RNA–Protein interactions for RNA: ENST00000471250.5

U2AF1-208, Transcript of U2 small nuclear RNA auxiliary factor 1, human

TSL 2

Gene U2AF1, Length 1,676 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
U2AF1-208	ENST00000471250	VSTM4	Q8IW00	320 aa		28.77	■■■□□ 2.2
U2AF1-208	ENST00000471250	ANKRD20A12P	Q8NF67	263 aa		28.77	■■■□□ 2.2
U2AF1-208	ENST00000471250	ZNF830	Q96NB3	372 aa	Predicted RBP	28.77	■■■□□ 2.2
U2AF1-208	ENST00000471250	ODF2L	Q9ULJ1	636 aa		28.77	■■■□□ 2.2
U2AF1-208	ENST00000471250	PASK	Q96RG2	1323 aa		28.77	■■■□□ 2.2
U2AF1-208	ENST00000471250	YWHAB	P31946	246 aa	Known RBP	28.77	■■■□□ 2.2
U2AF1-208	ENST00000471250	RARRES1	P49788	294 aa		28.77	■■■□□ 2.2
U2AF1-208	ENST00000471250	ACTR2	P61160	394 aa		28.77	■■■□□ 2.2
U2AF1-208	ENST00000471250	ABHD15	Q6UXT9	468 aa		28.77	■■■□□ 2.2
U2AF1-208	ENST00000471250	FILIP1	Q7Z7B0	1213 aa		28.77	■■■□□ 2.2
U2AF1-208	ENST00000471250	ANKEF1	Q9NU02	776 aa		28.77	■■■□□ 2.2
U2AF1-208	ENST00000471250	PLXNB2	O15031	1838 aa		28.76	■■■□□ 2.19
U2AF1-208	ENST00000471250	DKC1	O60832	514 aa	Known RBP eCLIP	28.76	■■■□□ 2.19
U2AF1-208	ENST00000471250	FAM13A	O94988	1023 aa		28.76	■■■□□ 2.19
U2AF1-208	ENST00000471250	TGFB3	P10600	412 aa		28.76	■■■□□ 2.19
U2AF1-208	ENST00000471250	EEF1G	P26641	437 aa	Known RBP	28.76	■■■□□ 2.19
U2AF1-208	ENST00000471250	FILIP1L	Q4L180	1135 aa		28.76	■■■□□ 2.19
U2AF1-208	ENST00000471250	PADI6	Q6TGC4	694 aa		28.76	■■■□□ 2.19
U2AF1-208	ENST00000471250	SAPCD2	Q86UD0	394 aa		28.76	■■■□□ 2.19
U2AF1-208	ENST00000471250	SCFD1	Q8WVM8	642 aa		28.76	■■■□□ 2.19
U2AF1-208	ENST00000471250	MANSC4	A6NHS7	340 aa	Predicted RBP	28.75	■■■□□ 2.19
U2AF1-208	ENST00000471250	ZNF131	P52739	623 aa		28.75	■■■□□ 2.19
U2AF1-208	ENST00000471250	RGMB	Q6NW40	437 aa		28.75	■■■□□ 2.19
U2AF1-208	ENST00000471250	EPM2AIP1	Q7L775	607 aa	Predicted RBP	28.75	■■■□□ 2.19
U2AF1-208	ENST00000471250	ABRA	Q8N0Z2	381 aa		28.75	■■■□□ 2.19
U2AF1-208	ENST00000471250	TSG101	Q99816	390 aa		28.75	■■■□□ 2.19
U2AF1-208	ENST00000471250	KCNF1	Q9H3M0	494 aa		28.75	■■■□□ 2.19
U2AF1-208	ENST00000471250	OLFML3	Q9NRN5	406 aa		28.75	■■■□□ 2.19
U2AF1-208	ENST00000471250	GABBR1	Q9UBS5	961 aa		28.75	■■■□□ 2.19
U2AF1-208	ENST00000471250	ATG7	O95352	703 aa		28.74	■■■□□ 2.19
U2AF1-208	ENST00000471250	UBA1	P22314	1058 aa	Known RBP	28.74	■■■□□ 2.19
U2AF1-208	ENST00000471250	MIS18BP1	Q6P0N0	1132 aa		28.74	■■■□□ 2.19
U2AF1-208	ENST00000471250	CYFIP1	Q7L576	1253 aa		28.74	■■■□□ 2.19
U2AF1-208	ENST00000471250	FAM114A1	Q8IWE2	563 aa		28.74	■■■□□ 2.19
U2AF1-208	ENST00000471250	ATP6V0A1	Q93050	837 aa		28.74	■■■□□ 2.19
U2AF1-208	ENST00000471250	RTN4	Q9NQC3	1192 aa	Known RBP	28.74	■■■□□ 2.19
U2AF1-208	ENST00000471250	MAGEC2	Q9UBF1	373 aa	Predicted RBP	28.74	■■■□□ 2.19
U2AF1-208	ENST00000471250	SEL1L	Q9UBV2	794 aa		28.74	■■■□□ 2.19
U2AF1-208	ENST00000471250	TELO2	Q9Y4R8	837 aa		28.74	■■■□□ 2.19
U2AF1-208	ENST00000471250	STRN	O43815	780 aa		28.74	■■■□□ 2.19
U2AF1-208	ENST00000471250	SUPT20HL2	P0C7V6	817 aa		28.74	■■■□□ 2.19
U2AF1-208	ENST00000471250	COPB1	P53618	953 aa	Known RBP	28.74	■■■□□ 2.19
U2AF1-208	ENST00000471250	GSDMD	P57764	484 aa		28.74	■■■□□ 2.19
U2AF1-208	ENST00000471250	NEDD9	Q14511	834 aa		28.74	■■■□□ 2.19
U2AF1-208	ENST00000471250	ZCWPW2	Q504Y3	356 aa		28.74	■■■□□ 2.19
U2AF1-208	ENST00000471250	PARVG	Q9HBI0	331 aa		28.74	■■■□□ 2.19
U2AF1-208	ENST00000471250	ZCCHC17	Q9NP64	241 aa	Known RBP	28.74	■■■□□ 2.19
U2AF1-208	ENST00000471250	ASB14	A6NK59	587 aa		28.73	■■■□□ 2.19
U2AF1-208	ENST00000471250	FAM110C	Q1W6H9	321 aa		28.73	■■■□□ 2.19
U2AF1-208	ENST00000471250	ZNF792	Q3KQV3	632 aa		28.73	■■■□□ 2.19
U2AF1-208	ENST00000471250	SWSAP1	Q6NVH7	229 aa		28.73	■■■□□ 2.19
U2AF1-208	ENST00000471250	KCNV1	Q6PIU1	500 aa		28.73	■■■□□ 2.19
U2AF1-208	ENST00000471250	POLD4	Q9HCU8	107 aa		28.73	■■■□□ 2.19
U2AF1-208	ENST00000471250	FGFR1OP	O95684	399 aa	Known RBP	28.72	■■■□□ 2.19
U2AF1-208	ENST00000471250	MSN	P26038	577 aa	Known RBP	28.72	■■■□□ 2.19
U2AF1-208	ENST00000471250	CASP5	P51878	434 aa		28.72	■■■□□ 2.19
U2AF1-208	ENST00000471250	SP4	Q02446	784 aa		28.72	■■■□□ 2.19
U2AF1-208	ENST00000471250	MYCT1	Q8N699	235 aa		28.72	■■■□□ 2.19
U2AF1-208	ENST00000471250	KCTD10	Q9H3F6	313 aa		28.72	■■■□□ 2.19
U2AF1-208	ENST00000471250	MRPL44	Q9H9J2	332 aa	Known RBP	28.72	■■■□□ 2.19
U2AF1-208	ENST00000471250	SYNGAP1	Q96PV0	1343 aa		28.71	■■■□□ 2.19
U2AF1-208	ENST00000471250	SFI1	A8K8P3	1242 aa		28.71	■■■□□ 2.19
U2AF1-208	ENST00000471250	TEX33	O43247	280 aa		28.71	■■■□□ 2.19
U2AF1-208	ENST00000471250	ZNF862	O60290	1169 aa		28.71	■■■□□ 2.19
U2AF1-208	ENST00000471250	SORBS3	O60504	671 aa		28.71	■■■□□ 2.19
U2AF1-208	ENST00000471250	HIP1R	O75146	1068 aa		28.71	■■■□□ 2.19
U2AF1-208	ENST00000471250	STBD1	O95210	358 aa		28.71	■■■□□ 2.19
U2AF1-208	ENST00000471250	MAPK7	Q13164	816 aa		28.71	■■■□□ 2.19
U2AF1-208	ENST00000471250	BMT2	Q1RMZ1	405 aa		28.71	■■■□□ 2.19
U2AF1-208	ENST00000471250	EEPD1	Q7L9B9	569 aa		28.71	■■■□□ 2.19
U2AF1-208	ENST00000471250	CCDC60	Q8IWA6	550 aa	Predicted RBP	28.71	■■■□□ 2.19
U2AF1-208	ENST00000471250	CACTIN	Q8WUQ7	758 aa	Known RBP	28.71	■■■□□ 2.19
U2AF1-208	ENST00000471250	CCDC43	Q96MW1	224 aa	Known RBP	28.71	■■■□□ 2.19
U2AF1-208	ENST00000471250	TIPIN	Q9BVW5	301 aa		28.71	■■■□□ 2.19
U2AF1-208	ENST00000471250	TAB2	Q9NYJ8	693 aa		28.71	■■■□□ 2.19
U2AF1-208	ENST00000471250	PLXNA1	Q9UIW2	1896 aa		28.71	■■■□□ 2.19
U2AF1-208	ENST00000471250	BACH1	O14867	736 aa		28.7	■■■□□ 2.19
U2AF1-208	ENST00000471250	FARP2	O94887	1054 aa	Predicted RBP	28.7	■■■□□ 2.19
U2AF1-208	ENST00000471250	SLC10A3	P09131	477 aa		28.7	■■■□□ 2.19
U2AF1-208	ENST00000471250	MYB	P10242	640 aa		28.7	■■■□□ 2.19
U2AF1-208	ENST00000471250	ADORA2A	P29274	412 aa		28.7	■■■□□ 2.19
U2AF1-208	ENST00000471250	OTUD6A	Q7L8S5	288 aa		28.7	■■■□□ 2.19
U2AF1-208	ENST00000471250	NELFCD	Q8IXH7	590 aa		28.7	■■■□□ 2.19
U2AF1-208	ENST00000471250	ZNF507	Q8TCN5	953 aa		28.7	■■■□□ 2.19
U2AF1-208	ENST00000471250	IGSF9B	Q9UPX0	1349 aa		28.7	■■■□□ 2.18
U2AF1-208	ENST00000471250	IGF2BP3	O00425	579 aa	Known RBP eCLIP	28.7	■■■□□ 2.18
U2AF1-208	ENST00000471250	N4BP3	O15049	544 aa		28.7	■■■□□ 2.18
U2AF1-208	ENST00000471250	PBX1	P40424	430 aa		28.7	■■■□□ 2.18
U2AF1-208	ENST00000471250	XKR9	Q5GH70	373 aa		28.7	■■■□□ 2.18
U2AF1-208	ENST00000471250	UTP14C	Q5TAP6	766 aa	Known RBP	28.7	■■■□□ 2.18
U2AF1-208	ENST00000471250	ANO5	Q75V66	913 aa		28.7	■■■□□ 2.18
U2AF1-208	ENST00000471250	CREBRF	Q8IUR6	639 aa		28.7	■■■□□ 2.18
U2AF1-208	ENST00000471250	LRRC8A	Q8IWT6	810 aa		28.7	■■■□□ 2.18
U2AF1-208	ENST00000471250	DAW1	Q8N136	415 aa		28.7	■■■□□ 2.18
U2AF1-208	ENST00000471250	CNOT6L	Q96LI5	555 aa	Known RBP	28.7	■■■□□ 2.18
U2AF1-208	ENST00000471250	VPS16	Q9H269	839 aa		28.7	■■■□□ 2.18
U2AF1-208	ENST00000471250	DDX41	Q9UJV9	622 aa	Known RBP	28.7	■■■□□ 2.18
U2AF1-208	ENST00000471250	IVNS1ABP	Q9Y6Y0	642 aa		28.7	■■■□□ 2.18
U2AF1-208	ENST00000471250	MYH11	P35749	1972 aa		28.69	■■■□□ 2.18
U2AF1-208	ENST00000471250	ADGRA2	Q96PE1	1338 aa		28.69	■■■□□ 2.18

Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms