RNA–Protein interactions for RNA: ENST00000472725.5

SF1-213, Transcript of splicing factor 1, humanhuman

TSL 3

Gene SF1, Length 632 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-213ENST00000472725 PPME1Q9Y570 386 aa22.41■■□□□ 1.18
SF1-213ENST00000472725 ZNF862O60290 1169 aa22.4■■□□□ 1.18
SF1-213ENST00000472725 B4GALT4O60513 344 aa22.4■■□□□ 1.18
SF1-213ENST00000472725 SLITRK3O94933 977 aa22.4■■□□□ 1.18
SF1-213ENST00000472725 CLTBP09497 229 aa22.4■■□□□ 1.18
SF1-213ENST00000472725 XRCC6P12956 609 aaKnown RBP eCLIP22.4■■□□□ 1.18
SF1-213ENST00000472725 RPA1P27694 616 aa22.4■■□□□ 1.18
SF1-213ENST00000472725 LONP1P36776 959 aaKnown RBP22.4■■□□□ 1.18
SF1-213ENST00000472725 ADAM17P78536 824 aa22.4■■□□□ 1.18
SF1-213ENST00000472725 PRKCEQ02156 737 aa22.4■■□□□ 1.18
SF1-213ENST00000472725 FAAP100Q0VG06 881 aa22.4■■□□□ 1.18
SF1-213ENST00000472725 PTGISQ16647 500 aa22.4■■□□□ 1.18
SF1-213ENST00000472725 GDF6Q6KF10 455 aaPredicted RBP22.4■■□□□ 1.18
SF1-213ENST00000472725 LINC00301Q8NCQ3 95 aa22.4■■□□□ 1.18
SF1-213ENST00000472725 LXNQ9BS40 222 aa22.4■■□□□ 1.18
SF1-213ENST00000472725 NIFKQ9BYG3 293 aaKnown RBP22.4■■□□□ 1.18
SF1-213ENST00000472725 PPP6R2O75170 966 aa22.39■■□□□ 1.17
SF1-213ENST00000472725 INSRRP14616 1297 aa22.39■■□□□ 1.17
SF1-213ENST00000472725 STK38Q15208 465 aa22.39■■□□□ 1.17
SF1-213ENST00000472725 GRIK4Q16099 956 aa22.39■■□□□ 1.17
SF1-213ENST00000472725 IL17AQ16552 155 aa22.39■■□□□ 1.17
SF1-213ENST00000472725 UGCGQ16739 394 aa22.39■■□□□ 1.17
SF1-213ENST00000472725 OTUD6AQ7L8S5 288 aa22.39■■□□□ 1.17
SF1-213ENST00000472725 BANK1Q8NDB2 785 aa22.39■■□□□ 1.17
SF1-213ENST00000472725 LMBR1Q8WVP7 490 aa22.39■■□□□ 1.17
SF1-213ENST00000472725 DYDC2Q96IM9 177 aa22.39■■□□□ 1.17
SF1-213ENST00000472725 NOD1Q9Y239 953 aa22.39■■□□□ 1.17
SF1-213ENST00000472725 SRPRBQ9Y5M8 271 aaKnown RBP22.39■■□□□ 1.17
SF1-213ENST00000472725 MBLAC1A4D2B0 266 aaPredicted RBP22.38■■□□□ 1.17
SF1-213ENST00000472725 VWA3AA6NCI4 1184 aa22.38■■□□□ 1.17
SF1-213ENST00000472725 KIAA0355O15063 1070 aa22.38■■□□□ 1.17
SF1-213ENST00000472725 PTK7Q13308 1070 aa22.38■■□□□ 1.17
SF1-213ENST00000472725 KRT79Q5XKE5 535 aa22.38■■□□□ 1.17
SF1-213ENST00000472725 EXOC8Q8IYI6 725 aa22.38■■□□□ 1.17
SF1-213ENST00000472725 CCDC155Q8N6L0 562 aa22.38■■□□□ 1.17
SF1-213ENST00000472725 KCNG4Q8TDN1 519 aa22.38■■□□□ 1.17
SF1-213ENST00000472725 IPO9Q96P70 1041 aaKnown RBP22.38■■□□□ 1.17
SF1-213ENST00000472725 FTOQ9C0B1 505 aaKnown RBP eCLIP22.38■■□□□ 1.17
SF1-213ENST00000472725 SETD4Q9NVD3 440 aa22.38■■□□□ 1.17
SF1-213ENST00000472725 RGL1Q9NZL6 768 aa22.38■■□□□ 1.17
SF1-213ENST00000472725 PRKAG2Q9UGJ0 569 aa22.38■■□□□ 1.17
SF1-213ENST00000472725 MAGEB2O15479 319 aa22.37■■□□□ 1.17
SF1-213ENST00000472725 STBD1O95210 358 aa22.37■■□□□ 1.17
SF1-213ENST00000472725 KRT85P78386 507 aa22.37■■□□□ 1.17
SF1-213ENST00000472725 CEBPZQ03701 1054 aaKnown RBP22.37■■□□□ 1.17
SF1-213ENST00000472725 TAF2Q6P1X5 1199 aa22.37■■□□□ 1.17
SF1-213ENST00000472725 SERINC5Q86VE9 423 aa22.37■■□□□ 1.17
SF1-213ENST00000472725 CATSPER3Q86XQ3 398 aa22.37■■□□□ 1.17
SF1-213ENST00000472725 TPH2Q8IWU9 490 aa22.37■■□□□ 1.17
SF1-213ENST00000472725 CAGE1Q8TC20 777 aa22.37■■□□□ 1.17
SF1-213ENST00000472725 TRPV6Q9H1D0 765 aa22.37■■□□□ 1.17
SF1-213ENST00000472725 PDLIM7Q9NR12 457 aa22.37■■□□□ 1.17
SF1-213ENST00000472725 ANKEF1Q9NU02 776 aa22.37■■□□□ 1.17
SF1-213ENST00000472725 TRMT13Q9NUP7 481 aaKnown RBP22.37■■□□□ 1.17
SF1-213ENST00000472725 TMEM39AQ9NV64 488 aa22.37■■□□□ 1.17
SF1-213ENST00000472725 TFIP11Q9UBB9 837 aaKnown RBP22.37■■□□□ 1.17
SF1-213ENST00000472725 TBX21Q9UL17 535 aa22.37■■□□□ 1.17
SF1-213ENST00000472725 TRIP12Q14669 1992 aaPredicted RBP22.37■■□□□ 1.17
SF1-213ENST00000472725 KDM3AQ9Y4C1 1321 aa22.36■■□□□ 1.17
SF1-213ENST00000472725 LOXHD1Q8IVV2 1947 aa22.36■■□□□ 1.17
SF1-213ENST00000472725 SPTLC2O15270 562 aa22.36■■□□□ 1.17
SF1-213ENST00000472725 CAND2O75155 1236 aa22.36■■□□□ 1.17
SF1-213ENST00000472725 SPATA31C1P0DKV0 1188 aa22.36■■□□□ 1.17
SF1-213ENST00000472725 CYP4A11Q02928 519 aa22.36■■□□□ 1.17
SF1-213ENST00000472725 DNM1Q05193 864 aaKnown RBP22.36■■□□□ 1.17
SF1-213ENST00000472725 RBL2Q08999 1139 aa22.36■■□□□ 1.17
SF1-213ENST00000472725 CTTNQ14247 550 aaKnown RBP22.36■■□□□ 1.17
SF1-213ENST00000472725 RPAINQ86UA6 219 aa22.36■■□□□ 1.17
SF1-213ENST00000472725 C7orf61Q8IZ16 206 aa22.36■■□□□ 1.17
SF1-213ENST00000472725 KRI1Q8N9T8 703 aaKnown RBP22.36■■□□□ 1.17
SF1-213ENST00000472725 NACC1Q96RE7 527 aa22.36■■□□□ 1.17
SF1-213ENST00000472725 TUBE1Q9UJT0 475 aa22.36■■□□□ 1.17
SF1-213ENST00000472725 FBXO2Q9UK22 296 aaPredicted RBP22.36■■□□□ 1.17
SF1-213ENST00000472725 PITPNM1O00562 1244 aa22.35■■□□□ 1.17
SF1-213ENST00000472725 YWHABP31946 246 aaKnown RBP22.35■■□□□ 1.17
SF1-213ENST00000472725 CCT6AP40227 531 aaKnown RBP22.35■■□□□ 1.17
SF1-213ENST00000472725 BFSP2Q13515 415 aa22.35■■□□□ 1.17
SF1-213ENST00000472725 TARBP2Q15633 366 aaKnown RBP22.35■■□□□ 1.17
SF1-213ENST00000472725 HYIQ5T013 277 aa22.35■■□□□ 1.17
SF1-213ENST00000472725 MARCH8Q5T0T0 291 aa22.35■■□□□ 1.17
SF1-213ENST00000472725 SNX29Q8TEQ0 813 aa22.35■■□□□ 1.17
SF1-213ENST00000472725 CTAGE1Q96RT6 745 aa22.35■■□□□ 1.17
SF1-213ENST00000472725 JPH2Q9BR39 696 aaPredicted RBP22.35■■□□□ 1.17
SF1-213ENST00000472725 SCAND2PQ9GZW5 306 aaPredicted RBP22.35■■□□□ 1.17
SF1-213ENST00000472725 NT5C3AQ9H0P0 336 aa22.35■■□□□ 1.17
SF1-213ENST00000472725 CHMP5Q9NZZ3 219 aa22.35■■□□□ 1.17
SF1-213ENST00000472725 SEPT9Q9UHD8 586 aaPredicted RBP22.35■■□□□ 1.17
SF1-213ENST00000472725 RCOR1Q9UKL0 485 aa22.35■■□□□ 1.17
SF1-213ENST00000472725 PCDHA2Q9Y5H9 948 aa22.35■■□□□ 1.17
SF1-213ENST00000472725 DDX11L8A8MPP1 907 aa22.34■■□□□ 1.17
SF1-213ENST00000472725 ZBTB42B2RXF5 422 aa22.34■■□□□ 1.17
SF1-213ENST00000472725 TREHO43280 583 aa22.34■■□□□ 1.17
SF1-213ENST00000472725 MED24O75448 989 aa22.34■■□□□ 1.17
SF1-213ENST00000472725 MARCKSP29966 332 aaPredicted RBP22.34■■□□□ 1.17
SF1-213ENST00000472725 HIC1Q14526 733 aa22.34■■□□□ 1.17
SF1-213ENST00000472725 MTHFD1LQ6UB35 978 aa22.34■■□□□ 1.17
SF1-213ENST00000472725 ANO5Q75V66 913 aa22.34■■□□□ 1.17
SF1-213ENST00000472725 ZNF579Q8NAF0 562 aaKnown RBP22.34■■□□□ 1.17
SF1-213ENST00000472725 CCSER1Q9C0I3 900 aa22.34■■□□□ 1.17
SF1-213ENST00000472725 WRAP73Q9P2S5 460 aaPredicted RBP22.34■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms