP1-209ENST00000473783 PPFIA1Q13136 1202 aa12.21□□□□□ -0.45
SSBP1-209ENST00000473783 RARS2Q5T160 578 aaKnown RBP12.21□□□□□ -0.45
SSBP1-209ENST00000473783 UTP14CQ5TAP6 766 aaKnown RBP12.21□□□□□ -0.45
SSBP1-209ENST00000473783 CYFIP1Q7L576 1253 aa12.21□□□□□ -0.45
SSBP1-209ENST00000473783 OTOP3Q7RTS5 596 aa12.21□□□□□ -0.45
SSBP1-209ENST00000473783 TMC7Q7Z402 723 aa12.21□□□□□ -0.45
SSBP1-209ENST00000473783 C1orf210Q8IVY1 113 aa12.21□□□□□ -0.45
SSBP1-209ENST00000473783 SIRT2Q8IXJ6 389 aa12.21□□□□□ -0.45
SSBP1-209ENST00000473783 ADGRF4Q8IZF3 695 aa12.21□□□□□ -0.45
SSBP1-209ENST00000473783 SECISBP2LQ93073 1101 aaKnown RBP12.21□□□□□ -0.45
SSBP1-209ENST00000473783 LRRCC1Q9C099 1032 aa12.21□□□□□ -0.45
SSBP1-209ENST00000473783 BCAS3Q9H6U6 928 aa12.21□□□□□ -0.45
SSBP1-209ENST00000473783 KCNK12Q9HB15 430 aa12.21□□□□□ -0.45
SSBP1-209ENST00000473783 TYW1Q9NV66 732 aaKnown RBP12.21□□□□□ -0.45
SSBP1-209ENST00000473783 IGSF9Q9P2J2 1179 aa12.21□□□□□ -0.45
SSBP1-209ENST00000473783 KRT17Q04695 432 aa12.2□□□□□ -0.46
SSBP1-209ENST00000473783 SMC1AQ14683 1233 aaKnown RBP12.2□□□□□ -0.46
SSBP1-209ENST00000473783 GRIK4Q16099 956 aa12.2□□□□□ -0.46
SSBP1-209ENST00000473783 RRP12Q5JTH9 1297 aaKnown RBP12.2□□□□□ -0.46
SSBP1-209ENST00000473783 ZMYM1Q5SVZ6 1142 aa12.2□□□□□ -0.46
SSBP1-209ENST00000473783 MRPL43Q8N983 215 aaKnown RBP12.2□□□□□ -0.46
SSBP1-209ENST00000473783 GPATCH3Q96I76 525 aa12.2□□□□□ -0.46
SSBP1-209ENST00000473783 INPP4AQ96PE3 977 aaPredicted RBP12.2□□□□□ -0.46
SSBP1-209ENST00000473783 CWH43Q9H720 699 aa12.2□□□□□ -0.46
SSBP1-209ENST00000473783 TBC1D17Q9HA65 648 aa12.2□□□□□ -0.46
SSBP1-209ENST00000473783 SH2B1Q9NRF2 756 aaPredicted RBP12.2□□□□□ -0.46
SSBP1-209ENST00000473783 C1orf112Q9NSG2 853 aa12.2□□□□□ -0.46
SSBP1-209ENST00000473783 DLGAP2Q9P1A6 1054 aa12.2□□□□□ -0.46
SSBP1-209ENST00000473783 HCSTQ9UBK5 93 aa12.2□□□□□ -0.46
SSBP1-209ENST00000473783 TRPV2Q9Y5S1 764 aa12.2□□□□□ -0.46
SSBP1-209ENST00000473783 PATJQ8NI35 1801 aa12.19□□□□□ -0.46
SSBP1-209ENST00000473783 DOCK8Q8NF50 2099 aa12.19□□□□□ -0.46
SSBP1-209ENST00000473783 KRBA1A5PL33 1030 aa12.19□□□□□ -0.46
SSBP1-209ENST00000473783 C2orf71A6NGG8 1288 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms