RNA–Protein interactions for RNA: ENST00000473191.1

USP40-212, Transcript of ubiquitin specific peptidase 40, humanhuman

TSL 3

Gene USP40, Length 590 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP40-212ENST00000473191 TCF20Q9UGU0 1960 aaKnown RBP18.95■□□□□ 0.62
USP40-212ENST00000473191 RRN3P2A6NIE6 340 aa18.95■□□□□ 0.62
USP40-212ENST00000473191 ZBTB42B2RXF5 422 aa18.95■□□□□ 0.62
USP40-212ENST00000473191 ENPP3O14638 875 aa18.95■□□□□ 0.62
USP40-212ENST00000473191 CD52P31358 61 aa18.95■□□□□ 0.62
USP40-212ENST00000473191 MRPS5P82675 430 aaKnown RBP18.95■□□□□ 0.62
USP40-212ENST00000473191 AKAP17AQ02040 695 aaKnown RBP18.95■□□□□ 0.62
USP40-212ENST00000473191 MTHFD1LQ6UB35 978 aa18.95■□□□□ 0.62
USP40-212ENST00000473191 RTN4RL1Q86UN2 441 aaPredicted RBP18.95■□□□□ 0.62
USP40-212ENST00000473191 APBB2Q92870 758 aa18.95■□□□□ 0.62
USP40-212ENST00000473191 YME1L1Q96TA2 773 aa18.95■□□□□ 0.62
USP40-212ENST00000473191 CDHR5Q9HBB8 845 aa18.95■□□□□ 0.62
USP40-212ENST00000473191 PCDHA2Q9Y5H9 948 aa18.95■□□□□ 0.62
USP40-212ENST00000473191 BACH1O14867 736 aa18.94■□□□□ 0.62
USP40-212ENST00000473191 NEFLP07196 543 aa18.94■□□□□ 0.62
USP40-212ENST00000473191 LINC00271P0C7V0 271 aa18.94■□□□□ 0.62
USP40-212ENST00000473191 GNA11P29992 359 aa18.94■□□□□ 0.62
USP40-212ENST00000473191 NPY5RQ15761 445 aa18.94■□□□□ 0.62
USP40-212ENST00000473191 EPC2Q52LR7 807 aa18.94■□□□□ 0.62
USP40-212ENST00000473191 ADAMTS19Q8TE59 1207 aa18.94■□□□□ 0.62
USP40-212ENST00000473191 CCDC12Q8WUD4 166 aaPredicted RBP18.94■□□□□ 0.62
USP40-212ENST00000473191 PPP1R16BQ96T49 567 aa18.94■□□□□ 0.62
USP40-212ENST00000473191 ZNF302Q9NR11 478 aa18.94■□□□□ 0.62
USP40-212ENST00000473191 NLRC5Q86WI3 1866 aa18.93■□□□□ 0.62
USP40-212ENST00000473191 EPB41L2O43491 1005 aaKnown RBP18.93■□□□□ 0.62
USP40-212ENST00000473191 BMP1P13497 986 aa18.93■□□□□ 0.62
USP40-212ENST00000473191 KLRC1P26715 233 aa18.93■□□□□ 0.62
USP40-212ENST00000473191 CIITAP33076 1130 aa18.93■□□□□ 0.62
USP40-212ENST00000473191 TMEM266Q2M3C6 531 aa18.93■□□□□ 0.62
USP40-212ENST00000473191 PDXDC2PQ6P474 469 aa18.93■□□□□ 0.62
USP40-212ENST00000473191 TSHZ1Q6ZSZ6 1077 aa18.93■□□□□ 0.62
USP40-212ENST00000473191 RSPH3Q86UC2 560 aa18.93■□□□□ 0.62
USP40-212ENST00000473191 FBXO22Q8NEZ5 403 aa18.93■□□□□ 0.62
USP40-212ENST00000473191 ATP8B4Q8TF62 1192 aa18.93■□□□□ 0.62
USP40-212ENST00000473191 SYMPKQ92797 1274 aaKnown RBP18.93■□□□□ 0.62
USP40-212ENST00000473191 TM6SF1Q9BZW5 370 aa18.93■□□□□ 0.62
USP40-212ENST00000473191 RC3H2Q9HBD1 1191 aaKnown RBP18.93■□□□□ 0.62
USP40-212ENST00000473191 PDRG1Q9NUG6 133 aa18.93■□□□□ 0.62
USP40-212ENST00000473191 TRPV2Q9Y5S1 764 aa18.93■□□□□ 0.62
USP40-212ENST00000473191 SMIM35A0A1B0GVV1 85 aa18.92■□□□□ 0.62
USP40-212ENST00000473191 M0R2N6 131 aa18.92■□□□□ 0.62
USP40-212ENST00000473191 MSH4O15457 936 aa18.92■□□□□ 0.62
USP40-212ENST00000473191 NLRP5P59047 1200 aa18.92■□□□□ 0.62
USP40-212ENST00000473191 SSRP1Q08945 709 aaKnown RBP18.92■□□□□ 0.62
USP40-212ENST00000473191 SCRN1Q12765 414 aa18.92■□□□□ 0.62
USP40-212ENST00000473191 MIS18BP1Q6P0N0 1132 aa18.92■□□□□ 0.62
USP40-212ENST00000473191 TMEM40Q8WWA1 233 aa18.92■□□□□ 0.62
USP40-212ENST00000473191 ZNF274Q96GC6 653 aaPredicted RBP18.92■□□□□ 0.62
USP40-212ENST00000473191 TMX1Q9H3N1 280 aa18.92■□□□□ 0.62
USP40-212ENST00000473191 GJB4Q9NTQ9 266 aa18.92■□□□□ 0.62
USP40-212ENST00000473191 PADI3Q9ULW8 664 aa18.92■□□□□ 0.62
USP40-212ENST00000473191 MAFBQ9Y5Q3 323 aaPredicted RBP18.92■□□□□ 0.62
USP40-212ENST00000473191 HBP1O60381 514 aa18.91■□□□□ 0.62
USP40-212ENST00000473191 SETQ01105 290 aaPredicted RBP18.91■□□□□ 0.62
USP40-212ENST00000473191 IER5Q5VY09 327 aa18.91■□□□□ 0.62
USP40-212ENST00000473191 KIAA0319LQ8IZA0 1049 aa18.91■□□□□ 0.62
USP40-212ENST00000473191 CCDC148Q8NFR7 591 aa18.91■□□□□ 0.62
USP40-212ENST00000473191 TBCKQ8TEA7 893 aa18.91■□□□□ 0.62
USP40-212ENST00000473191 CELF4Q9BZC1 486 aaKnown RBP18.91■□□□□ 0.62
USP40-212ENST00000473191 PPP4R2Q9NY27 417 aa18.91■□□□□ 0.62
USP40-212ENST00000473191 GABBR1Q9UBS5 961 aa18.91■□□□□ 0.62
USP40-212ENST00000473191 TPCN1Q9ULQ1 816 aa18.91■□□□□ 0.62
USP40-212ENST00000473191 PCDHA4Q9UN74 947 aa18.91■□□□□ 0.62
USP40-212ENST00000473191 KCNJ14Q9UNX9 436 aa18.91■□□□□ 0.62
USP40-212ENST00000473191 GINS2Q9Y248 185 aa18.91■□□□□ 0.62
USP40-212ENST00000473191 IGSF9BQ9UPX0 1349 aa18.91■□□□□ 0.62
USP40-212ENST00000473191 ATG2AQ2TAZ0 1938 aa18.9■□□□□ 0.62
USP40-212ENST00000473191 WDR81Q562E7 1941 aa18.9■□□□□ 0.62
USP40-212ENST00000473191 TDP2O95551 362 aa18.9■□□□□ 0.62
USP40-212ENST00000473191 GATMP50440 423 aa18.9■□□□□ 0.62
USP40-212ENST00000473191 UGCGQ16739 394 aa18.9■□□□□ 0.62
USP40-212ENST00000473191 FAM160B1Q5W0V3 765 aa18.9■□□□□ 0.62
USP40-212ENST00000473191 ZNF746Q6NUN9 644 aaPredicted RBP18.9■□□□□ 0.62
USP40-212ENST00000473191 TMEM192Q8IY95 271 aa18.9■□□□□ 0.62
USP40-212ENST00000473191 CRIPAKQ8N1N5 446 aa18.9■□□□□ 0.62
USP40-212ENST00000473191 SH3GLB2Q9NR46 395 aa18.9■□□□□ 0.62
USP40-212ENST00000473191 TBC1D22BQ9NU19 505 aa18.9■□□□□ 0.62
USP40-212ENST00000473191 EVPLQ92817 2033 aa18.9■□□□□ 0.62
USP40-212ENST00000473191 CUL9Q8IWT3 2517 aa18.89■□□□□ 0.61
USP40-212ENST00000473191 TNFRSF10AO00220 468 aa18.89■□□□□ 0.61
USP40-212ENST00000473191 CHMP2AO43633 222 aa18.89■□□□□ 0.61
USP40-212ENST00000473191 ZNF862O60290 1169 aa18.89■□□□□ 0.61
USP40-212ENST00000473191 MGEA5O60502 916 aa18.89■□□□□ 0.61
USP40-212ENST00000473191 C22orf31O95567 290 aa18.89■□□□□ 0.61
USP40-212ENST00000473191 SLC26A2P50443 739 aa18.89■□□□□ 0.61
USP40-212ENST00000473191 KRT76Q01546 638 aa18.89■□□□□ 0.61
USP40-212ENST00000473191 CKAP2LQ8IYA6 745 aa18.89■□□□□ 0.61
USP40-212ENST00000473191 BICD2Q8TD16 824 aa18.89■□□□□ 0.61
USP40-212ENST00000473191 ZNF689Q96CS4 500 aaPredicted RBP18.89■□□□□ 0.61
USP40-212ENST00000473191 IL17RAQ96F46 866 aa18.89■□□□□ 0.61
USP40-212ENST00000473191 UHRF1Q96T88 793 aaPredicted RBP18.89■□□□□ 0.61
USP40-212ENST00000473191 TSPYL2Q9H2G4 693 aaPredicted RBP18.89■□□□□ 0.61
USP40-212ENST00000473191 UNC45AQ9H3U1 944 aa18.89■□□□□ 0.61
USP40-212ENST00000473191 NOC2LQ9Y3T9 749 aaKnown RBP18.89■□□□□ 0.61
USP40-212ENST00000473191 TTC3P53804 2025 aa18.88■□□□□ 0.61
USP40-212ENST00000473191 H3BNC9 293 aa18.88■□□□□ 0.61
USP40-212ENST00000473191 CPLX1O14810 134 aa18.88■□□□□ 0.61
USP40-212ENST00000473191 DGKIO75912 1065 aa18.88■□□□□ 0.61
USP40-212ENST00000473191 DEXIO95424 95 aa18.88■□□□□ 0.61
USP40-212ENST00000473191 CTDNEP1O95476 244 aa18.88■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms