RNA–Protein interactions for RNA: ENST00000471701.1

PRPF40A-207, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 2

Gene PRPF40A, Length 293 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-207ENST00000471701 ZNF747Q9BV97 191 aa5.37□□□□□ -1.55
PRPF40A-207ENST00000471701 HIRIP3Q9BW71 556 aaPredicted RBP5.37□□□□□ -1.55
PRPF40A-207ENST00000471701 C12orf65Q9H3J6 166 aaKnown RBP5.37□□□□□ -1.55
PRPF40A-207ENST00000471701 FBXO10Q9UK96 956 aa5.37□□□□□ -1.55
PRPF40A-207ENST00000471701 PTPN22Q9Y2R2 807 aa5.37□□□□□ -1.55
PRPF40A-207ENST00000471701 CCDC66A2RUB6 948 aa5.36□□□□□ -1.55
PRPF40A-207ENST00000471701 PRAMEF25A6NGN4 478 aa5.36□□□□□ -1.55
PRPF40A-207ENST00000471701 ARVCFO00192 962 aa5.36□□□□□ -1.55
PRPF40A-207ENST00000471701 CYR61O00622 381 aa5.36□□□□□ -1.55
PRPF40A-207ENST00000471701 MAN2B1O00754 1011 aa5.36□□□□□ -1.55
PRPF40A-207ENST00000471701 CLASP2O75122 1294 aaKnown RBP5.36□□□□□ -1.55
PRPF40A-207ENST00000471701 CRTAMO95727 393 aa5.36□□□□□ -1.55
PRPF40A-207ENST00000471701 RRADP55042 308 aa5.36□□□□□ -1.55
PRPF40A-207ENST00000471701 HERVK_113P62684 666 aa5.36□□□□□ -1.55
PRPF40A-207ENST00000471701 FIGNQ5HY92 759 aa5.36□□□□□ -1.55
PRPF40A-207ENST00000471701 ZC3H12BQ5HYM0 836 aaKnown RBP5.36□□□□□ -1.55
PRPF40A-207ENST00000471701 SPDYAQ5MJ70 313 aa5.36□□□□□ -1.55
PRPF40A-207ENST00000471701 FOXB2Q5VYV0 432 aa5.36□□□□□ -1.55
PRPF40A-207ENST00000471701 CRIP3Q6Q6R5 217 aa5.36□□□□□ -1.55
PRPF40A-207ENST00000471701 ADOQ96SZ5 270 aa5.36□□□□□ -1.55
PRPF40A-207ENST00000471701 ZNF341Q9BYN7 854 aa5.36□□□□□ -1.55
PRPF40A-207ENST00000471701 INCENPQ9NQS7 918 aa5.36□□□□□ -1.55
PRPF40A-207ENST00000471701 IGSF5Q9NSI5 407 aa5.36□□□□□ -1.55
PRPF40A-207ENST00000471701 CBLCQ9ULV8 474 aa5.36□□□□□ -1.55
PRPF40A-207ENST00000471701 NR2E1Q9Y466 385 aa5.36□□□□□ -1.55
PRPF40A-207ENST00000471701 DIAPH1O60610 1272 aaKnown RBP5.35□□□□□ -1.55
PRPF40A-207ENST00000471701 EFCAB14O75071 495 aa5.35□□□□□ -1.55
PRPF40A-207ENST00000471701 C6orf222P0C671 652 aaPredicted RBP5.35□□□□□ -1.55
PRPF40A-207ENST00000471701 CR2P20023 1033 aa5.35□□□□□ -1.55
PRPF40A-207ENST00000471701 COMTP21964 271 aa5.35□□□□□ -1.55
PRPF40A-207ENST00000471701 LACTBP83111 547 aaPredicted RBP5.35□□□□□ -1.55
PRPF40A-207ENST00000471701 NOLC1Q14978 699 aaKnown RBP eCLIP5.35□□□□□ -1.55
PRPF40A-207ENST00000471701 R3HDM1Q15032 1099 aaKnown RBP5.35□□□□□ -1.55
PRPF40A-207ENST00000471701 MAGEB10Q96LZ2 347 aaPredicted RBP5.35□□□□□ -1.55
PRPF40A-207ENST00000471701 MRIQ9BWK5 157 aa5.35□□□□□ -1.55
PRPF40A-207ENST00000471701 ZDHHC5Q9C0B5 715 aa5.35□□□□□ -1.55
PRPF40A-207ENST00000471701 HS3ST3A1Q9Y663 406 aa5.35□□□□□ -1.55
PRPF40A-207ENST00000471701 KCNK3O14649 394 aa5.34□□□□□ -1.55
PRPF40A-207ENST00000471701 CDC14BO60729 498 aa5.34□□□□□ -1.55
PRPF40A-207ENST00000471701 C4BPAP04003 597 aaKnown RBP5.34□□□□□ -1.55
PRPF40A-207ENST00000471701 HMGCRP04035 888 aa5.34□□□□□ -1.55
PRPF40A-207ENST00000471701 ACVRL1P37023 503 aa5.34□□□□□ -1.55
PRPF40A-207ENST00000471701 ADCY8P40145 1251 aa5.34□□□□□ -1.55
PRPF40A-207ENST00000471701 ETV4P43268 484 aa5.34□□□□□ -1.55
PRPF40A-207ENST00000471701 KCNQ1P51787 676 aa5.34□□□□□ -1.55
PRPF40A-207ENST00000471701 RNF151Q2KHN1 245 aa5.34□□□□□ -1.55
PRPF40A-207ENST00000471701 OTOP2Q7RTS6 562 aa5.34□□□□□ -1.55
PRPF40A-207ENST00000471701 ZFPM1Q8IX07 1006 aa5.34□□□□□ -1.55
PRPF40A-207ENST00000471701 WNK4Q96J92 1243 aa5.34□□□□□ -1.55
PRPF40A-207ENST00000471701 EXOC2Q96KP1 924 aa5.34□□□□□ -1.55
PRPF40A-207ENST00000471701 BTBD2Q9BX70 525 aa5.34□□□□□ -1.55
PRPF40A-207ENST00000471701 SCAND2PQ9GZW5 306 aaPredicted RBP5.34□□□□□ -1.55
PRPF40A-207ENST00000471701 NDOR1Q9UHB4 597 aa5.34□□□□□ -1.55
PRPF40A-207ENST00000471701 PUF60Q9UHX1 559 aaKnown RBP5.34□□□□□ -1.55
PRPF40A-207ENST00000471701 MRPS23Q9Y3D9 190 aaKnown RBP5.34□□□□□ -1.55
PRPF40A-207ENST00000471701 ZNF561-AS1K7EIQ3 104 aa5.33□□□□□ -1.56
PRPF40A-207ENST00000471701 SCDO00767 359 aa5.33□□□□□ -1.56
PRPF40A-207ENST00000471701 AOAHP28039 575 aa5.33□□□□□ -1.56
PRPF40A-207ENST00000471701 ECE1P42892 770 aa5.33□□□□□ -1.56
PRPF40A-207ENST00000471701 MEOX1P50221 254 aa5.33□□□□□ -1.56
PRPF40A-207ENST00000471701 IL13RA1P78552 427 aa5.33□□□□□ -1.56
PRPF40A-207ENST00000471701 NRN1LQ496H8 165 aa5.33□□□□□ -1.56
PRPF40A-207ENST00000471701 AGBL4Q5VU57 503 aa5.33□□□□□ -1.56
PRPF40A-207ENST00000471701 USP30Q70CQ3 517 aa5.33□□□□□ -1.56
PRPF40A-207ENST00000471701 LRP10Q7Z4F1 713 aa5.33□□□□□ -1.56
PRPF40A-207ENST00000471701 FUKQ8N0W3 1084 aa5.33□□□□□ -1.56
PRPF40A-207ENST00000471701 Q8N1X5 172 aa5.33□□□□□ -1.56
PRPF40A-207ENST00000471701 EDAQ92838 391 aa5.33□□□□□ -1.56
PRPF40A-207ENST00000471701 FAM89AQ96GI7 184 aa5.33□□□□□ -1.56
PRPF40A-207ENST00000471701 UCKL1Q9NWZ5 548 aa5.33□□□□□ -1.56
PRPF40A-207ENST00000471701 CDC42EP3Q9UKI2 254 aa5.33□□□□□ -1.56
PRPF40A-207ENST00000471701 OAZ3Q9UMX2 235 aa5.33□□□□□ -1.56
PRPF40A-207ENST00000471701 CCDC163A0A0D9SF12 145 aa5.32□□□□□ -1.56
PRPF40A-207ENST00000471701 ARHGAP6O43182 974 aa5.32□□□□□ -1.56
PRPF40A-207ENST00000471701 RAD17O75943 681 aa5.32□□□□□ -1.56
PRPF40A-207ENST00000471701 RPS19P39019 145 aaKnown RBP5.32□□□□□ -1.56
PRPF40A-207ENST00000471701 FOXE3Q13461 319 aa5.32□□□□□ -1.56
PRPF40A-207ENST00000471701 POLNQ7Z5Q5 900 aa5.32□□□□□ -1.56
PRPF40A-207ENST00000471701 RTKN2Q8IZC4 609 aa5.32□□□□□ -1.56
PRPF40A-207ENST00000471701 HIPK4Q8NE63 616 aa5.32□□□□□ -1.56
PRPF40A-207ENST00000471701 OR14A2Q96R54 314 aa5.32□□□□□ -1.56
PRPF40A-207ENST00000471701 SMURF1Q9HCE7 757 aa5.32□□□□□ -1.56
PRPF40A-207ENST00000471701 A0A0G2JNJ9 132 aa5.31□□□□□ -1.56
PRPF40A-207ENST00000471701 SUV39H1O43463 412 aa5.31□□□□□ -1.56
PRPF40A-207ENST00000471701 ACO1P21399 889 aaKnown RBP5.31□□□□□ -1.56
PRPF40A-207ENST00000471701 CD83Q01151 205 aa5.31□□□□□ -1.56
PRPF40A-207ENST00000471701 EIF4HQ15056 248 aaKnown RBP5.31□□□□□ -1.56
PRPF40A-207ENST00000471701 STILQ15468 1287 aa5.31□□□□□ -1.56
PRPF40A-207ENST00000471701 USP39Q53GS9 565 aaKnown RBP5.31□□□□□ -1.56
PRPF40A-207ENST00000471701 SOGA3Q5TF21 947 aa5.31□□□□□ -1.56
PRPF40A-207ENST00000471701 CISD2Q8N5K1 135 aaKnown RBP5.31□□□□□ -1.56
PRPF40A-207ENST00000471701 CALML6Q8TD86 181 aa5.31□□□□□ -1.56
PRPF40A-207ENST00000471701 GBP4Q96PP9 640 aa5.31□□□□□ -1.56
PRPF40A-207ENST00000471701 DEPDC7Q96QD5 511 aa5.31□□□□□ -1.56
PRPF40A-207ENST00000471701 DPYSL5Q9BPU6 564 aa5.31□□□□□ -1.56
PRPF40A-207ENST00000471701 CSRNP2Q9H175 543 aa5.31□□□□□ -1.56
PRPF40A-207ENST00000471701 KCNH7Q9NS40 1196 aa5.31□□□□□ -1.56
PRPF40A-207ENST00000471701 BTBD7Q9P203 1132 aa5.31□□□□□ -1.56
PRPF40A-207ENST00000471701 Q9UFV3 132 aa5.31□□□□□ -1.56
PRPF40A-207ENST00000471701 LOC101059915A0A1B0GWI6 518 aaPredicted RBP5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms