RNA–Protein interactions for RNA: ENST00000473626.1

CNOT9-206, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

TSL 4

Gene CNOT9, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-206ENST00000473626 LHFPL2Q6ZUX7 228 aa7.58□□□□□ -1.2
CNOT9-206ENST00000473626 KIF18BQ86Y91 864 aa7.58□□□□□ -1.2
CNOT9-206ENST00000473626 DTX3Q8N9I9 347 aa7.58□□□□□ -1.2
CNOT9-206ENST00000473626 GBP4Q96PP9 640 aa7.58□□□□□ -1.2
CNOT9-206ENST00000473626 KRTAP4-8Q9BYQ9 185 aa7.58□□□□□ -1.2
CNOT9-206ENST00000473626 NGRNQ9NPE2 291 aaKnown RBP7.58□□□□□ -1.2
CNOT9-206ENST00000473626 HSPBP1Q9NZL4 362 aa7.58□□□□□ -1.2
CNOT9-206ENST00000473626 ARHGAP28Q9P2N2 729 aa7.58□□□□□ -1.2
CNOT9-206ENST00000473626 PRAMEF22A3QJZ6 481 aa7.57□□□□□ -1.2
CNOT9-206ENST00000473626 LCHNA4D1U4 455 aa7.57□□□□□ -1.2
CNOT9-206ENST00000473626 NEMP1O14524 444 aa7.57□□□□□ -1.2
CNOT9-206ENST00000473626 TGM5O43548 720 aa7.57□□□□□ -1.2
CNOT9-206ENST00000473626 FKBP9O95302 570 aa7.57□□□□□ -1.2
CNOT9-206ENST00000473626 IL18BPO95998 194 aa7.57□□□□□ -1.2
CNOT9-206ENST00000473626 SOX5P35711 763 aa7.57□□□□□ -1.2
CNOT9-206ENST00000473626 SART3Q15020 963 aaKnown RBP7.57□□□□□ -1.2
CNOT9-206ENST00000473626 ZNF174Q15697 407 aa7.57□□□□□ -1.2
CNOT9-206ENST00000473626 RNF187Q5TA31 235 aaPredicted RBP7.57□□□□□ -1.2
CNOT9-206ENST00000473626 PRAMEF18Q5VWM3 479 aa7.57□□□□□ -1.2
CNOT9-206ENST00000473626 LRSAM1Q6UWE0 723 aa7.57□□□□□ -1.2
CNOT9-206ENST00000473626 FKBP9P1Q75LS8 142 aa7.57□□□□□ -1.2
CNOT9-206ENST00000473626 KRT26Q7Z3Y9 468 aa7.57□□□□□ -1.2
CNOT9-206ENST00000473626 AFAP1L2Q8N4X5 818 aa7.57□□□□□ -1.2
CNOT9-206ENST00000473626 HIPK4Q8NE63 616 aa7.57□□□□□ -1.2
CNOT9-206ENST00000473626 TACO1Q9BSH4 297 aaKnown RBP7.57□□□□□ -1.2
CNOT9-206ENST00000473626 PCIF1Q9H4Z3 704 aa7.57□□□□□ -1.2
CNOT9-206ENST00000473626 TOMM22Q9NS69 142 aa7.57□□□□□ -1.2
CNOT9-206ENST00000473626 ANKRD62A6NC57 917 aa7.56□□□□□ -1.2
CNOT9-206ENST00000473626 RFXAPO00287 272 aa7.56□□□□□ -1.2
CNOT9-206ENST00000473626 MPIG6BO95866 241 aa7.56□□□□□ -1.2
CNOT9-206ENST00000473626 AOAHP28039 575 aa7.56□□□□□ -1.2
CNOT9-206ENST00000473626 SDHAP31040 664 aa7.56□□□□□ -1.2
CNOT9-206ENST00000473626 KPNA1P52294 538 aaPredicted RBP7.56□□□□□ -1.2
CNOT9-206ENST00000473626 MLLT6P55198 1093 aaPredicted RBP7.56□□□□□ -1.2
CNOT9-206ENST00000473626 NFKB2Q00653 900 aa7.56□□□□□ -1.2
CNOT9-206ENST00000473626 ESRP1Q6NXG1 681 aaKnown RBP7.56□□□□□ -1.2
CNOT9-206ENST00000473626 CC2D1AQ6P1N0 951 aaPredicted RBP7.56□□□□□ -1.2
CNOT9-206ENST00000473626 C1QL4Q86Z23 238 aa7.56□□□□□ -1.2
CNOT9-206ENST00000473626 STPG3Q8N7X2 389 aa7.56□□□□□ -1.2
CNOT9-206ENST00000473626 TP53I13Q8NBR0 393 aaPredicted RBP7.56□□□□□ -1.2
CNOT9-206ENST00000473626 USP7Q93009 1102 aa7.56□□□□□ -1.2
CNOT9-206ENST00000473626 AMNQ9BXJ7 453 aa7.56□□□□□ -1.2
CNOT9-206ENST00000473626 DLL4Q9NR61 685 aa7.56□□□□□ -1.2
CNOT9-206ENST00000473626 ARHGAP20Q9P2F6 1191 aa7.56□□□□□ -1.2
CNOT9-206ENST00000473626 ZFP69BQ9UJL9 534 aa7.56□□□□□ -1.2
CNOT9-206ENST00000473626 PTGS1P23219 599 aa7.55□□□□□ -1.2
CNOT9-206ENST00000473626 HERVK_113P62684 666 aa7.55□□□□□ -1.2
CNOT9-206ENST00000473626 CIAPIN1Q6FI81 312 aa7.55□□□□□ -1.2
CNOT9-206ENST00000473626 SAPCD2Q86UD0 394 aa7.55□□□□□ -1.2
CNOT9-206ENST00000473626 LRRC56Q8IYG6 542 aaPredicted RBP7.55□□□□□ -1.2
CNOT9-206ENST00000473626 FOXRED1Q96CU9 486 aaPredicted RBP7.55□□□□□ -1.2
CNOT9-206ENST00000473626 CLIC6Q96NY7 704 aa7.55□□□□□ -1.2
CNOT9-206ENST00000473626 TMEM209Q96SK2 561 aa7.55□□□□□ -1.2
CNOT9-206ENST00000473626 EMC7Q9NPA0 242 aa7.55□□□□□ -1.2
CNOT9-206ENST00000473626 SPO11Q9Y5K1 396 aa7.55□□□□□ -1.2
CNOT9-206ENST00000473626 PEG3Q9GZU2 1588 aa7.54□□□□□ -1.2
CNOT9-206ENST00000473626 ARHGEF11O15085 1522 aa7.54□□□□□ -1.2
CNOT9-206ENST00000473626 BPIP17213 487 aa7.54□□□□□ -1.2
CNOT9-206ENST00000473626 AMPD3Q01432 767 aa7.54□□□□□ -1.2
CNOT9-206ENST00000473626 DHCR24Q15392 516 aa7.54□□□□□ -1.2
CNOT9-206ENST00000473626 PRR31Q5SQ13 230 aa7.54□□□□□ -1.2
CNOT9-206ENST00000473626 RTN4RL1Q86UN2 441 aaPredicted RBP7.54□□□□□ -1.2
CNOT9-206ENST00000473626 IGDCC4Q8TDY8 1250 aa7.54□□□□□ -1.2
CNOT9-206ENST00000473626 RTF1Q92541 710 aaKnown RBP7.54□□□□□ -1.2
CNOT9-206ENST00000473626 GPATCH3Q96I76 525 aa7.54□□□□□ -1.2
CNOT9-206ENST00000473626 DBX1A6NMT0 343 aa7.53□□□□□ -1.2
CNOT9-206ENST00000473626 GOLGA6L22H0YM25 854 aa7.53□□□□□ -1.2
CNOT9-206ENST00000473626 DDX3XO00571 662 aaKnown RBP eCLIP7.53□□□□□ -1.2
CNOT9-206ENST00000473626 EYA4O95677 639 aa7.53□□□□□ -1.2
CNOT9-206ENST00000473626 LSSP48449 732 aa7.53□□□□□ -1.2
CNOT9-206ENST00000473626 TTLL6Q8N841 843 aa7.53□□□□□ -1.2
CNOT9-206ENST00000473626 ZCCHC14Q8WYQ9 949 aaKnown RBP7.53□□□□□ -1.2
CNOT9-206ENST00000473626 ZMAT4Q9H898 229 aa7.53□□□□□ -1.2
CNOT9-206ENST00000473626 INCENPQ9NQS7 918 aa7.53□□□□□ -1.2
CNOT9-206ENST00000473626 ACSS2Q9NR19 701 aa7.53□□□□□ -1.2
CNOT9-206ENST00000473626 EVA1CP58658 441 aa7.52□□□□□ -1.21
CNOT9-206ENST00000473626 DDX42Q86XP3 938 aaKnown RBP eCLIP7.52□□□□□ -1.21
CNOT9-206ENST00000473626 EFHBQ8N7U6 833 aa7.52□□□□□ -1.21
CNOT9-206ENST00000473626 C16orf92Q96LL3 132 aa7.52□□□□□ -1.21
CNOT9-206ENST00000473626 TTC1Q99614 292 aa7.52□□□□□ -1.21
CNOT9-206ENST00000473626 SPATA25Q9BR10 227 aa7.52□□□□□ -1.21
CNOT9-206ENST00000473626 SEMA4AQ9H3S1 761 aa7.52□□□□□ -1.21
CNOT9-206ENST00000473626 IFT22Q9H7X7 185 aa7.52□□□□□ -1.21
CNOT9-206ENST00000473626 PCDH18Q9HCL0 1135 aa7.52□□□□□ -1.21
CNOT9-206ENST00000473626 KCND1Q9NSA2 647 aa7.52□□□□□ -1.21
CNOT9-206ENST00000473626 GALNT8Q9NY28 637 aa7.52□□□□□ -1.21
CNOT9-206ENST00000473626 ASB1Q9Y576 335 aa7.52□□□□□ -1.21
CNOT9-206ENST00000473626 FBXO21O94952 628 aa7.51□□□□□ -1.21
CNOT9-206ENST00000473626 COL6A1P12109 1028 aa7.51□□□□□ -1.21
CNOT9-206ENST00000473626 IL13P35225 146 aa7.51□□□□□ -1.21
CNOT9-206ENST00000473626 IL13RA1P78552 427 aa7.51□□□□□ -1.21
CNOT9-206ENST00000473626 SMAD3P84022 425 aaKnown RBP7.51□□□□□ -1.21
CNOT9-206ENST00000473626 TMPRSS15P98073 1019 aa7.51□□□□□ -1.21
CNOT9-206ENST00000473626 STAT4Q14765 748 aa7.51□□□□□ -1.21
CNOT9-206ENST00000473626 SMAD2Q15796 467 aaKnown RBP7.51□□□□□ -1.21
CNOT9-206ENST00000473626 ATP13A4Q4VNC1 1196 aa7.51□□□□□ -1.21
CNOT9-206ENST00000473626 TCERG1LQ5VWI1 586 aa7.51□□□□□ -1.21
CNOT9-206ENST00000473626 TRMT10BQ6PF06 316 aaKnown RBP7.51□□□□□ -1.21
CNOT9-206ENST00000473626 ATL2Q8NHH9 583 aa7.51□□□□□ -1.21
CNOT9-206ENST00000473626 TOX2Q96NM4 488 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms