RNA–Protein interactions for RNA: ENST00000471438.2

CSMD2-208, Transcript of CUB and Sushi multiple domains 2, human

TSL 5

Gene CSMD2, Length 355 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CSMD2-208	ENST00000471438	TAF1C	Q15572	869 aa	Predicted RBP	4.24	□□□□□ -1.73
CSMD2-208	ENST00000471438	ATL3	Q6DD88	541 aa		4.24	□□□□□ -1.73
CSMD2-208	ENST00000471438	SARM1	Q6SZW1	724 aa		4.24	□□□□□ -1.73
CSMD2-208	ENST00000471438	SLC4A10	Q6U841	1118 aa		4.24	□□□□□ -1.73
CSMD2-208	ENST00000471438	TMC4	Q7Z404	712 aa		4.24	□□□□□ -1.73
CSMD2-208	ENST00000471438	PLA2G4D	Q86XP0	818 aa		4.24	□□□□□ -1.73
CSMD2-208	ENST00000471438	FAM129C	Q86XR2	697 aa		4.24	□□□□□ -1.73
CSMD2-208	ENST00000471438	MCAT	Q8IVS2	390 aa	Known RBP	4.24	□□□□□ -1.73
CSMD2-208	ENST00000471438	TMEFF1	Q8IYR6	380 aa		4.24	□□□□□ -1.73
CSMD2-208	ENST00000471438	FBXL16	Q8N461	479 aa		4.24	□□□□□ -1.73
CSMD2-208	ENST00000471438	PDCL2	Q8N4E4	241 aa		4.24	□□□□□ -1.73
CSMD2-208	ENST00000471438	TDRD7	Q8NHU6	1098 aa	Known RBP	4.24	□□□□□ -1.73
CSMD2-208	ENST00000471438	IP6K1	Q92551	441 aa		4.24	□□□□□ -1.73
CSMD2-208	ENST00000471438	RILPL2	Q969X0	211 aa		4.24	□□□□□ -1.73
CSMD2-208	ENST00000471438	CHAMP1	Q96JM3	812 aa		4.24	□□□□□ -1.73
CSMD2-208	ENST00000471438	NOC4L	Q9BVI4	516 aa	Known RBP	4.24	□□□□□ -1.73
CSMD2-208	ENST00000471438	CNTD2	Q9H8S5	307 aa		4.24	□□□□□ -1.73
CSMD2-208	ENST00000471438	ECHDC1	Q9NTX5	307 aa		4.24	□□□□□ -1.73
CSMD2-208	ENST00000471438	GPATCH2	Q9NW75	528 aa		4.24	□□□□□ -1.73
CSMD2-208	ENST00000471438	MIS18A	Q9NYP9	233 aa		4.24	□□□□□ -1.73
CSMD2-208	ENST00000471438	HMG20B	Q9P0W2	317 aa		4.24	□□□□□ -1.73
CSMD2-208	ENST00000471438	TJP2	Q9UDY2	1190 aa		4.24	□□□□□ -1.73
CSMD2-208	ENST00000471438	PARP2	Q9UGN5	583 aa		4.24	□□□□□ -1.73
CSMD2-208	ENST00000471438	DUSP13	Q9UII6	198 aa		4.24	□□□□□ -1.73
CSMD2-208	ENST00000471438	CEP131	Q9UPN4	1083 aa		4.24	□□□□□ -1.73
CSMD2-208	ENST00000471438	SMC3	Q9UQE7	1217 aa		4.24	□□□□□ -1.73
CSMD2-208	ENST00000471438	CNPY2	Q9Y2B0	182 aa		4.24	□□□□□ -1.73
CSMD2-208	ENST00000471438	KIF3A	Q9Y496	699 aa		4.24	□□□□□ -1.73
CSMD2-208	ENST00000471438	PAXBP1	Q9Y5B6	917 aa		4.24	□□□□□ -1.73
CSMD2-208	ENST00000471438	CYP46A1	Q9Y6A2	500 aa		4.24	□□□□□ -1.73
CSMD2-208	ENST00000471438	C5	P01031	1676 aa		4.24	□□□□□ -1.73
CSMD2-208	ENST00000471438	SLIT3	O75094	1523 aa		4.24	□□□□□ -1.73
CSMD2-208	ENST00000471438	ARFGEF2	Q9Y6D5	1785 aa		4.24	□□□□□ -1.73
CSMD2-208	ENST00000471438	MED23	Q9ULK4	1368 aa		4.24	□□□□□ -1.73
CSMD2-208	ENST00000471438	THSD7B	Q9C0I4	1608 aa		4.24	□□□□□ -1.73
CSMD2-208	ENST00000471438	UNC79	Q9P2D8	2635 aa		4.24	□□□□□ -1.73
CSMD2-208	ENST00000471438	TNS3	Q68CZ2	1445 aa		4.23	□□□□□ -1.73
CSMD2-208	ENST00000471438	COL18A1	P39060	1754 aa		4.23	□□□□□ -1.73
CSMD2-208	ENST00000471438	CTAGE5	O15320	804 aa		4.23	□□□□□ -1.73
CSMD2-208	ENST00000471438	NEMF	O60524	1076 aa		4.23	□□□□□ -1.73
CSMD2-208	ENST00000471438	TUBB4A	P04350	444 aa		4.23	□□□□□ -1.73
CSMD2-208	ENST00000471438	PTMA	P06454	111 aa	Known RBP	4.23	□□□□□ -1.73
CSMD2-208	ENST00000471438	NBPF7	P0C2Y1	421 aa	Predicted RBP	4.23	□□□□□ -1.73
CSMD2-208	ENST00000471438	PSMA5	P28066	241 aa		4.23	□□□□□ -1.73
CSMD2-208	ENST00000471438	GJB2	P29033	226 aa		4.23	□□□□□ -1.73
CSMD2-208	ENST00000471438	KCNJ6	P48051	423 aa		4.23	□□□□□ -1.73
CSMD2-208	ENST00000471438	KRT85	P78386	507 aa		4.23	□□□□□ -1.73
CSMD2-208	ENST00000471438	RBM10	P98175	930 aa	Known RBP	4.23	□□□□□ -1.73
CSMD2-208	ENST00000471438	TAGLN	Q01995	201 aa	Known RBP	4.23	□□□□□ -1.73
CSMD2-208	ENST00000471438	PTH1R	Q03431	593 aa		4.23	□□□□□ -1.73
CSMD2-208	ENST00000471438	DHX8	Q14562	1220 aa	Known RBP	4.23	□□□□□ -1.73
CSMD2-208	ENST00000471438	ME3	Q16798	604 aa		4.23	□□□□□ -1.73
CSMD2-208	ENST00000471438	CREB3L3	Q68CJ9	461 aa		4.23	□□□□□ -1.73
CSMD2-208	ENST00000471438	PTF1A	Q7RTS3	328 aa		4.23	□□□□□ -1.73
CSMD2-208	ENST00000471438	CCDC84	Q86UT8	332 aa	Predicted RBP	4.23	□□□□□ -1.73
CSMD2-208	ENST00000471438	DNAAF4	Q8WXU2	420 aa		4.23	□□□□□ -1.73
CSMD2-208	ENST00000471438	MRFAP1L1	Q96HT8	127 aa		4.23	□□□□□ -1.73
CSMD2-208	ENST00000471438	DPH2	Q9BQC3	489 aa	Predicted RBP	4.23	□□□□□ -1.73
CSMD2-208	ENST00000471438	LLPH	Q9BRT6	129 aa	Known RBP	4.23	□□□□□ -1.73
CSMD2-208	ENST00000471438	UPF3B	Q9BZI7	483 aa	Known RBP	4.23	□□□□□ -1.73
CSMD2-208	ENST00000471438	ZSCAN16	Q9H4T2	348 aa	Predicted RBP	4.23	□□□□□ -1.73
CSMD2-208	ENST00000471438	PDRG1	Q9NUG6	133 aa		4.23	□□□□□ -1.73
CSMD2-208	ENST00000471438	DDX19A	Q9NUU7	478 aa	Known RBP	4.23	□□□□□ -1.73
CSMD2-208	ENST00000471438	SMPD4	Q9NXE4	827 aa		4.23	□□□□□ -1.73
CSMD2-208	ENST00000471438	CD2AP	Q9Y5K6	639 aa		4.23	□□□□□ -1.73
CSMD2-208	ENST00000471438	MRVI1	Q9Y6F6	885 aa		4.23	□□□□□ -1.73
CSMD2-208	ENST00000471438	UBR2	Q8IWV8	1755 aa		4.22	□□□□□ -1.73
CSMD2-208	ENST00000471438	PARP4	Q9UKK3	1724 aa	Known RBP	4.22	□□□□□ -1.73
CSMD2-208	ENST00000471438	SMTNL1	A8MU46	457 aa		4.22	□□□□□ -1.73
CSMD2-208	ENST00000471438	SRGAP3	O43295	1099 aa		4.22	□□□□□ -1.73
CSMD2-208	ENST00000471438	LARGE1	O95461	756 aa		4.22	□□□□□ -1.73
CSMD2-208	ENST00000471438	SLPI	P03973	132 aa		4.22	□□□□□ -1.73
CSMD2-208	ENST00000471438	ZKSCAN1	P17029	563 aa	Predicted RBP	4.22	□□□□□ -1.73
CSMD2-208	ENST00000471438	PLCG1	P19174	1290 aa		4.22	□□□□□ -1.73
CSMD2-208	ENST00000471438	CAST	P20810	708 aa	Known RBP	4.22	□□□□□ -1.73
CSMD2-208	ENST00000471438	RPS6KB1	P23443	525 aa		4.22	□□□□□ -1.73
CSMD2-208	ENST00000471438	TNNI2	P48788	182 aa		4.22	□□□□□ -1.73
CSMD2-208	ENST00000471438	AMPH	P49418	695 aa		4.22	□□□□□ -1.73
CSMD2-208	ENST00000471438	EVC	P57679	992 aa		4.22	□□□□□ -1.73
CSMD2-208	ENST00000471438	TOB2	Q14106	344 aa	Predicted RBP	4.22	□□□□□ -1.73
CSMD2-208	ENST00000471438	KRT32	Q14532	448 aa		4.22	□□□□□ -1.73
CSMD2-208	ENST00000471438	IQCB1	Q15051	598 aa		4.22	□□□□□ -1.73
CSMD2-208	ENST00000471438	GAB4	Q2WGN9	574 aa		4.22	□□□□□ -1.73
CSMD2-208	ENST00000471438	ADCK5	Q3MIX3	580 aa		4.22	□□□□□ -1.73
CSMD2-208	ENST00000471438	AMOT	Q4VCS5	1084 aa		4.22	□□□□□ -1.73
CSMD2-208	ENST00000471438	C9orf131	Q5VYM1	1079 aa		4.22	□□□□□ -1.73
CSMD2-208	ENST00000471438	TSHZ3	Q63HK5	1081 aa		4.22	□□□□□ -1.73
CSMD2-208	ENST00000471438	KSR2	Q6VAB6	950 aa		4.22	□□□□□ -1.73
CSMD2-208	ENST00000471438	RELL1	Q8IUW5	271 aa		4.22	□□□□□ -1.73
CSMD2-208	ENST00000471438	CLASRP	Q8N2M8	674 aa	Known RBP	4.22	□□□□□ -1.73
CSMD2-208	ENST00000471438	TP53I13	Q8NBR0	393 aa	Predicted RBP	4.22	□□□□□ -1.73
CSMD2-208	ENST00000471438	PHC3	Q8NDX5	983 aa		4.22	□□□□□ -1.73
CSMD2-208	ENST00000471438	FAM13C	Q8NE31	585 aa		4.22	□□□□□ -1.73
CSMD2-208	ENST00000471438	SMARCC2	Q8TAQ2	1214 aa		4.22	□□□□□ -1.73
CSMD2-208	ENST00000471438	CHMP4C	Q96CF2	233 aa		4.22	□□□□□ -1.73
CSMD2-208	ENST00000471438	SHISA4	Q96DD7	197 aa		4.22	□□□□□ -1.73
CSMD2-208	ENST00000471438	GPATCH3	Q96I76	525 aa		4.22	□□□□□ -1.73
CSMD2-208	ENST00000471438	KAZALD1	Q96I82	304 aa		4.22	□□□□□ -1.73
CSMD2-208	ENST00000471438	PWWP2A	Q96N64	755 aa		4.22	□□□□□ -1.73
CSMD2-208	ENST00000471438	BPIFA3	Q9BQP9	254 aa		4.22	□□□□□ -1.73

Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms