RNA–Protein interactions for RNA: ENST00000471307.6

CCDC39-202, Transcript of coiled-coil domain containing 39, humanhuman

TSL 3

Gene CCDC39, Length 783 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-202ENST00000471307 DBX2Q6ZNG2 339 aa8.28□□□□□ -1.08
CCDC39-202ENST00000471307 OTOP1Q7RTM1 612 aa8.28□□□□□ -1.08
CCDC39-202ENST00000471307 DDX53Q86TM3 631 aaKnown RBP8.28□□□□□ -1.08
CCDC39-202ENST00000471307 SH3TC2Q8TF17 1288 aa8.28□□□□□ -1.08
CCDC39-202ENST00000471307 DLG3Q92796 817 aa8.28□□□□□ -1.08
CCDC39-202ENST00000471307 TMEM260Q9NX78 707 aa8.28□□□□□ -1.08
CCDC39-202ENST00000471307 B3GALT1Q9Y5Z6 326 aa8.28□□□□□ -1.08
CCDC39-202ENST00000471307 SLC4A7Q9Y6M7 1214 aa8.28□□□□□ -1.08
CCDC39-202ENST00000471307 NPEPPSL1A6NEC2 478 aa8.27□□□□□ -1.09
CCDC39-202ENST00000471307 SCDO00767 359 aa8.27□□□□□ -1.09
CCDC39-202ENST00000471307 KCNK3O14649 394 aa8.27□□□□□ -1.09
CCDC39-202ENST00000471307 B4GALT4O60513 344 aa8.27□□□□□ -1.09
CCDC39-202ENST00000471307 HIP1RO75146 1068 aa8.27□□□□□ -1.09
CCDC39-202ENST00000471307 TOP3AQ13472 1001 aaPredicted RBP8.27□□□□□ -1.09
CCDC39-202ENST00000471307 ARHGAP44Q17R89 818 aa8.27□□□□□ -1.09
CCDC39-202ENST00000471307 CCDC144BQ3MJ40 725 aa8.27□□□□□ -1.09
CCDC39-202ENST00000471307 ABHD17CQ6PCB6 329 aa8.27□□□□□ -1.09
CCDC39-202ENST00000471307 C2orf69Q8N8R5 385 aa8.27□□□□□ -1.09
CCDC39-202ENST00000471307 IGSF22Q8N9C0 903 aa8.27□□□□□ -1.09
CCDC39-202ENST00000471307 WNK4Q96J92 1243 aa8.27□□□□□ -1.09
CCDC39-202ENST00000471307 BTBD2Q9BX70 525 aa8.27□□□□□ -1.09
CCDC39-202ENST00000471307 CARD11Q9BXL7 1154 aa8.27□□□□□ -1.09
CCDC39-202ENST00000471307 SEC61A2Q9H9S3 476 aa8.27□□□□□ -1.09
CCDC39-202ENST00000471307 PPP4R1LQ9P1A2 415 aa8.27□□□□□ -1.09
CCDC39-202ENST00000471307 ASB1Q9Y576 335 aa8.27□□□□□ -1.09
CCDC39-202ENST00000471307 RAPGEF3O95398 923 aa8.26□□□□□ -1.09
CCDC39-202ENST00000471307 ASLP04424 464 aa8.26□□□□□ -1.09
CCDC39-202ENST00000471307 USP10Q14694 798 aaKnown RBP8.26□□□□□ -1.09
CCDC39-202ENST00000471307 SEC23AQ15436 765 aa8.26□□□□□ -1.09
CCDC39-202ENST00000471307 CPZQ66K79 652 aa8.26□□□□□ -1.09
CCDC39-202ENST00000471307 ZCCHC8Q6NZY4 707 aaKnown RBP8.26□□□□□ -1.09
CCDC39-202ENST00000471307 BOCQ9BWV1 1114 aa8.26□□□□□ -1.09
CCDC39-202ENST00000471307 C1QTNF3Q9BXJ4 246 aa8.26□□□□□ -1.09
CCDC39-202ENST00000471307 RFPL3O75679 317 aa8.25□□□□□ -1.09
CCDC39-202ENST00000471307 ETV4P43268 484 aa8.25□□□□□ -1.09
CCDC39-202ENST00000471307 MECP2P51608 486 aaKnown RBP8.25□□□□□ -1.09
CCDC39-202ENST00000471307 IL13RA1P78552 427 aa8.25□□□□□ -1.09
CCDC39-202ENST00000471307 WDR72Q3MJ13 1102 aa8.25□□□□□ -1.09
CCDC39-202ENST00000471307 ZNF568Q3ZCX4 644 aa8.25□□□□□ -1.09
CCDC39-202ENST00000471307 CIR1Q86X95 450 aaPredicted RBP8.25□□□□□ -1.09
CCDC39-202ENST00000471307 ASB15Q8WXK1 588 aa8.25□□□□□ -1.09
CCDC39-202ENST00000471307 LOXL4Q96JB6 756 aa8.25□□□□□ -1.09
CCDC39-202ENST00000471307 CLUHP3Q96NS8 147 aa8.25□□□□□ -1.09
CCDC39-202ENST00000471307 JADE2Q9NQC1 790 aa8.25□□□□□ -1.09
CCDC39-202ENST00000471307 ESYT3A0FGR9 886 aa8.24□□□□□ -1.09
CCDC39-202ENST00000471307 FOXP2O15409 715 aa8.24□□□□□ -1.09
CCDC39-202ENST00000471307 MMEP08473 750 aa8.24□□□□□ -1.09
CCDC39-202ENST00000471307 ECE1P42892 770 aa8.24□□□□□ -1.09
CCDC39-202ENST00000471307 KRTAP10-2P60368 255 aa8.24□□□□□ -1.09
CCDC39-202ENST00000471307 ADAM17P78536 824 aa8.24□□□□□ -1.09
CCDC39-202ENST00000471307 IRF9Q00978 393 aa8.24□□□□□ -1.09
CCDC39-202ENST00000471307 ZMAT1Q5H9K5 638 aa8.24□□□□□ -1.09
CCDC39-202ENST00000471307 NPM2Q86SE8 214 aaKnown RBP8.24□□□□□ -1.09
CCDC39-202ENST00000471307 WDR48Q8TAF3 677 aa8.24□□□□□ -1.09
CCDC39-202ENST00000471307 SCYL1Q96KG9 808 aa8.24□□□□□ -1.09
CCDC39-202ENST00000471307 ZDHHC5Q9C0B5 715 aa8.24□□□□□ -1.09
CCDC39-202ENST00000471307 MAFO75444 373 aaPredicted RBP8.23□□□□□ -1.09
CCDC39-202ENST00000471307 CNOT4O95628 575 aaKnown RBP8.23□□□□□ -1.09
CCDC39-202ENST00000471307 MPIG6BO95866 241 aa8.23□□□□□ -1.09
CCDC39-202ENST00000471307 ZBTB48P10074 688 aaPredicted RBP8.23□□□□□ -1.09
CCDC39-202ENST00000471307 MC4RP32245 332 aa8.23□□□□□ -1.09
CCDC39-202ENST00000471307 FLT3P36888 993 aa8.23□□□□□ -1.09
CCDC39-202ENST00000471307 CC2D1AQ6P1N0 951 aaPredicted RBP8.23□□□□□ -1.09
CCDC39-202ENST00000471307 LIMS2Q7Z4I7 341 aa8.23□□□□□ -1.09
CCDC39-202ENST00000471307 CHST13Q8NET6 341 aa8.23□□□□□ -1.09
CCDC39-202ENST00000471307 GBP4Q96PP9 640 aa8.23□□□□□ -1.09
CCDC39-202ENST00000471307 AMNQ9BXJ7 453 aa8.23□□□□□ -1.09
CCDC39-202ENST00000471307 MEGF9Q9H1U4 602 aa8.23□□□□□ -1.09
CCDC39-202ENST00000471307 OR10A5Q9H207 317 aa8.23□□□□□ -1.09
CCDC39-202ENST00000471307 SAMD15Q9P1V8 674 aa8.23□□□□□ -1.09
CCDC39-202ENST00000471307 OPA1O60313 960 aa8.22□□□□□ -1.09
CCDC39-202ENST00000471307 TM4SF20Q53R12 229 aa8.22□□□□□ -1.09
CCDC39-202ENST00000471307 FSTL4Q6MZW2 842 aa8.22□□□□□ -1.09
CCDC39-202ENST00000471307 CHST14Q8NCH0 376 aa8.22□□□□□ -1.09
CCDC39-202ENST00000471307 DNERQ8NFT8 737 aa8.22□□□□□ -1.09
CCDC39-202ENST00000471307 CALML6Q8TD86 181 aa8.22□□□□□ -1.09
CCDC39-202ENST00000471307 MSL2Q9HCI7 577 aa8.22□□□□□ -1.09
CCDC39-202ENST00000471307 CABP5Q9NP86 173 aa8.22□□□□□ -1.09
CCDC39-202ENST00000471307 INTS7Q9NVH2 962 aaKnown RBP8.22□□□□□ -1.09
CCDC39-202ENST00000471307 UCKL1Q9NWZ5 548 aa8.22□□□□□ -1.09
CCDC39-202ENST00000471307 GPR42O15529 346 aa8.21□□□□□ -1.1
CCDC39-202ENST00000471307 DNAJC8O75937 253 aaPredicted RBP8.21□□□□□ -1.1
CCDC39-202ENST00000471307 FNTBP49356 437 aa8.21□□□□□ -1.1
CCDC39-202ENST00000471307 EIF4HQ15056 248 aaKnown RBP8.21□□□□□ -1.1
CCDC39-202ENST00000471307 TCEA2Q15560 299 aa8.21□□□□□ -1.1
CCDC39-202ENST00000471307 CATSPEREQ5SY80 951 aa8.21□□□□□ -1.1
CCDC39-202ENST00000471307 KANK2Q63ZY3 851 aa8.21□□□□□ -1.1
CCDC39-202ENST00000471307 GPR155Q7Z3F1 870 aa8.21□□□□□ -1.1
CCDC39-202ENST00000471307 HIPK4Q8NE63 616 aa8.21□□□□□ -1.1
CCDC39-202ENST00000471307 C8orf49Q96NF6 230 aa8.21□□□□□ -1.1
CCDC39-202ENST00000471307 GPR20Q99678 358 aa8.21□□□□□ -1.1
CCDC39-202ENST00000471307 KRTAP3-1Q9BYR8 98 aa8.21□□□□□ -1.1
CCDC39-202ENST00000471307 MYRFQ9Y2G1 1151 aa8.21□□□□□ -1.1
CCDC39-202ENST00000471307 RASSF10A6NK89 507 aa8.2□□□□□ -1.1
CCDC39-202ENST00000471307 PATE3B3GLJ2 98 aa8.2□□□□□ -1.1
CCDC39-202ENST00000471307 C1QTNF3-AMACRE9PGA6 284 aa8.2□□□□□ -1.1
CCDC39-202ENST00000471307 GOLGA6L22H0YM25 854 aa8.2□□□□□ -1.1
CCDC39-202ENST00000471307 M0R2C6 588 aa8.2□□□□□ -1.1
CCDC39-202ENST00000471307 GLRX3O76003 335 aaKnown RBP8.2□□□□□ -1.1
CCDC39-202ENST00000471307 HMGCRP04035 888 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms