RNA–Protein interactions for RNA: ENST00000471167.1

PRPF40A-206, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 2

Gene PRPF40A, Length 333 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-206ENST00000471167 STILQ15468 1287 aa7.53□□□□□ -1.2
PRPF40A-206ENST00000471167 FNDC3BQ53EP0 1204 aaKnown RBP7.53□□□□□ -1.2
PRPF40A-206ENST00000471167 CATSPEREQ5SY80 951 aa7.53□□□□□ -1.2
PRPF40A-206ENST00000471167 GPR155Q7Z3F1 870 aa7.53□□□□□ -1.2
PRPF40A-206ENST00000471167 ASB15Q8WXK1 588 aa7.53□□□□□ -1.2
PRPF40A-206ENST00000471167 MRFAP1L1Q96HT8 127 aa7.53□□□□□ -1.2
PRPF40A-206ENST00000471167 MEGF9Q9H1U4 602 aa7.53□□□□□ -1.2
PRPF40A-206ENST00000471167 PRAMEF25A6NGN4 478 aa7.52□□□□□ -1.21
PRPF40A-206ENST00000471167 EPHB4P54760 987 aa7.52□□□□□ -1.21
PRPF40A-206ENST00000471167 TOP3AQ13472 1001 aaPredicted RBP7.52□□□□□ -1.21
PRPF40A-206ENST00000471167 BORAQ6PGQ7 559 aa7.52□□□□□ -1.21
PRPF40A-206ENST00000471167 UCKL1Q9NWZ5 548 aa7.52□□□□□ -1.21
PRPF40A-206ENST00000471167 FBXO21O94952 628 aa7.51□□□□□ -1.21
PRPF40A-206ENST00000471167 PPP2CBP62714 309 aa7.51□□□□□ -1.21
PRPF40A-206ENST00000471167 PPP2CAP67775 309 aa7.51□□□□□ -1.21
PRPF40A-206ENST00000471167 TKFCQ3LXA3 575 aa7.51□□□□□ -1.21
PRPF40A-206ENST00000471167 KANK2Q63ZY3 851 aa7.51□□□□□ -1.21
PRPF40A-206ENST00000471167 ZCCHC8Q6NZY4 707 aaKnown RBP7.51□□□□□ -1.21
PRPF40A-206ENST00000471167 FAM124AQ86V42 546 aa7.51□□□□□ -1.21
PRPF40A-206ENST00000471167 FOXRED1Q96CU9 486 aaPredicted RBP7.51□□□□□ -1.21
PRPF40A-206ENST00000471167 WNK4Q96J92 1243 aa7.51□□□□□ -1.21
PRPF40A-206ENST00000471167 WWC2-AS2Q96NR7 200 aa7.51□□□□□ -1.21
PRPF40A-206ENST00000471167 INCENPQ9NQS7 918 aa7.51□□□□□ -1.21
PRPF40A-206ENST00000471167 GALNT8Q9NY28 637 aa7.51□□□□□ -1.21
PRPF40A-206ENST00000471167 ARHGAP28Q9P2N2 729 aa7.51□□□□□ -1.21
PRPF40A-206ENST00000471167 CNOT11Q9UKZ1 510 aaKnown RBP7.51□□□□□ -1.21
PRPF40A-206ENST00000471167 H0Y858 1186 aa7.5□□□□□ -1.21
PRPF40A-206ENST00000471167 K7ESM1 405 aa7.5□□□□□ -1.21
PRPF40A-206ENST00000471167 M0R2C6 588 aa7.5□□□□□ -1.21
PRPF40A-206ENST00000471167 LAMTOR5O43504 91 aa7.5□□□□□ -1.21
PRPF40A-206ENST00000471167 ASMTLO95671 621 aa7.5□□□□□ -1.21
PRPF40A-206ENST00000471167 CREB3L3Q68CJ9 461 aa7.5□□□□□ -1.21
PRPF40A-206ENST00000471167 LARP4Q71RC2 724 aaKnown RBP eCLIP7.5□□□□□ -1.21
PRPF40A-206ENST00000471167 GGNQ86UU5 652 aa7.5□□□□□ -1.21
PRPF40A-206ENST00000471167 CD248Q9HCU0 757 aa7.5□□□□□ -1.21
PRPF40A-206ENST00000471167 KCNH7Q9NS40 1196 aa7.5□□□□□ -1.21
PRPF40A-206ENST00000471167 SLC12A8A0AV02 714 aa7.49□□□□□ -1.21
PRPF40A-206ENST00000471167 GOLGA6L22H0YM25 854 aa7.49□□□□□ -1.21
PRPF40A-206ENST00000471167 NPTXRO95502 500 aa7.49□□□□□ -1.21
PRPF40A-206ENST00000471167 SDHAP31040 664 aa7.49□□□□□ -1.21
PRPF40A-206ENST00000471167 PABPC4Q13310 644 aaKnown RBP eCLIP7.49□□□□□ -1.21
PRPF40A-206ENST00000471167 ICAM4Q14773 271 aa7.49□□□□□ -1.21
PRPF40A-206ENST00000471167 TBR1Q16650 682 aa7.49□□□□□ -1.21
PRPF40A-206ENST00000471167 C21orf62-AS1Q17RA5 79 aa7.49□□□□□ -1.21
PRPF40A-206ENST00000471167 RTN4RL1Q86UN2 441 aaPredicted RBP7.49□□□□□ -1.21
PRPF40A-206ENST00000471167 BCL6BQ8N143 479 aaPredicted RBP7.49□□□□□ -1.21
PRPF40A-206ENST00000471167 DNERQ8NFT8 737 aa7.49□□□□□ -1.21
PRPF40A-206ENST00000471167 BARX1Q9HBU1 254 aaPredicted RBP7.49□□□□□ -1.21
PRPF40A-206ENST00000471167 SAMD15Q9P1V8 674 aa7.49□□□□□ -1.21
PRPF40A-206ENST00000471167 POLD1P28340 1107 aa7.48□□□□□ -1.21
PRPF40A-206ENST00000471167 MAGEA10P43363 369 aaPredicted RBP7.48□□□□□ -1.21
PRPF40A-206ENST00000471167 IRF9Q00978 393 aa7.48□□□□□ -1.21
PRPF40A-206ENST00000471167 NOLC1Q14978 699 aaKnown RBP eCLIP7.48□□□□□ -1.21
PRPF40A-206ENST00000471167 SPATS1Q496A3 300 aa7.48□□□□□ -1.21
PRPF40A-206ENST00000471167 JAZF1Q86VZ6 243 aa7.48□□□□□ -1.21
PRPF40A-206ENST00000471167 C2orf69Q8N8R5 385 aa7.48□□□□□ -1.21
PRPF40A-206ENST00000471167 GBP4Q96PP9 640 aa7.48□□□□□ -1.21
PRPF40A-206ENST00000471167 MATN2O00339 956 aa7.47□□□□□ -1.21
PRPF40A-206ENST00000471167 FOXP2O15409 715 aa7.47□□□□□ -1.21
PRPF40A-206ENST00000471167 RFPL3O75679 317 aa7.47□□□□□ -1.21
PRPF40A-206ENST00000471167 ASLP04424 464 aa7.47□□□□□ -1.21
PRPF40A-206ENST00000471167 IGFALSP35858 605 aa7.47□□□□□ -1.21
PRPF40A-206ENST00000471167 ECE1P42892 770 aa7.47□□□□□ -1.21
PRPF40A-206ENST00000471167 ADAM17P78536 824 aa7.47□□□□□ -1.21
PRPF40A-206ENST00000471167 CD83Q01151 205 aa7.47□□□□□ -1.21
PRPF40A-206ENST00000471167 TMEM132BQ14DG7 1078 aa7.47□□□□□ -1.21
PRPF40A-206ENST00000471167 CDSNQ15517 529 aa7.47□□□□□ -1.21
PRPF40A-206ENST00000471167 SAMD11Q96NU1 681 aa7.47□□□□□ -1.21
PRPF40A-206ENST00000471167 BTBD2Q9BX70 525 aa7.47□□□□□ -1.21
PRPF40A-206ENST00000471167 ZDHHC5Q9C0B5 715 aa7.47□□□□□ -1.21
PRPF40A-206ENST00000471167 ST6GALNAC2Q9UJ37 374 aa7.47□□□□□ -1.21
PRPF40A-206ENST00000471167 CD2APQ9Y5K6 639 aa7.47□□□□□ -1.21
PRPF40A-206ENST00000471167 SLC4A7Q9Y6M7 1214 aa7.47□□□□□ -1.21
PRPF40A-206ENST00000471167 PRAMEF22A3QJZ6 481 aa7.46□□□□□ -1.22
PRPF40A-206ENST00000471167 ADRB1P08588 477 aa7.46□□□□□ -1.22
PRPF40A-206ENST00000471167 ADCY8P40145 1251 aa7.46□□□□□ -1.22
PRPF40A-206ENST00000471167 REXO1L1PQ8IX06 675 aa7.46□□□□□ -1.22
PRPF40A-206ENST00000471167 C8orf49Q96NF6 230 aa7.46□□□□□ -1.22
PRPF40A-206ENST00000471167 MTFR1LQ9H019 292 aa7.46□□□□□ -1.22
PRPF40A-206ENST00000471167 SMPD4Q9NXE4 827 aa7.46□□□□□ -1.22
PRPF40A-206ENST00000471167 ZNF536O15090 1300 aa7.46□□□□□ -1.22
PRPF40A-206ENST00000471167 CBX4O00257 560 aa7.45□□□□□ -1.22
PRPF40A-206ENST00000471167 EIF4HQ15056 248 aaKnown RBP7.45□□□□□ -1.22
PRPF40A-206ENST00000471167 ZNF827Q17R98 1081 aa7.45□□□□□ -1.22
PRPF40A-206ENST00000471167 RNF151Q2KHN1 245 aa7.45□□□□□ -1.22
PRPF40A-206ENST00000471167 TRIM68Q6AZZ1 485 aa7.45□□□□□ -1.22
PRPF40A-206ENST00000471167 CC2D1AQ6P1N0 951 aaPredicted RBP7.45□□□□□ -1.22
PRPF40A-206ENST00000471167 ARHGEF18Q6ZSZ5 1173 aa7.45□□□□□ -1.22
PRPF40A-206ENST00000471167 EP400NLQ6ZTU2 488 aa7.45□□□□□ -1.22
PRPF40A-206ENST00000471167 RALYLQ86SE5 291 aaKnown RBP7.45□□□□□ -1.22
PRPF40A-206ENST00000471167 CHST14Q8NCH0 376 aa7.45□□□□□ -1.22
PRPF40A-206ENST00000471167 GNRHR2Q96P88 292 aa7.45□□□□□ -1.22
PRPF40A-206ENST00000471167 BOCQ9BWV1 1114 aa7.45□□□□□ -1.22
PRPF40A-206ENST00000471167 C1QTNF3Q9BXJ4 246 aa7.45□□□□□ -1.22
PRPF40A-206ENST00000471167 CDC42EP3Q9UKI2 254 aa7.45□□□□□ -1.22
PRPF40A-206ENST00000471167 ASB1Q9Y576 335 aa7.45□□□□□ -1.22
PRPF40A-206ENST00000471167 PTPDC1A2A3K4 754 aa7.44□□□□□ -1.22
PRPF40A-206ENST00000471167 PATE3B3GLJ2 98 aa7.44□□□□□ -1.22
PRPF40A-206ENST00000471167 OPA1O60313 960 aa7.44□□□□□ -1.22
PRPF40A-206ENST00000471167 KRT37O76014 449 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms