RNA–Protein interactions for RNA: ENST00000471744.1

SNX13-205, Transcript of sorting nexin 13, humanhuman

TSL 4

Gene SNX13, Length 454 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-205ENST00000471744 TANC1Q9C0D5 1861 aa16.97■□□□□ 0.31
SNX13-205ENST00000471744 MBLAC1A4D2B0 266 aaPredicted RBP16.97■□□□□ 0.31
SNX13-205ENST00000471744 EML1O00423 815 aa16.97■□□□□ 0.31
SNX13-205ENST00000471744 CAND2O75155 1236 aa16.97■□□□□ 0.31
SNX13-205ENST00000471744 OATP04181 439 aa16.97■□□□□ 0.31
SNX13-205ENST00000471744 CYP2C9P11712 490 aa16.97■□□□□ 0.31
SNX13-205ENST00000471744 QARSP47897 775 aaKnown RBP16.97■□□□□ 0.31
SNX13-205ENST00000471744 PRKCEQ02156 737 aa16.97■□□□□ 0.31
SNX13-205ENST00000471744 RESTQ13127 1097 aa16.97■□□□□ 0.31
SNX13-205ENST00000471744 NBR1Q14596 966 aa16.97■□□□□ 0.31
SNX13-205ENST00000471744 XKR3Q5GH77 459 aa16.97■□□□□ 0.31
SNX13-205ENST00000471744 ARL6IP4Q66PJ3 421 aaKnown RBP16.97■□□□□ 0.31
SNX13-205ENST00000471744 TAF2Q6P1X5 1199 aa16.97■□□□□ 0.31
SNX13-205ENST00000471744 TMEM199Q8N511 208 aa16.97■□□□□ 0.31
SNX13-205ENST00000471744 C4orf32Q8N8J7 132 aa16.97■□□□□ 0.31
SNX13-205ENST00000471744 RETREG2Q8NC44 543 aa16.97■□□□□ 0.31
SNX13-205ENST00000471744 ERMNQ8TAM6 284 aa16.97■□□□□ 0.31
SNX13-205ENST00000471744 CTAGE1Q96RT6 745 aa16.97■□□□□ 0.31
SNX13-205ENST00000471744 TUBE1Q9UJT0 475 aa16.97■□□□□ 0.31
SNX13-205ENST00000471744 DNAH12Q6ZR08 3092 aa16.97■□□□□ 0.31
SNX13-205ENST00000471744 TREHO43280 583 aa16.96■□□□□ 0.31
SNX13-205ENST00000471744 PARNO95453 639 aaKnown RBP16.96■□□□□ 0.31
SNX13-205ENST00000471744 ATP4AP20648 1035 aa16.96■□□□□ 0.31
SNX13-205ENST00000471744 FXR2P51116 673 aaKnown RBP eCLIP16.96■□□□□ 0.31
SNX13-205ENST00000471744 ATP2C1P98194 919 aaPredicted RBP16.96■□□□□ 0.31
SNX13-205ENST00000471744 PDIA5Q14554 519 aa16.96■□□□□ 0.31
SNX13-205ENST00000471744 MFSD5Q6N075 450 aa16.96■□□□□ 0.31
SNX13-205ENST00000471744 RSPH3Q86UC2 560 aa16.96■□□□□ 0.31
SNX13-205ENST00000471744 SPRYD3Q8NCJ5 442 aa16.96■□□□□ 0.31
SNX13-205ENST00000471744 PPP1R12CQ9BZL4 782 aa16.96■□□□□ 0.31
SNX13-205ENST00000471744 ZNF862O60290 1169 aa16.95■□□□□ 0.3
SNX13-205ENST00000471744 TECP42680 631 aa16.95■□□□□ 0.3
SNX13-205ENST00000471744 MAGEA10P43363 369 aaPredicted RBP16.95■□□□□ 0.3
SNX13-205ENST00000471744 ZNF200P98182 395 aaPredicted RBP16.95■□□□□ 0.3
SNX13-205ENST00000471744 PPIGQ13427 754 aaKnown RBP eCLIP16.95■□□□□ 0.3
SNX13-205ENST00000471744 HIC1Q14526 733 aa16.95■□□□□ 0.3
SNX13-205ENST00000471744 UGCGQ16739 394 aa16.95■□□□□ 0.3
SNX13-205ENST00000471744 HAUS3Q68CZ6 603 aa16.95■□□□□ 0.3
SNX13-205ENST00000471744 DTHD1Q6ZMT9 781 aa16.95■□□□□ 0.3
SNX13-205ENST00000471744 C4orf19Q8IY42 314 aa16.95■□□□□ 0.3
SNX13-205ENST00000471744 BANK1Q8NDB2 785 aa16.95■□□□□ 0.3
SNX13-205ENST00000471744 EIF2AK1Q9BQI3 630 aaKnown RBP16.95■□□□□ 0.3
SNX13-205ENST00000471744 LXNQ9BS40 222 aa16.95■□□□□ 0.3
SNX13-205ENST00000471744 ZSWIM4Q9H7M6 989 aa16.95■□□□□ 0.3
SNX13-205ENST00000471744 PPME1Q9Y570 386 aa16.95■□□□□ 0.3
SNX13-205ENST00000471744 LOXHD1Q8IVV2 1947 aa16.95■□□□□ 0.3
SNX13-205ENST00000471744 POTEMA6NI47 508 aa16.94■□□□□ 0.3
SNX13-205ENST00000471744 MAGEB2O15479 319 aa16.94■□□□□ 0.3
SNX13-205ENST00000471744 ZSCAN22P10073 491 aaPredicted RBP16.94■□□□□ 0.3
SNX13-205ENST00000471744 MUTP22033 750 aa16.94■□□□□ 0.3
SNX13-205ENST00000471744 CYP2C18P33260 490 aa16.94■□□□□ 0.3
SNX13-205ENST00000471744 BMP8BP34820 402 aa16.94■□□□□ 0.3
SNX13-205ENST00000471744 RFC2P35250 354 aa16.94■□□□□ 0.3
SNX13-205ENST00000471744 IGBP1P78318 339 aa16.94■□□□□ 0.3
SNX13-205ENST00000471744 FPGSQ05932 587 aa16.94■□□□□ 0.3
SNX13-205ENST00000471744 RPAINQ86UA6 219 aa16.94■□□□□ 0.3
SNX13-205ENST00000471744 DHX38Q92620 1227 aaKnown RBP16.94■□□□□ 0.3
SNX13-205ENST00000471744 BADQ92934 168 aa16.94■□□□□ 0.3
SNX13-205ENST00000471744 GDF15Q99988 308 aa16.94■□□□□ 0.3
SNX13-205ENST00000471744 HSD17B14Q9BPX1 270 aa16.94■□□□□ 0.3
SNX13-205ENST00000471744 NIFKQ9BYG3 293 aaKnown RBP16.94■□□□□ 0.3
SNX13-205ENST00000471744 TUFT1Q9NNX1 390 aa16.94■□□□□ 0.3
SNX13-205ENST00000471744 PCDHA2Q9Y5H9 948 aa16.94■□□□□ 0.3
SNX13-205ENST00000471744 LYPLA2O95372 231 aa16.93■□□□□ 0.3
SNX13-205ENST00000471744 CKBP12277 381 aa16.93■□□□□ 0.3
SNX13-205ENST00000471744 SELPP16109 830 aa16.93■□□□□ 0.3
SNX13-205ENST00000471744 ITGB8P26012 769 aa16.93■□□□□ 0.3
SNX13-205ENST00000471744 MDM2Q00987 491 aaPredicted RBP16.93■□□□□ 0.3
SNX13-205ENST00000471744 TRIM71Q2Q1W2 868 aaKnown RBP16.93■□□□□ 0.3
SNX13-205ENST00000471744 MARCH8Q5T0T0 291 aa16.93■□□□□ 0.3
SNX13-205ENST00000471744 MTHFD1LQ6UB35 978 aa16.93■□□□□ 0.3
SNX13-205ENST00000471744 OTUD6AQ7L8S5 288 aa16.93■□□□□ 0.3
SNX13-205ENST00000471744 EXOC8Q8IYI6 725 aa16.93■□□□□ 0.3
SNX13-205ENST00000471744 IGSF22Q8N9C0 903 aa16.93■□□□□ 0.3
SNX13-205ENST00000471744 DYDC2Q96IM9 177 aa16.93■□□□□ 0.3
SNX13-205ENST00000471744 ZNF396Q96N95 335 aaPredicted RBP16.93■□□□□ 0.3
SNX13-205ENST00000471744 POLR3CQ9BUI4 534 aaPredicted RBP16.93■□□□□ 0.3
SNX13-205ENST00000471744 LRWD1Q9UFC0 647 aa16.93■□□□□ 0.3
SNX13-205ENST00000471744 SEPT9Q9UHD8 586 aaPredicted RBP16.93■□□□□ 0.3
SNX13-205ENST00000471744 SCN5AQ14524 2016 aa16.92■□□□□ 0.3
SNX13-205ENST00000471744 SMIM35A0A1B0GVV1 85 aa16.92■□□□□ 0.3
SNX13-205ENST00000471744 DDX11L8A8MPP1 907 aa16.92■□□□□ 0.3
SNX13-205ENST00000471744 ZBTB42B2RXF5 422 aa16.92■□□□□ 0.3
SNX13-205ENST00000471744 SLITRK3O94933 977 aa16.92■□□□□ 0.3
SNX13-205ENST00000471744 F13A1P00488 732 aa16.92■□□□□ 0.3
SNX13-205ENST00000471744 PFKMP08237 780 aa16.92■□□□□ 0.3
SNX13-205ENST00000471744 KLRC1P26715 233 aa16.92■□□□□ 0.3
SNX13-205ENST00000471744 RPA1P27694 616 aa16.92■□□□□ 0.3
SNX13-205ENST00000471744 ANP32AP39687 249 aaKnown RBP16.92■□□□□ 0.3
SNX13-205ENST00000471744 THPOP40225 353 aa16.92■□□□□ 0.3
SNX13-205ENST00000471744 CYP4A11Q02928 519 aa16.92■□□□□ 0.3
SNX13-205ENST00000471744 SF3A1Q15459 793 aaKnown RBP16.92■□□□□ 0.3
SNX13-205ENST00000471744 LRRC8DQ7L1W4 858 aa16.92■□□□□ 0.3
SNX13-205ENST00000471744 TRMT1LQ7Z2T5 733 aaKnown RBP16.92■□□□□ 0.3
SNX13-205ENST00000471744 TPH2Q8IWU9 490 aa16.92■□□□□ 0.3
SNX13-205ENST00000471744 RPUSD2Q8IZ73 545 aaKnown RBP16.92■□□□□ 0.3
SNX13-205ENST00000471744 ZNF710Q8N1W2 664 aa16.92■□□□□ 0.3
SNX13-205ENST00000471744 NME8Q8N427 588 aa16.92■□□□□ 0.3
SNX13-205ENST00000471744 JPH2Q9BR39 696 aaPredicted RBP16.92■□□□□ 0.3
SNX13-205ENST00000471744 WNT8AQ9H1J5 351 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms