RNA–Protein interactions for RNA: ENST00000470942.1

HDAC6-218, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 668 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-218ENST00000470942 SLC5A5Q92911 643 aa17.75■□□□□ 0.43
HDAC6-218ENST00000470942 GJA10Q969M2 543 aa17.75■□□□□ 0.43
HDAC6-218ENST00000470942 RIT2Q99578 217 aa17.75■□□□□ 0.43
HDAC6-218ENST00000470942 KIF2CQ99661 725 aa17.75■□□□□ 0.43
HDAC6-218ENST00000470942 FAM49AQ9H0Q0 323 aaPredicted RBP17.75■□□□□ 0.43
HDAC6-218ENST00000470942 BRMS1Q9HCU9 246 aa17.75■□□□□ 0.43
HDAC6-218ENST00000470942 GABBR1Q9UBS5 961 aa17.75■□□□□ 0.43
HDAC6-218ENST00000470942 EVPLQ92817 2033 aa17.75■□□□□ 0.43
HDAC6-218ENST00000470942 MICAL3Q7RTP6 2002 aa17.74■□□□□ 0.43
HDAC6-218ENST00000470942 WDR64B1ANS9 1081 aa17.74■□□□□ 0.43
HDAC6-218ENST00000470942 CHRNA1P02708 482 aa17.74■□□□□ 0.43
HDAC6-218ENST00000470942 TRIM29Q14134 588 aa17.74■□□□□ 0.43
HDAC6-218ENST00000470942 PLEKHG4Q58EX7 1191 aa17.74■□□□□ 0.43
HDAC6-218ENST00000470942 FAM26DQ5JW98 314 aa17.74■□□□□ 0.43
HDAC6-218ENST00000470942 MOXD1Q6UVY6 613 aa17.74■□□□□ 0.43
HDAC6-218ENST00000470942 NEK8Q86SG6 692 aa17.74■□□□□ 0.43
HDAC6-218ENST00000470942 CCDC83Q8IWF9 413 aa17.74■□□□□ 0.43
HDAC6-218ENST00000470942 SEPT8Q92599 483 aa17.74■□□□□ 0.43
HDAC6-218ENST00000470942 ZSCAN31Q96LW9 406 aaPredicted RBP17.74■□□□□ 0.43
HDAC6-218ENST00000470942 ZBED2Q9BTP6 218 aa17.74■□□□□ 0.43
HDAC6-218ENST00000470942 UPF2Q9HAU5 1272 aaKnown RBP17.74■□□□□ 0.43
HDAC6-218ENST00000470942 DISC1Q9NRI5 854 aa17.74■□□□□ 0.43
HDAC6-218ENST00000470942 DDX25Q9UHL0 483 aaKnown RBP17.74■□□□□ 0.43
HDAC6-218ENST00000470942 LOXHD1Q8IVV2 1947 aa17.74■□□□□ 0.43
HDAC6-218ENST00000470942 SIP14410 1827 aa17.73■□□□□ 0.43
HDAC6-218ENST00000470942 CHD9Q3L8U1 2897 aa17.73■□□□□ 0.43
HDAC6-218ENST00000470942 ATP4AP20648 1035 aa17.73■□□□□ 0.43
HDAC6-218ENST00000470942 RBM25P49756 843 aaKnown RBP17.73■□□□□ 0.43
HDAC6-218ENST00000470942 DEFB103AP81534 67 aa17.73■□□□□ 0.43
HDAC6-218ENST00000470942 ST3GAL1Q11201 340 aa17.73■□□□□ 0.43
HDAC6-218ENST00000470942 ZNF484Q5JVG2 852 aa17.73■□□□□ 0.43
HDAC6-218ENST00000470942 PPP2R2DQ66LE6 453 aa17.73■□□□□ 0.43
HDAC6-218ENST00000470942 MTHFD1LQ6UB35 978 aa17.73■□□□□ 0.43
HDAC6-218ENST00000470942 TMCO2Q7Z6W1 182 aaPredicted RBP17.73■□□□□ 0.43
HDAC6-218ENST00000470942 RPAINQ86UA6 219 aa17.73■□□□□ 0.43
HDAC6-218ENST00000470942 MBOAT7Q96N66 472 aa17.73■□□□□ 0.43
HDAC6-218ENST00000470942 OSBPL7Q9BZF2 842 aa17.73■□□□□ 0.43
HDAC6-218ENST00000470942 UNC45AQ9H3U1 944 aa17.73■□□□□ 0.43
HDAC6-218ENST00000470942 PCDHA2Q9Y5H9 948 aa17.73■□□□□ 0.43
HDAC6-218ENST00000470942 MAFBQ9Y5Q3 323 aaPredicted RBP17.73■□□□□ 0.43
HDAC6-218ENST00000470942 CDY2AQ9Y6F7 541 aa17.73■□□□□ 0.43
HDAC6-218ENST00000470942 COL1A2P08123 1366 aa17.72■□□□□ 0.43
HDAC6-218ENST00000470942 TLL1O43897 1013 aa17.72■□□□□ 0.43
HDAC6-218ENST00000470942 CCNT1O60563 726 aaKnown RBP17.72■□□□□ 0.43
HDAC6-218ENST00000470942 PSMD10O75832 226 aa17.72■□□□□ 0.43
HDAC6-218ENST00000470942 RPLP2P05387 115 aaKnown RBP17.72■□□□□ 0.43
HDAC6-218ENST00000470942 CA3P07451 260 aa17.72■□□□□ 0.43
HDAC6-218ENST00000470942 FOSL2P15408 326 aa17.72■□□□□ 0.43
HDAC6-218ENST00000470942 KLRC1P26715 233 aa17.72■□□□□ 0.43
HDAC6-218ENST00000470942 SFNP31947 248 aa17.72■□□□□ 0.43
HDAC6-218ENST00000470942 JAK3P52333 1124 aa17.72■□□□□ 0.43
HDAC6-218ENST00000470942 MRPS6P82932 125 aaKnown RBP17.72■□□□□ 0.43
HDAC6-218ENST00000470942 TMEM62Q0P6H9 643 aa17.72■□□□□ 0.43
HDAC6-218ENST00000470942 NR5A1Q13285 461 aa17.72■□□□□ 0.43
HDAC6-218ENST00000470942 IER5Q5VY09 327 aa17.72■□□□□ 0.43
HDAC6-218ENST00000470942 MIER3Q7Z3K6 550 aa17.72■□□□□ 0.43
HDAC6-218ENST00000470942 BBXQ8WY36 941 aaPredicted RBP17.72■□□□□ 0.43
HDAC6-218ENST00000470942 M0QZ92 97 aa17.71■□□□□ 0.43
HDAC6-218ENST00000470942 SLC37A4O43826 429 aa17.71■□□□□ 0.43
HDAC6-218ENST00000470942 MARCH6O60337 910 aa17.71■□□□□ 0.43
HDAC6-218ENST00000470942 MMP1P03956 469 aa17.71■□□□□ 0.43
HDAC6-218ENST00000470942 AMHP03971 560 aa17.71■□□□□ 0.43
HDAC6-218ENST00000470942 GHRP10912 638 aa17.71■□□□□ 0.43
HDAC6-218ENST00000470942 MGAT3Q09327 533 aa17.71■□□□□ 0.43
HDAC6-218ENST00000470942 EARS2Q5JPH6 523 aaKnown RBP17.71■□□□□ 0.43
HDAC6-218ENST00000470942 KRT40Q6A162 431 aa17.71■□□□□ 0.43
HDAC6-218ENST00000470942 FAM117BQ6P1L5 589 aa17.71■□□□□ 0.43
HDAC6-218ENST00000470942 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.71■□□□□ 0.43
HDAC6-218ENST00000470942 ETNPPLQ8TBG4 499 aa17.71■□□□□ 0.43
HDAC6-218ENST00000470942 APBB2Q92870 758 aa17.71■□□□□ 0.43
HDAC6-218ENST00000470942 NAP1L4Q99733 375 aaKnown RBP17.71■□□□□ 0.43
HDAC6-218ENST00000470942 IFIH1Q9BYX4 1025 aaKnown RBP17.71■□□□□ 0.43
HDAC6-218ENST00000470942 PRDM12Q9H4Q4 367 aa17.71■□□□□ 0.43
HDAC6-218ENST00000470942 SH2B1Q9NRF2 756 aaPredicted RBP17.71■□□□□ 0.43
HDAC6-218ENST00000470942 SMIM35A0A1B0GVV1 85 aa17.7■□□□□ 0.42
HDAC6-218ENST00000470942 FAM205CA6NFA0 338 aa17.7■□□□□ 0.42
HDAC6-218ENST00000470942 GCFC2P16383 781 aaKnown RBP17.7■□□□□ 0.42
HDAC6-218ENST00000470942 LPIN1Q14693 890 aa17.7■□□□□ 0.42
HDAC6-218ENST00000470942 RABEP1Q15276 862 aa17.7■□□□□ 0.42
HDAC6-218ENST00000470942 PPP4R3AQ6IN85 833 aa17.7■□□□□ 0.42
HDAC6-218ENST00000470942 DIS3L2Q8IYB7 885 aaKnown RBP17.7■□□□□ 0.42
HDAC6-218ENST00000470942 MYOCDQ8IZQ8 938 aa17.7■□□□□ 0.42
HDAC6-218ENST00000470942 NME8Q8N427 588 aa17.7■□□□□ 0.42
HDAC6-218ENST00000470942 FAM167AQ96KS9 214 aa17.7■□□□□ 0.42
HDAC6-218ENST00000470942 GAS2L1Q99501 681 aaPredicted RBP17.7■□□□□ 0.42
HDAC6-218ENST00000470942 LLPHQ9BRT6 129 aaKnown RBP17.7■□□□□ 0.42
HDAC6-218ENST00000470942 NRBP2Q9NSY0 501 aa17.7■□□□□ 0.42
HDAC6-218ENST00000470942 TRPV2Q9Y5S1 764 aa17.7■□□□□ 0.42
HDAC6-218ENST00000470942 COL6A3P12111 3177 aa17.7■□□□□ 0.42
HDAC6-218ENST00000470942 IGSF9BQ9UPX0 1349 aa17.7■□□□□ 0.42
HDAC6-218ENST00000470942 BTBD18B2RXH4 712 aa17.69■□□□□ 0.42
HDAC6-218ENST00000470942 GJB5O95377 273 aa17.69■□□□□ 0.42
HDAC6-218ENST00000470942 GUCY1B3Q02153 619 aa17.69■□□□□ 0.42
HDAC6-218ENST00000470942 FBXO47Q5MNV8 452 aa17.69■□□□□ 0.42
HDAC6-218ENST00000470942 RDM1Q8NG50 284 aa17.69■□□□□ 0.42
HDAC6-218ENST00000470942 CERS4Q9HA82 394 aa17.69■□□□□ 0.42
HDAC6-218ENST00000470942 CEP131Q9UPN4 1083 aa17.69■□□□□ 0.42
HDAC6-218ENST00000470942 ZBTB42B2RXF5 422 aa17.68■□□□□ 0.42
HDAC6-218ENST00000470942 ST18O60284 1047 aa17.68■□□□□ 0.42
HDAC6-218ENST00000470942 ZNF862O60290 1169 aa17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms