RNA–Protein interactions for RNA: ENST00000473373.1

CPNE1-222, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 821 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-222ENST00000473373 TRIM71Q2Q1W2 868 aaKnown RBP13.03□□□□□ -0.32
CPNE1-222ENST00000473373 ZNF746Q6NUN9 644 aaPredicted RBP13.03□□□□□ -0.32
CPNE1-222ENST00000473373 PLPPR4Q7Z2D5 763 aa13.03□□□□□ -0.32
CPNE1-222ENST00000473373 SMAP1Q8IYB5 467 aaPredicted RBP13.03□□□□□ -0.32
CPNE1-222ENST00000473373 MYOCDQ8IZQ8 938 aa13.03□□□□□ -0.32
CPNE1-222ENST00000473373 DAGLBQ8NCG7 672 aa13.03□□□□□ -0.32
CPNE1-222ENST00000473373 PHOSPHO2Q8TCD6 241 aa13.03□□□□□ -0.32
CPNE1-222ENST00000473373 TRAPPC12Q8WVT3 735 aa13.03□□□□□ -0.32
CPNE1-222ENST00000473373 GABBR1Q9UBS5 961 aa13.03□□□□□ -0.32
CPNE1-222ENST00000473373 DDX25Q9UHL0 483 aaKnown RBP13.03□□□□□ -0.32
CPNE1-222ENST00000473373 GINS2Q9Y248 185 aa13.03□□□□□ -0.32
CPNE1-222ENST00000473373 PCDHA11Q9Y5I1 949 aa13.03□□□□□ -0.32
CPNE1-222ENST00000473373 CCNT1O60563 726 aaKnown RBP13.02□□□□□ -0.33
CPNE1-222ENST00000473373 LARGE1O95461 756 aa13.02□□□□□ -0.33
CPNE1-222ENST00000473373 TDP2O95551 362 aa13.02□□□□□ -0.33
CPNE1-222ENST00000473373 RPLP2P05387 115 aaKnown RBP13.02□□□□□ -0.33
CPNE1-222ENST00000473373 MYOGP15173 224 aa13.02□□□□□ -0.33
CPNE1-222ENST00000473373 CIITAP33076 1130 aa13.02□□□□□ -0.33
CPNE1-222ENST00000473373 TMEM62Q0P6H9 643 aa13.02□□□□□ -0.33
CPNE1-222ENST00000473373 IER5Q5VY09 327 aa13.02□□□□□ -0.33
CPNE1-222ENST00000473373 RUFY4Q6ZNE9 571 aa13.02□□□□□ -0.33
CPNE1-222ENST00000473373 PIK3AP1Q6ZUJ8 805 aa13.02□□□□□ -0.33
CPNE1-222ENST00000473373 MIER3Q7Z3K6 550 aa13.02□□□□□ -0.33
CPNE1-222ENST00000473373 HERC6Q8IVU3 1022 aa13.02□□□□□ -0.33
CPNE1-222ENST00000473373 CCDC60Q8IWA6 550 aaPredicted RBP13.02□□□□□ -0.33
CPNE1-222ENST00000473373 CCDC83Q8IWF9 413 aa13.02□□□□□ -0.33
CPNE1-222ENST00000473373 MICALL1Q8N3F8 863 aa13.02□□□□□ -0.33
CPNE1-222ENST00000473373 FAM184AQ8NB25 1140 aa13.02□□□□□ -0.33
CPNE1-222ENST00000473373 DBF4BQ8NFT6 615 aa13.02□□□□□ -0.33
CPNE1-222ENST00000473373 ADAMTS19Q8TE59 1207 aa13.02□□□□□ -0.33
CPNE1-222ENST00000473373 ATXN2LQ8WWM7 1075 aaKnown RBP13.02□□□□□ -0.33
CPNE1-222ENST00000473373 ASB2Q96Q27 587 aa13.02□□□□□ -0.33
CPNE1-222ENST00000473373 PCYT2Q99447 389 aa13.02□□□□□ -0.33
CPNE1-222ENST00000473373 NAP1L4Q99733 375 aaKnown RBP13.02□□□□□ -0.33
CPNE1-222ENST00000473373 PHF20Q9BVI0 1012 aa13.02□□□□□ -0.33
CPNE1-222ENST00000473373 IFIH1Q9BYX4 1025 aaKnown RBP13.02□□□□□ -0.33
CPNE1-222ENST00000473373 LIMCH1Q9UPQ0 1083 aa13.02□□□□□ -0.33
CPNE1-222ENST00000473373 YBX2Q9Y2T7 364 aaKnown RBP13.02□□□□□ -0.33
CPNE1-222ENST00000473373 PCDHA10Q9Y5I2 948 aa13.02□□□□□ -0.33
CPNE1-222ENST00000473373 MSH4O15457 936 aa13.01□□□□□ -0.33
CPNE1-222ENST00000473373 UPP2O95045 317 aa13.01□□□□□ -0.33
CPNE1-222ENST00000473373 CCNE2O96020 404 aa13.01□□□□□ -0.33
CPNE1-222ENST00000473373 CXCL10P02778 98 aa13.01□□□□□ -0.33
CPNE1-222ENST00000473373 CA3P07451 260 aa13.01□□□□□ -0.33
CPNE1-222ENST00000473373 GHRP10912 638 aa13.01□□□□□ -0.33
CPNE1-222ENST00000473373 IBSPP21815 317 aaPredicted RBP13.01□□□□□ -0.33
CPNE1-222ENST00000473373 HOXC8P31273 242 aa13.01□□□□□ -0.33
CPNE1-222ENST00000473373 JAK3P52333 1124 aa13.01□□□□□ -0.33
CPNE1-222ENST00000473373 MRPS6P82932 125 aaKnown RBP13.01□□□□□ -0.33
CPNE1-222ENST00000473373 SAFBQ15424 915 aaKnown RBP eCLIP13.01□□□□□ -0.33
CPNE1-222ENST00000473373 C8orf34Q49A92 452 aa13.01□□□□□ -0.33
CPNE1-222ENST00000473373 ABHD15Q6UXT9 468 aa13.01□□□□□ -0.33
CPNE1-222ENST00000473373 NEK8Q86SG6 692 aa13.01□□□□□ -0.33
CPNE1-222ENST00000473373 METTL13Q8N6R0 699 aa13.01□□□□□ -0.33
CPNE1-222ENST00000473373 CRYGNQ8WXF5 182 aa13.01□□□□□ -0.33
CPNE1-222ENST00000473373 APBB2Q92870 758 aa13.01□□□□□ -0.33
CPNE1-222ENST00000473373 FAM167AQ96KS9 214 aa13.01□□□□□ -0.33
CPNE1-222ENST00000473373 SCLT1Q96NL6 688 aa13.01□□□□□ -0.33
CPNE1-222ENST00000473373 CERS4Q9HA82 394 aa13.01□□□□□ -0.33
CPNE1-222ENST00000473373 DISC1Q9NRI5 854 aa13.01□□□□□ -0.33
CPNE1-222ENST00000473373 THEGQ9P2T0 379 aa13.01□□□□□ -0.33
CPNE1-222ENST00000473373 CEP131Q9UPN4 1083 aa13.01□□□□□ -0.33
CPNE1-222ENST00000473373 CDY2AQ9Y6F7 541 aa13.01□□□□□ -0.33
CPNE1-222ENST00000473373 COL1A2P08123 1366 aa13□□□□□ -0.33
CPNE1-222ENST00000473373 ST18O60284 1047 aa13□□□□□ -0.33
CPNE1-222ENST00000473373 ATG7O95352 703 aa13□□□□□ -0.33
CPNE1-222ENST00000473373 BAG4O95429 457 aaKnown RBP13□□□□□ -0.33
CPNE1-222ENST00000473373 ATXN8OSP0DMR3 200 aa13□□□□□ -0.33
CPNE1-222ENST00000473373 KLRC1P26715 233 aa13□□□□□ -0.33
CPNE1-222ENST00000473373 SFNP31947 248 aa13□□□□□ -0.33
CPNE1-222ENST00000473373 DEFB103AP81534 67 aa13□□□□□ -0.33
CPNE1-222ENST00000473373 MRPS5P82675 430 aaKnown RBP13□□□□□ -0.33
CPNE1-222ENST00000473373 PLEKHG4Q58EX7 1191 aa13□□□□□ -0.33
CPNE1-222ENST00000473373 ZNF484Q5JVG2 852 aa13□□□□□ -0.33
CPNE1-222ENST00000473373 TMCO2Q7Z6W1 182 aaPredicted RBP13□□□□□ -0.33
CPNE1-222ENST00000473373 NSUN7Q8NE18 718 aaKnown RBP13□□□□□ -0.33
CPNE1-222ENST00000473373 ATP8B4Q8TF62 1192 aa13□□□□□ -0.33
CPNE1-222ENST00000473373 BBXQ8WY36 941 aaPredicted RBP13□□□□□ -0.33
CPNE1-222ENST00000473373 ZBTB10Q96DT7 871 aa13□□□□□ -0.33
CPNE1-222ENST00000473373 ZSCAN31Q96LW9 406 aaPredicted RBP13□□□□□ -0.33
CPNE1-222ENST00000473373 RIT2Q99578 217 aa13□□□□□ -0.33
CPNE1-222ENST00000473373 NRBP2Q9NSY0 501 aa13□□□□□ -0.33
CPNE1-222ENST00000473373 GJB4Q9NTQ9 266 aa13□□□□□ -0.33
CPNE1-222ENST00000473373 TRPV2Q9Y5S1 764 aa13□□□□□ -0.33
CPNE1-222ENST00000473373 TTC28Q96AY4 2481 aa13□□□□□ -0.33
CPNE1-222ENST00000473373 COL4A4P53420 1690 aaPredicted RBP12.99□□□□□ -0.33
CPNE1-222ENST00000473373 DHX15O43143 795 aaKnown RBP12.99□□□□□ -0.33
CPNE1-222ENST00000473373 GTPBP6O43824 516 aaPredicted RBP12.99□□□□□ -0.33
CPNE1-222ENST00000473373 JAK2O60674 1132 aa12.99□□□□□ -0.33
CPNE1-222ENST00000473373 CTDNEP1O95476 244 aa12.99□□□□□ -0.33
CPNE1-222ENST00000473373 GCFC2P16383 781 aaKnown RBP12.99□□□□□ -0.33
CPNE1-222ENST00000473373 ADAM17P78536 824 aa12.99□□□□□ -0.33
CPNE1-222ENST00000473373 GUCY1B3Q02153 619 aa12.99□□□□□ -0.33
CPNE1-222ENST00000473373 MBTPS1Q14703 1052 aa12.99□□□□□ -0.33
CPNE1-222ENST00000473373 Q4G0T1 1027 aa12.99□□□□□ -0.33
CPNE1-222ENST00000473373 MTHFD1LQ6UB35 978 aa12.99□□□□□ -0.33
CPNE1-222ENST00000473373 MOXD1Q6UVY6 613 aa12.99□□□□□ -0.33
CPNE1-222ENST00000473373 ARNTL2Q8WYA1 636 aa12.99□□□□□ -0.33
CPNE1-222ENST00000473373 GJA10Q969M2 543 aa12.99□□□□□ -0.33
CPNE1-222ENST00000473373 MAP7D2Q96T17 732 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms