RNA–Protein interactions for RNA: ENST00000473066.5

MRPL55-226, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 3

Gene MRPL55, Length 820 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-226ENST00000473066 DNAJB3Q8WWF6 145 aa17.63■□□□□ 0.41
MRPL55-226ENST00000473066 FAM167AQ96KS9 214 aa17.63■□□□□ 0.41
MRPL55-226ENST00000473066 NAP1L4Q99733 375 aaKnown RBP17.63■□□□□ 0.41
MRPL55-226ENST00000473066 IFIH1Q9BYX4 1025 aaKnown RBP17.63■□□□□ 0.41
MRPL55-226ENST00000473066 PRDM12Q9H4Q4 367 aa17.63■□□□□ 0.41
MRPL55-226ENST00000473066 UPF2Q9HAU5 1272 aaKnown RBP17.63■□□□□ 0.41
MRPL55-226ENST00000473066 CHMP2AO43633 222 aa17.62■□□□□ 0.41
MRPL55-226ENST00000473066 CTDNEP1O95476 244 aa17.62■□□□□ 0.41
MRPL55-226ENST00000473066 TDP2O95551 362 aa17.62■□□□□ 0.41
MRPL55-226ENST00000473066 SFNP31947 248 aa17.62■□□□□ 0.41
MRPL55-226ENST00000473066 KRT2P35908 639 aa17.62■□□□□ 0.41
MRPL55-226ENST00000473066 MRPS6P82932 125 aaKnown RBP17.62■□□□□ 0.41
MRPL55-226ENST00000473066 NPY5RQ15761 445 aa17.62■□□□□ 0.41
MRPL55-226ENST00000473066 LETM2Q2VYF4 491 aa17.62■□□□□ 0.41
MRPL55-226ENST00000473066 Q4G0T1 1027 aa17.62■□□□□ 0.41
MRPL55-226ENST00000473066 ZNF484Q5JVG2 852 aa17.62■□□□□ 0.41
MRPL55-226ENST00000473066 IER5Q5VY09 327 aa17.62■□□□□ 0.41
MRPL55-226ENST00000473066 MYOCDQ8IZQ8 938 aa17.62■□□□□ 0.41
MRPL55-226ENST00000473066 SLC17A8Q8NDX2 589 aa17.62■□□□□ 0.41
MRPL55-226ENST00000473066 TRAPPC12Q8WVT3 735 aa17.62■□□□□ 0.41
MRPL55-226ENST00000473066 SLC5A5Q92911 643 aa17.62■□□□□ 0.41
MRPL55-226ENST00000473066 GABBR1Q9UBS5 961 aa17.62■□□□□ 0.41
MRPL55-226ENST00000473066 DDX25Q9UHL0 483 aaKnown RBP17.62■□□□□ 0.41
MRPL55-226ENST00000473066 CEP131Q9UPN4 1083 aa17.62■□□□□ 0.41
MRPL55-226ENST00000473066 PCDHA2Q9Y5H9 948 aa17.62■□□□□ 0.41
MRPL55-226ENST00000473066 CDY2AQ9Y6F7 541 aa17.62■□□□□ 0.41
MRPL55-226ENST00000473066 COL4A4P53420 1690 aaPredicted RBP17.61■□□□□ 0.41
MRPL55-226ENST00000473066 LAMA2P24043 3122 aaKnown RBP17.61■□□□□ 0.41
MRPL55-226ENST00000473066 NLRC5Q86WI3 1866 aa17.61■□□□□ 0.41
MRPL55-226ENST00000473066 M0R2N6 131 aa17.61■□□□□ 0.41
MRPL55-226ENST00000473066 GHRP10912 638 aa17.61■□□□□ 0.41
MRPL55-226ENST00000473066 GCFC2P16383 781 aaKnown RBP17.61■□□□□ 0.41
MRPL55-226ENST00000473066 MARCH8Q5T0T0 291 aa17.61■□□□□ 0.41
MRPL55-226ENST00000473066 FAM117BQ6P1L5 589 aa17.61■□□□□ 0.41
MRPL55-226ENST00000473066 NEK8Q86SG6 692 aa17.61■□□□□ 0.41
MRPL55-226ENST00000473066 NSUN7Q8NE18 718 aaKnown RBP17.61■□□□□ 0.41
MRPL55-226ENST00000473066 BBXQ8WY36 941 aaPredicted RBP17.61■□□□□ 0.41
MRPL55-226ENST00000473066 DISC1Q9NRI5 854 aa17.61■□□□□ 0.41
MRPL55-226ENST00000473066 LIMCH1Q9UPQ0 1083 aa17.61■□□□□ 0.41
MRPL55-226ENST00000473066 TRPV2Q9Y5S1 764 aa17.61■□□□□ 0.41
MRPL55-226ENST00000473066 IGSF9BQ9UPX0 1349 aa17.61■□□□□ 0.41
MRPL55-226ENST00000473066 CYP3A7-CYP3A51PA0A087WV96 503 aa17.6■□□□□ 0.41
MRPL55-226ENST00000473066 SMIM35A0A1B0GVV1 85 aa17.6■□□□□ 0.41
MRPL55-226ENST00000473066 MARCH6O60337 910 aa17.6■□□□□ 0.41
MRPL55-226ENST00000473066 DTNBO60941 627 aa17.6■□□□□ 0.41
MRPL55-226ENST00000473066 GJB5O95377 273 aa17.6■□□□□ 0.41
MRPL55-226ENST00000473066 CYP3A7P24462 503 aa17.6■□□□□ 0.41
MRPL55-226ENST00000473066 TCTN1Q2MV58 587 aa17.6■□□□□ 0.41
MRPL55-226ENST00000473066 MTHFD1LQ6UB35 978 aa17.6■□□□□ 0.41
MRPL55-226ENST00000473066 PIK3AP1Q6ZUJ8 805 aa17.6■□□□□ 0.41
MRPL55-226ENST00000473066 TRMT1LQ7Z2T5 733 aaKnown RBP17.6■□□□□ 0.41
MRPL55-226ENST00000473066 MIER3Q7Z3K6 550 aa17.6■□□□□ 0.41
MRPL55-226ENST00000473066 RDM1Q8NG50 284 aa17.6■□□□□ 0.41
MRPL55-226ENST00000473066 MAFBQ9Y5Q3 323 aaPredicted RBP17.6■□□□□ 0.41
MRPL55-226ENST00000473066 CHRNA1P02708 482 aa17.59■□□□□ 0.41
MRPL55-226ENST00000473066 IGFBP4P22692 258 aa17.59■□□□□ 0.41
MRPL55-226ENST00000473066 KLRC1P26715 233 aa17.59■□□□□ 0.41
MRPL55-226ENST00000473066 FOSBP53539 338 aa17.59■□□□□ 0.41
MRPL55-226ENST00000473066 MGAT3Q09327 533 aa17.59■□□□□ 0.41
MRPL55-226ENST00000473066 TSHZ1Q6ZSZ6 1077 aa17.59■□□□□ 0.41
MRPL55-226ENST00000473066 ZBTB10Q96DT7 871 aa17.59■□□□□ 0.41
MRPL55-226ENST00000473066 ZSCAN31Q96LW9 406 aaPredicted RBP17.59■□□□□ 0.41
MRPL55-226ENST00000473066 RAD9AQ99638 391 aa17.59■□□□□ 0.41
MRPL55-226ENST00000473066 UNC45AQ9H3U1 944 aa17.59■□□□□ 0.41
MRPL55-226ENST00000473066 GJB4Q9NTQ9 266 aa17.59■□□□□ 0.41
MRPL55-226ENST00000473066 RALGAPA2Q2PPJ7 1873 aa17.58■□□□□ 0.41
MRPL55-226ENST00000473066 CCNT1O60563 726 aaKnown RBP17.58■□□□□ 0.4
MRPL55-226ENST00000473066 JAK2O60674 1132 aa17.58■□□□□ 0.4
MRPL55-226ENST00000473066 OATP04181 439 aa17.58■□□□□ 0.4
MRPL55-226ENST00000473066 PRKCEQ02156 737 aa17.58■□□□□ 0.4
MRPL55-226ENST00000473066 TMEM62Q0P6H9 643 aa17.58■□□□□ 0.4
MRPL55-226ENST00000473066 LPIN1Q14693 890 aa17.58■□□□□ 0.4
MRPL55-226ENST00000473066 SAFBQ15424 915 aaKnown RBP eCLIP17.58■□□□□ 0.4
MRPL55-226ENST00000473066 FBXO47Q5MNV8 452 aa17.58■□□□□ 0.4
MRPL55-226ENST00000473066 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.58■□□□□ 0.4
MRPL55-226ENST00000473066 TMCO2Q7Z6W1 182 aaPredicted RBP17.58■□□□□ 0.4
MRPL55-226ENST00000473066 CCDC83Q8IWF9 413 aa17.58■□□□□ 0.4
MRPL55-226ENST00000473066 NME8Q8N427 588 aa17.58■□□□□ 0.4
MRPL55-226ENST00000473066 USP38Q8NB14 1042 aa17.58■□□□□ 0.4
MRPL55-226ENST00000473066 MBOAT7Q96N66 472 aa17.58■□□□□ 0.4
MRPL55-226ENST00000473066 NRBP2Q9NSY0 501 aa17.58■□□□□ 0.4
MRPL55-226ENST00000473066 GTPBP6O43824 516 aaPredicted RBP17.57■□□□□ 0.4
MRPL55-226ENST00000473066 EDIL3O43854 480 aa17.57■□□□□ 0.4
MRPL55-226ENST00000473066 PSMD10O75832 226 aa17.57■□□□□ 0.4
MRPL55-226ENST00000473066 FDPSP14324 419 aaKnown RBP17.57■□□□□ 0.4
MRPL55-226ENST00000473066 TAP1Q03518 808 aa17.57■□□□□ 0.4
MRPL55-226ENST00000473066 PPP4R3AQ6IN85 833 aa17.57■□□□□ 0.4
MRPL55-226ENST00000473066 ETNPPLQ8TBG4 499 aa17.57■□□□□ 0.4
MRPL55-226ENST00000473066 OXER1Q8TDS5 423 aa17.57■□□□□ 0.4
MRPL55-226ENST00000473066 ARNTL2Q8WYA1 636 aa17.57■□□□□ 0.4
MRPL55-226ENST00000473066 MAP7D2Q96T17 732 aa17.57■□□□□ 0.4
MRPL55-226ENST00000473066 YME1L1Q96TA2 773 aa17.57■□□□□ 0.4
MRPL55-226ENST00000473066 CELF4Q9BZC1 486 aaKnown RBP17.57■□□□□ 0.4
MRPL55-226ENST00000473066 CERS4Q9HA82 394 aa17.57■□□□□ 0.4
MRPL55-226ENST00000473066 SH2B1Q9NRF2 756 aaPredicted RBP17.57■□□□□ 0.4
MRPL55-226ENST00000473066 GINS2Q9Y248 185 aa17.57■□□□□ 0.4
MRPL55-226ENST00000473066 INSL6Q9Y581 213 aa17.57■□□□□ 0.4
MRPL55-226ENST00000473066 SQORQ9Y6N5 450 aa17.57■□□□□ 0.4
MRPL55-226ENST00000473066 TTC3P53804 2025 aa17.57■□□□□ 0.4
MRPL55-226ENST00000473066 MAGEB2O15479 319 aa17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms