RNA–Protein interactions for RNA: ENST00000472223.5

CCM2-205, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 981 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-205ENST00000472223 ANKLE1Q8NAG6 615 aa18.84■□□□□ 0.61
CCM2-205ENST00000472223 BBXQ8WY36 941 aaPredicted RBP18.84■□□□□ 0.61
CCM2-205ENST00000472223 PANK2Q9BZ23 570 aa18.84■□□□□ 0.61
CCM2-205ENST00000472223 USP25Q9UHP3 1055 aa18.84■□□□□ 0.61
CCM2-205ENST00000472223 FRMPD3Q5JV73 1810 aa18.84■□□□□ 0.61
CCM2-205ENST00000472223 IGSF9BQ9UPX0 1349 aa18.83■□□□□ 0.61
CCM2-205ENST00000472223 POTEB3A0JP26 581 aa18.83■□□□□ 0.6
CCM2-205ENST00000472223 MYADML2A6NDP7 307 aa18.83■□□□□ 0.6
CCM2-205ENST00000472223 HBP1O60381 514 aa18.83■□□□□ 0.6
CCM2-205ENST00000472223 LYPLA2O95372 231 aa18.83■□□□□ 0.6
CCM2-205ENST00000472223 OATP04181 439 aa18.83■□□□□ 0.6
CCM2-205ENST00000472223 SPATA31C1P0DKV0 1188 aa18.83■□□□□ 0.6
CCM2-205ENST00000472223 PFKFB1P16118 471 aa18.83■□□□□ 0.6
CCM2-205ENST00000472223 YWHABP31946 246 aaKnown RBP18.83■□□□□ 0.6
CCM2-205ENST00000472223 MCM4P33991 863 aa18.83■□□□□ 0.6
CCM2-205ENST00000472223 PSEN2P49810 448 aa18.83■□□□□ 0.6
CCM2-205ENST00000472223 PRKCEQ02156 737 aa18.83■□□□□ 0.6
CCM2-205ENST00000472223 MFSD10Q14728 455 aa18.83■□□□□ 0.6
CCM2-205ENST00000472223 KIAA0753Q2KHM9 967 aa18.83■□□□□ 0.6
CCM2-205ENST00000472223 HYIQ5T013 277 aa18.83■□□□□ 0.6
CCM2-205ENST00000472223 POTEBQ6S5H4 581 aa18.83■□□□□ 0.6
CCM2-205ENST00000472223 CXCL17Q6UXB2 119 aa18.83■□□□□ 0.6
CCM2-205ENST00000472223 EXOC8Q8IYI6 725 aa18.83■□□□□ 0.6
CCM2-205ENST00000472223 PDILTQ8N807 584 aa18.83■□□□□ 0.6
CCM2-205ENST00000472223 C7orf31Q8N865 590 aa18.83■□□□□ 0.6
CCM2-205ENST00000472223 PLIN2Q99541 437 aa18.83■□□□□ 0.6
CCM2-205ENST00000472223 C16orf70Q9BSU1 422 aa18.83■□□□□ 0.6
CCM2-205ENST00000472223 MMTAG2Q9BU76 263 aaKnown RBP18.83■□□□□ 0.6
CCM2-205ENST00000472223 LRRC27Q9C0I9 530 aa18.83■□□□□ 0.6
CCM2-205ENST00000472223 CRISPLD2Q9H0B8 497 aa18.83■□□□□ 0.6
CCM2-205ENST00000472223 CUEDC2Q9H467 287 aa18.83■□□□□ 0.6
CCM2-205ENST00000472223 STK17AQ9UEE5 414 aa18.83■□□□□ 0.6
CCM2-205ENST00000472223 SEPT9Q9UHD8 586 aaPredicted RBP18.83■□□□□ 0.6
CCM2-205ENST00000472223 TELO2Q9Y4R8 837 aa18.83■□□□□ 0.6
CCM2-205ENST00000472223 WDR81Q562E7 1941 aa18.82■□□□□ 0.6
CCM2-205ENST00000472223 POTEFA5A3E0 1075 aa18.82■□□□□ 0.6
CCM2-205ENST00000472223 CTAGE5O15320 804 aa18.82■□□□□ 0.6
CCM2-205ENST00000472223 POLR2DO15514 142 aaKnown RBP18.82■□□□□ 0.6
CCM2-205ENST00000472223 F2P00734 622 aa18.82■□□□□ 0.6
CCM2-205ENST00000472223 GNAT1P11488 350 aa18.82■□□□□ 0.6
CCM2-205ENST00000472223 POTEGQ6S5H5 508 aa18.82■□□□□ 0.6
CCM2-205ENST00000472223 USP49Q70CQ1 688 aa18.82■□□□□ 0.6
CCM2-205ENST00000472223 TRIM50Q86XT4 487 aa18.82■□□□□ 0.6
CCM2-205ENST00000472223 ATP8B4Q8TF62 1192 aa18.82■□□□□ 0.6
CCM2-205ENST00000472223 DHX58Q96C10 678 aa18.82■□□□□ 0.6
CCM2-205ENST00000472223 PCYT2Q99447 389 aa18.82■□□□□ 0.6
CCM2-205ENST00000472223 SEZ6LQ9BYH1 1024 aa18.82■□□□□ 0.6
CCM2-205ENST00000472223 ANKEF1Q9NU02 776 aa18.82■□□□□ 0.6
CCM2-205ENST00000472223 HOOK1Q9UJC3 728 aaKnown RBP18.82■□□□□ 0.6
CCM2-205ENST00000472223 KAT6AQ92794 2004 aa18.81■□□□□ 0.6
CCM2-205ENST00000472223 LOXHD1Q8IVV2 1947 aa18.81■□□□□ 0.6
CCM2-205ENST00000472223 ARHGEF35A5YM69 484 aa18.81■□□□□ 0.6
CCM2-205ENST00000472223 SSBP05455 408 aaKnown RBP eCLIP18.81■□□□□ 0.6
CCM2-205ENST00000472223 PLCG1P19174 1290 aa18.81■□□□□ 0.6
CCM2-205ENST00000472223 IRX5P78411 483 aaPredicted RBP18.81■□□□□ 0.6
CCM2-205ENST00000472223 AMPD3Q01432 767 aa18.81■□□□□ 0.6
CCM2-205ENST00000472223 FAM160A1Q05DH4 1040 aa18.81■□□□□ 0.6
CCM2-205ENST00000472223 GRB10Q13322 594 aa18.81■□□□□ 0.6
CCM2-205ENST00000472223 UGCGQ16739 394 aa18.81■□□□□ 0.6
CCM2-205ENST00000472223 XKR9Q5GH70 373 aa18.81■□□□□ 0.6
CCM2-205ENST00000472223 ZNF484Q5JVG2 852 aa18.81■□□□□ 0.6
CCM2-205ENST00000472223 CEP170P1Q96L14 293 aa18.81■□□□□ 0.6
CCM2-205ENST00000472223 STARD7Q9NQZ5 370 aa18.81■□□□□ 0.6
CCM2-205ENST00000472223 BMP2KQ9NSY1 1161 aaPredicted RBP18.81■□□□□ 0.6
CCM2-205ENST00000472223 PHF24Q9UPV7 400 aa18.81■□□□□ 0.6
CCM2-205ENST00000472223 PPME1Q9Y570 386 aa18.81■□□□□ 0.6
CCM2-205ENST00000472223 RRN3P2A6NIE6 340 aa18.8■□□□□ 0.6
CCM2-205ENST00000472223 KINO60870 393 aaKnown RBP18.8■□□□□ 0.6
CCM2-205ENST00000472223 GADD45BO75293 160 aaPredicted RBP18.8■□□□□ 0.6
CCM2-205ENST00000472223 EYA4O95677 639 aa18.8■□□□□ 0.6
CCM2-205ENST00000472223 NDUFA8P51970 172 aa18.8■□□□□ 0.6
CCM2-205ENST00000472223 PLCB4Q15147 1175 aa18.8■□□□□ 0.6
CCM2-205ENST00000472223 FAM47CQ5HY64 1035 aa18.8■□□□□ 0.6
CCM2-205ENST00000472223 CCSAPQ6IQ19 270 aaPredicted RBP18.8■□□□□ 0.6
CCM2-205ENST00000472223 KANK3Q6NY19 840 aa18.8■□□□□ 0.6
CCM2-205ENST00000472223 SV2BQ7L1I2 683 aa18.8■□□□□ 0.6
CCM2-205ENST00000472223 PIGOQ8TEQ8 1089 aa18.8■□□□□ 0.6
CCM2-205ENST00000472223 PNMA5Q96PV4 448 aa18.8■□□□□ 0.6
CCM2-205ENST00000472223 JPH2Q9BR39 696 aaPredicted RBP18.8■□□□□ 0.6
CCM2-205ENST00000472223 MAGEF1Q9HAY2 307 aa18.8■□□□□ 0.6
CCM2-205ENST00000472223 LMBRD1Q9NUN5 540 aa18.8■□□□□ 0.6
CCM2-205ENST00000472223 DBR1Q9UK59 544 aaKnown RBP18.8■□□□□ 0.6
CCM2-205ENST00000472223 NRCAMQ92823 1304 aa18.79■□□□□ 0.6
CCM2-205ENST00000472223 HTTP42858 3142 aa18.79■□□□□ 0.6
CCM2-205ENST00000472223 FAM237AA0A1B0GTK4 181 aa18.79■□□□□ 0.6
CCM2-205ENST00000472223 ZNF862O60290 1169 aa18.79■□□□□ 0.6
CCM2-205ENST00000472223 MBD3O95983 291 aa18.79■□□□□ 0.6
CCM2-205ENST00000472223 PPFIA1Q13136 1202 aa18.79■□□□□ 0.6
CCM2-205ENST00000472223 MTERF2Q49AM1 385 aa18.79■□□□□ 0.6
CCM2-205ENST00000472223 TMEM119Q4V9L6 283 aa18.79■□□□□ 0.6
CCM2-205ENST00000472223 CNNM3Q8NE01 707 aa18.79■□□□□ 0.6
CCM2-205ENST00000472223 LARP4BQ92615 738 aaKnown RBP18.79■□□□□ 0.6
CCM2-205ENST00000472223 RAD54LQ92698 747 aa18.79■□□□□ 0.6
CCM2-205ENST00000472223 NIFKQ9BYG3 293 aaKnown RBP18.79■□□□□ 0.6
CCM2-205ENST00000472223 RNPEPQ9H4A4 650 aa18.79■□□□□ 0.6
CCM2-205ENST00000472223 HPSEQ9Y251 543 aa18.79■□□□□ 0.6
CCM2-205ENST00000472223 COL1A2P08123 1366 aa18.79■□□□□ 0.6
CCM2-205ENST00000472223 A0A0U1RQG5 324 aaPredicted RBP18.78■□□□□ 0.6
CCM2-205ENST00000472223 A0A1W2PQ45 241 aaPredicted RBP18.78■□□□□ 0.6
CCM2-205ENST00000472223 A0A1W2PQY0 241 aa18.78■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms