RNA–Protein interactions for RNA: ENST00000472318.1

SCAF4-205, Transcript of SR-related CTD associated factor 4, humanhuman

TSL 3

Gene SCAF4, Length 796 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-205ENST00000472318 HTATIP2Q9BUP3 242 aa8.68□□□□□ -1.02
SCAF4-205ENST00000472318 CNNM2Q9H8M5 875 aa8.68□□□□□ -1.02
SCAF4-205ENST00000472318 UBP1Q9NZI7 540 aa8.68□□□□□ -1.02
SCAF4-205ENST00000472318 EBF1Q9UH73 591 aa8.68□□□□□ -1.02
SCAF4-205ENST00000472318 FZD1Q9UP38 647 aa8.68□□□□□ -1.02
SCAF4-205ENST00000472318 MANSC4A6NHS7 340 aaPredicted RBP8.67□□□□□ -1.02
SCAF4-205ENST00000472318 NFIBO00712 420 aa8.67□□□□□ -1.02
SCAF4-205ENST00000472318 ECE2O60344 883 aa8.67□□□□□ -1.02
SCAF4-205ENST00000472318 BBOX1O75936 387 aa8.67□□□□□ -1.02
SCAF4-205ENST00000472318 VIL1P09327 827 aaKnown RBP8.67□□□□□ -1.02
SCAF4-205ENST00000472318 C1QTNF9P0C862 333 aa8.67□□□□□ -1.02
SCAF4-205ENST00000472318 CFPP27918 469 aa8.67□□□□□ -1.02
SCAF4-205ENST00000472318 POLR2BP30876 1174 aaKnown RBP8.67□□□□□ -1.02
SCAF4-205ENST00000472318 CHMP4BP1P59074 171 aa8.67□□□□□ -1.02
SCAF4-205ENST00000472318 CHRNEQ04844 493 aa8.67□□□□□ -1.02
SCAF4-205ENST00000472318 TCIRG1Q13488 830 aa8.67□□□□□ -1.02
SCAF4-205ENST00000472318 FBLN7Q53RD9 439 aa8.67□□□□□ -1.02
SCAF4-205ENST00000472318 LDLRAD1Q5T700 205 aa8.67□□□□□ -1.02
SCAF4-205ENST00000472318 IRF2BP1Q8IU81 584 aa8.67□□□□□ -1.02
SCAF4-205ENST00000472318 RPTORQ8N122 1335 aa8.67□□□□□ -1.02
SCAF4-205ENST00000472318 REXO1Q8N1G1 1221 aaKnown RBP8.67□□□□□ -1.02
SCAF4-205ENST00000472318 ANKS4BQ8N8V4 417 aa8.67□□□□□ -1.02
SCAF4-205ENST00000472318 LINC01599Q8WXQ3 324 aa8.67□□□□□ -1.02
SCAF4-205ENST00000472318 GUCD1Q96NT3 240 aa8.67□□□□□ -1.02
SCAF4-205ENST00000472318 G6PC3Q9BUM1 346 aa8.67□□□□□ -1.02
SCAF4-205ENST00000472318 ASCC2Q9H1I8 757 aaPredicted RBP8.67□□□□□ -1.02
SCAF4-205ENST00000472318 KCNK12Q9HB15 430 aa8.67□□□□□ -1.02
SCAF4-205ENST00000472318 CD320Q9NPF0 282 aa8.67□□□□□ -1.02
SCAF4-205ENST00000472318 CDH23Q9H251 3354 aa8.66□□□□□ -1.02
SCAF4-205ENST00000472318 IBTKQ9P2D0 1353 aaPredicted RBP8.66□□□□□ -1.02
SCAF4-205ENST00000472318 GLDCP23378 1020 aa8.66□□□□□ -1.02
SCAF4-205ENST00000472318 INHBEP58166 350 aa8.66□□□□□ -1.02
SCAF4-205ENST00000472318 IRX6P78412 446 aaPredicted RBP8.66□□□□□ -1.02
SCAF4-205ENST00000472318 RAD51AP2Q09MP3 1159 aa8.66□□□□□ -1.02
SCAF4-205ENST00000472318 NBPF12Q5TAG4 269 aaPredicted RBP8.66□□□□□ -1.02
SCAF4-205ENST00000472318 RNF111Q6ZNA4 994 aa8.66□□□□□ -1.02
SCAF4-205ENST00000472318 TTLL7Q6ZT98 887 aa8.66□□□□□ -1.02
SCAF4-205ENST00000472318 DAGLBQ8NCG7 672 aa8.66□□□□□ -1.02
SCAF4-205ENST00000472318 PTPN18Q99952 460 aa8.66□□□□□ -1.02
SCAF4-205ENST00000472318 GDF15Q99988 308 aa8.66□□□□□ -1.02
SCAF4-205ENST00000472318 SLC6A17Q9H1V8 727 aa8.66□□□□□ -1.02
SCAF4-205ENST00000472318 KLHL42Q9P2K6 505 aa8.66□□□□□ -1.02
SCAF4-205ENST00000472318 MEIS3P2A8K0S8 358 aa8.65□□□□□ -1.02
SCAF4-205ENST00000472318 CCNFP41002 786 aa8.65□□□□□ -1.02
SCAF4-205ENST00000472318 APOBRQ0VD83 1088 aa8.65□□□□□ -1.02
SCAF4-205ENST00000472318 GNL2Q13823 731 aaKnown RBP8.65□□□□□ -1.02
SCAF4-205ENST00000472318 NBPF9Q3BBW0 867 aa8.65□□□□□ -1.02
SCAF4-205ENST00000472318 LRIT3Q3SXY7 679 aa8.65□□□□□ -1.02
SCAF4-205ENST00000472318 SEZ6Q53EL9 994 aa8.65□□□□□ -1.02
SCAF4-205ENST00000472318 LCE4AQ5TA78 99 aa8.65□□□□□ -1.02
SCAF4-205ENST00000472318 NLRC3Q7RTR2 1065 aa8.65□□□□□ -1.02
SCAF4-205ENST00000472318 NT5DC4Q86YG4 428 aa8.65□□□□□ -1.02
SCAF4-205ENST00000472318 SPPL2CQ8IUH8 684 aa8.65□□□□□ -1.02
SCAF4-205ENST00000472318 LRRC56Q8IYG6 542 aaPredicted RBP8.65□□□□□ -1.02
SCAF4-205ENST00000472318 NGEFQ8N5V2 710 aa8.65□□□□□ -1.02
SCAF4-205ENST00000472318 ATG4CQ96DT6 458 aa8.65□□□□□ -1.02
SCAF4-205ENST00000472318 TINF2Q9BSI4 451 aa8.65□□□□□ -1.02
SCAF4-205ENST00000472318 BRINP2Q9C0B6 783 aa8.65□□□□□ -1.02
SCAF4-205ENST00000472318 CAPN10Q9HC96 672 aa8.65□□□□□ -1.02
SCAF4-205ENST00000472318 MYOZ2Q9NPC6 264 aa8.65□□□□□ -1.02
SCAF4-205ENST00000472318 POLLQ9UGP5 575 aa8.65□□□□□ -1.02
SCAF4-205ENST00000472318 YBX2Q9Y2T7 364 aaKnown RBP8.65□□□□□ -1.02
SCAF4-205ENST00000472318 NOP58Q9Y2X3 529 aaKnown RBP8.65□□□□□ -1.02
SCAF4-205ENST00000472318 ERVV-1B6SEH8 477 aa8.64□□□□□ -1.03
SCAF4-205ENST00000472318 SNRPA1P09661 255 aaKnown RBP8.64□□□□□ -1.03
SCAF4-205ENST00000472318 BMP8BP34820 402 aa8.64□□□□□ -1.03
SCAF4-205ENST00000472318 GJA8P48165 433 aa8.64□□□□□ -1.03
SCAF4-205ENST00000472318 CLCQ05315 142 aa8.64□□□□□ -1.03
SCAF4-205ENST00000472318 GRAPQ13588 217 aa8.64□□□□□ -1.03
SCAF4-205ENST00000472318 SNX17Q15036 470 aa8.64□□□□□ -1.03
SCAF4-205ENST00000472318 HSP90AB4PQ58FF6 505 aa8.64□□□□□ -1.03
SCAF4-205ENST00000472318 SLC10A5Q5PT55 438 aa8.64□□□□□ -1.03
SCAF4-205ENST00000472318 ARMC9Q7Z3E5 817 aa8.64□□□□□ -1.03
SCAF4-205ENST00000472318 TMC3Q7Z5M5 1100 aa8.64□□□□□ -1.03
SCAF4-205ENST00000472318 ZNF34Q8IZ26 560 aa8.64□□□□□ -1.03
SCAF4-205ENST00000472318 ZNF655Q8N720 491 aaPredicted RBP8.64□□□□□ -1.03
SCAF4-205ENST00000472318 GRAPLQ8TC17 118 aaPredicted RBP8.64□□□□□ -1.03
SCAF4-205ENST00000472318 WNK4Q96J92 1243 aa8.64□□□□□ -1.03
SCAF4-205ENST00000472318 CLMNQ96JQ2 1002 aa8.64□□□□□ -1.03
SCAF4-205ENST00000472318 NT5C1AQ9BXI3 368 aa8.64□□□□□ -1.03
SCAF4-205ENST00000472318 ARHGAP39Q9C0H5 1083 aa8.64□□□□□ -1.03
SCAF4-205ENST00000472318 ZSWIM4Q9H7M6 989 aa8.64□□□□□ -1.03
SCAF4-205ENST00000472318 CCSER2Q9H7U1 834 aa8.64□□□□□ -1.03
SCAF4-205ENST00000472318 LAMB4A4D0S4 1761 aa8.63□□□□□ -1.03
SCAF4-205ENST00000472318 MAP3K15Q6ZN16 1313 aa8.63□□□□□ -1.03
SCAF4-205ENST00000472318 HMGB1P1B2RPK0 211 aaPredicted RBP8.63□□□□□ -1.03
SCAF4-205ENST00000472318 MAP4K4O95819 1239 aaPredicted RBP8.63□□□□□ -1.03
SCAF4-205ENST00000472318 TMEM253P0C7T8 217 aa8.63□□□□□ -1.03
SCAF4-205ENST00000472318 SNW1Q13573 536 aaKnown RBP8.63□□□□□ -1.03
SCAF4-205ENST00000472318 RNF187Q5TA31 235 aaPredicted RBP8.63□□□□□ -1.03
SCAF4-205ENST00000472318 GK5Q6ZS86 529 aa8.63□□□□□ -1.03
SCAF4-205ENST00000472318 SLITRK4Q8IW52 837 aa8.63□□□□□ -1.03
SCAF4-205ENST00000472318 TMEM87AQ8NBN3 555 aa8.63□□□□□ -1.03
SCAF4-205ENST00000472318 ZSCAN18Q8TBC5 510 aaPredicted RBP8.63□□□□□ -1.03
SCAF4-205ENST00000472318 TCTN2Q96GX1 697 aa8.63□□□□□ -1.03
SCAF4-205ENST00000472318 INTS4Q96HW7 963 aaKnown RBP8.63□□□□□ -1.03
SCAF4-205ENST00000472318 GMLQ99445 158 aa8.63□□□□□ -1.03
SCAF4-205ENST00000472318 TGIF2Q9GZN2 237 aa8.63□□□□□ -1.03
SCAF4-205ENST00000472318 KDM3BQ7LBC6 1761 aa8.63□□□□□ -1.03
SCAF4-205ENST00000472318 NOTOA8MTQ0 251 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms