RNA–Protein interactions for RNA: ENST00000472991.5

SMC4-214, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-214ENST00000472991 SYT1P21579 422 aa10.3□□□□□ -0.76
SMC4-214ENST00000472991 U2AF2P26368 475 aaKnown RBP eCLIP10.3□□□□□ -0.761e-7■■■■■ 37.8
SMC4-214ENST00000472991 NKX3-2P78367 333 aa10.3□□□□□ -0.76
SMC4-214ENST00000472991 SP4Q02446 784 aa10.3□□□□□ -0.76
SMC4-214ENST00000472991 NEDD9Q14511 834 aa10.3□□□□□ -0.76
SMC4-214ENST00000472991 CELF3Q5SZQ8 465 aaKnown RBP10.3□□□□□ -0.76
SMC4-214ENST00000472991 MYSM1Q5VVJ2 828 aa10.3□□□□□ -0.76
SMC4-214ENST00000472991 MOXD1Q6UVY6 613 aa10.3□□□□□ -0.76
SMC4-214ENST00000472991 CYFIP1Q7L576 1253 aa10.3□□□□□ -0.76
SMC4-214ENST00000472991 AFG1LQ8WV93 481 aa10.3□□□□□ -0.76
SMC4-214ENST00000472991 PAWRQ96IZ0 340 aaKnown RBP10.3□□□□□ -0.76
SMC4-214ENST00000472991 SPATA33Q96N06 139 aa10.3□□□□□ -0.76
SMC4-214ENST00000472991 MBOAT7Q96N66 472 aa10.3□□□□□ -0.76
SMC4-214ENST00000472991 SENP7Q9BQF6 1050 aa10.3□□□□□ -0.76
SMC4-214ENST00000472991 MLXIPQ9HAP2 919 aa10.3□□□□□ -0.76
SMC4-214ENST00000472991 AGO4Q9HCK5 861 aaKnown RBP10.3□□□□□ -0.76
SMC4-214ENST00000472991 LOXHD1Q8IVV2 1947 aa10.3□□□□□ -0.76
SMC4-214ENST00000472991 CYP3A7-CYP3A51PA0A087WV96 503 aa10.29□□□□□ -0.76
SMC4-214ENST00000472991 A0A1W2PQ45 241 aaPredicted RBP10.29□□□□□ -0.76
SMC4-214ENST00000472991 A0A1W2PQY0 241 aa10.29□□□□□ -0.76
SMC4-214ENST00000472991 DDX39AO00148 427 aaKnown RBP10.29□□□□□ -0.76
SMC4-214ENST00000472991 MSH4O15457 936 aa10.29□□□□□ -0.76
SMC4-214ENST00000472991 ASGR1P07306 291 aa10.29□□□□□ -0.76
SMC4-214ENST00000472991 MYL3P08590 195 aa10.29□□□□□ -0.76
SMC4-214ENST00000472991 GCFC2P16383 781 aaKnown RBP10.29□□□□□ -0.76
SMC4-214ENST00000472991 ATP2B1P20020 1258 aa10.29□□□□□ -0.76
SMC4-214ENST00000472991 CYP3A7P24462 503 aa10.29□□□□□ -0.76
SMC4-214ENST00000472991 CPT1AP50416 773 aa10.29□□□□□ -0.76
SMC4-214ENST00000472991 ITGB3BPQ13352 177 aaPredicted RBP10.29□□□□□ -0.76
SMC4-214ENST00000472991 LAMC2Q13753 1193 aa10.29□□□□□ -0.76
SMC4-214ENST00000472991 KCNA10Q16322 511 aa10.29□□□□□ -0.76
SMC4-214ENST00000472991 HSDL1Q3SXM5 330 aa10.29□□□□□ -0.76
SMC4-214ENST00000472991 Q4G0T1 1027 aa10.29□□□□□ -0.76
SMC4-214ENST00000472991 BRDTQ58F21 947 aaPredicted RBP10.29□□□□□ -0.76
SMC4-214ENST00000472991 DESI1Q6ICB0 168 aa10.29□□□□□ -0.76
SMC4-214ENST00000472991 CCSAPQ6IQ19 270 aaPredicted RBP10.29□□□□□ -0.76
SMC4-214ENST00000472991 METTL7BQ6UX53 244 aa10.29□□□□□ -0.76
SMC4-214ENST00000472991 PCSK9Q8NBP7 692 aaKnown RBP10.29□□□□□ -0.76
SMC4-214ENST00000472991 GIMAP8Q8ND71 665 aaPredicted RBP10.29□□□□□ -0.76
SMC4-214ENST00000472991 GJA10Q969M2 543 aa10.29□□□□□ -0.76
SMC4-214ENST00000472991 FERMT2Q96AC1 680 aa10.29□□□□□ -0.76
SMC4-214ENST00000472991 SDF4Q9BRK5 362 aa10.29□□□□□ -0.76
SMC4-214ENST00000472991 ZNF577Q9BSK1 485 aa10.29□□□□□ -0.76
SMC4-214ENST00000472991 TSEN34Q9BSV6 310 aaKnown RBP10.29□□□□□ -0.76
SMC4-214ENST00000472991 DDX25Q9UHL0 483 aaKnown RBP10.29□□□□□ -0.76
SMC4-214ENST00000472991 NOL7Q9UMY1 257 aaKnown RBP10.29□□□□□ -0.76
SMC4-214ENST00000472991 TELO2Q9Y4R8 837 aa10.29□□□□□ -0.76
SMC4-214ENST00000472991 PDE4DIPQ5VU43 2346 aa10.29□□□□□ -0.76
SMC4-214ENST00000472991 NFASCO94856 1347 aa10.29□□□□□ -0.76
SMC4-214ENST00000472991 TNRC18O15417 2968 aaPredicted RBP10.28□□□□□ -0.76
SMC4-214ENST00000472991 A6NJR5 290 aa10.28□□□□□ -0.76
SMC4-214ENST00000472991 IPO5O00410 1097 aaKnown RBP10.28□□□□□ -0.76
SMC4-214ENST00000472991 NOP56O00567 594 aaKnown RBP10.28□□□□□ -0.76
SMC4-214ENST00000472991 STX6O43752 255 aa10.28□□□□□ -0.76
SMC4-214ENST00000472991 ZEB2O60315 1214 aa10.28□□□□□ -0.76
SMC4-214ENST00000472991 COL6A1P12109 1028 aa10.28□□□□□ -0.76
SMC4-214ENST00000472991 ACLYP53396 1101 aa10.28□□□□□ -0.76
SMC4-214ENST00000472991 PPP4R3AQ6IN85 833 aa10.28□□□□□ -0.76
SMC4-214ENST00000472991 CXCL17Q6UXB2 119 aa10.28□□□□□ -0.76
SMC4-214ENST00000472991 NECAB2Q7Z6G3 386 aa10.28□□□□□ -0.76
SMC4-214ENST00000472991 UBE2Q1Q7Z7E8 422 aa10.28□□□□□ -0.76
SMC4-214ENST00000472991 FERMT3Q86UX7 667 aa10.28□□□□□ -0.76
SMC4-214ENST00000472991 PPTC7Q8NI37 304 aa10.28□□□□□ -0.76
SMC4-214ENST00000472991 NAP1L4Q99733 375 aaKnown RBP10.28□□□□□ -0.76
SMC4-214ENST00000472991 SENP6Q9GZR1 1112 aaPredicted RBP10.28□□□□□ -0.76
SMC4-214ENST00000472991 C11orf49Q9H6J7 331 aa10.28□□□□□ -0.76
SMC4-214ENST00000472991 JPH1Q9HDC5 661 aaPredicted RBP10.28□□□□□ -0.76
SMC4-214ENST00000472991 EVA1BQ9NVM1 165 aa10.28□□□□□ -0.76
SMC4-214ENST00000472991 POLR3EQ9NVU0 708 aa10.28□□□□□ -0.76
SMC4-214ENST00000472991 GMPR2Q9P2T1 348 aaKnown RBP10.28□□□□□ -0.76
SMC4-214ENST00000472991 SLC9A2Q9UBY0 812 aa10.28□□□□□ -0.76
SMC4-214ENST00000472991 PHF24Q9UPV7 400 aa10.28□□□□□ -0.76
SMC4-214ENST00000472991 MTMR6Q9Y217 621 aa10.28□□□□□ -0.76
SMC4-214ENST00000472991 LTBP2Q14767 1821 aa10.28□□□□□ -0.76
SMC4-214ENST00000472991 TANC1Q9C0D5 1861 aa10.27□□□□□ -0.76
SMC4-214ENST00000472991 SPTLC1O15269 473 aa10.27□□□□□ -0.77
SMC4-214ENST00000472991 DHX15O43143 795 aaKnown RBP10.27□□□□□ -0.77
SMC4-214ENST00000472991 SIAH2O43255 324 aa10.27□□□□□ -0.77
SMC4-214ENST00000472991 ZNF286BP0CG31 522 aa10.27□□□□□ -0.77
SMC4-214ENST00000472991 MCM7P33993 719 aa10.27□□□□□ -0.77
SMC4-214ENST00000472991 ANP32AP39687 249 aaKnown RBP10.27□□□□□ -0.77
SMC4-214ENST00000472991 TRAPPC10P48553 1259 aa10.27□□□□□ -0.77
SMC4-214ENST00000472991 PURAQ00577 322 aaKnown RBP10.27□□□□□ -0.77
SMC4-214ENST00000472991 DGKDQ16760 1214 aa10.27□□□□□ -0.77
SMC4-214ENST00000472991 TTC38Q5R3I4 469 aa10.27□□□□□ -0.77
SMC4-214ENST00000472991 LRCH2Q5VUJ6 765 aa10.27□□□□□ -0.77
SMC4-214ENST00000472991 ETNPPLQ8TBG4 499 aa10.27□□□□□ -0.77
SMC4-214ENST00000472991 HPS1Q92902 700 aa10.27□□□□□ -0.77
SMC4-214ENST00000472991 SLC5A5Q92911 643 aa10.27□□□□□ -0.77
SMC4-214ENST00000472991 GPR20Q99678 358 aa10.27□□□□□ -0.77
SMC4-214ENST00000472991 TEKT3Q9BXF9 490 aa10.27□□□□□ -0.77
SMC4-214ENST00000472991 KCNMB3Q9NPA1 279 aa10.27□□□□□ -0.77
SMC4-214ENST00000472991 TBC1D22BQ9NU19 505 aa10.27□□□□□ -0.77
SMC4-214ENST00000472991 ELP1O95163 1332 aa10.27□□□□□ -0.77
SMC4-214ENST00000472991 NEMFO60524 1076 aa10.26□□□□□ -0.77
SMC4-214ENST00000472991 GAS7O60861 476 aa10.26□□□□□ -0.77
SMC4-214ENST00000472991 CCNE2O96020 404 aa10.26□□□□□ -0.77
SMC4-214ENST00000472991 LGALS2P05162 132 aa10.26□□□□□ -0.77
SMC4-214ENST00000472991 HOXD8P13378 290 aaPredicted RBP10.26□□□□□ -0.77
SMC4-214ENST00000472991 TCF7P36402 384 aaPredicted RBP10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms