RNA–Protein interactions for RNA: ENST00000470463.1

SND1-208, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 4

Gene SND1, Length 530 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-208ENST00000470463 ZCCHC17Q9NP64 241 aaKnown RBP12.17□□□□□ -0.46
SND1-208ENST00000470463 MAPK8IP1Q9UQF2 711 aa12.17□□□□□ -0.46
SND1-208ENST00000470463 A0A1W2PQC6 194 aa12.16□□□□□ -0.46
SND1-208ENST00000470463 STRNO43815 780 aa12.16□□□□□ -0.46
SND1-208ENST00000470463 CALUO43852 315 aaPredicted RBP12.16□□□□□ -0.46
SND1-208ENST00000470463 ERCC3P19447 782 aa12.16□□□□□ -0.46
SND1-208ENST00000470463 RPL13P26373 211 aaKnown RBP12.16□□□□□ -0.46
SND1-208ENST00000470463 ZNF131P52739 623 aa12.16□□□□□ -0.46
SND1-208ENST00000470463 COPB1P53618 953 aaKnown RBP12.16□□□□□ -0.46
SND1-208ENST00000470463 PSMC6P62333 389 aa12.16□□□□□ -0.46
SND1-208ENST00000470463 ERVK-9P63128 1117 aa12.16□□□□□ -0.46
SND1-208ENST00000470463 ERVK-24P63145 666 aa12.16□□□□□ -0.46
SND1-208ENST00000470463 PPP2R3AQ06190 1150 aa12.16□□□□□ -0.46
SND1-208ENST00000470463 NEDD9Q14511 834 aa12.16□□□□□ -0.46
SND1-208ENST00000470463 KRT31Q15323 416 aa12.16□□□□□ -0.46
SND1-208ENST00000470463 BMT2Q1RMZ1 405 aa12.16□□□□□ -0.46
SND1-208ENST00000470463 ANKRD40Q6AI12 368 aa12.16□□□□□ -0.46
SND1-208ENST00000470463 CYP4F22Q6NT55 531 aa12.16□□□□□ -0.46
SND1-208ENST00000470463 MIS18BP1Q6P0N0 1132 aa12.16□□□□□ -0.46
SND1-208ENST00000470463 DLK2Q6UY11 383 aa12.16□□□□□ -0.46
SND1-208ENST00000470463 MOB2Q70IA6 237 aa12.16□□□□□ -0.46
SND1-208ENST00000470463 CNGA4Q8IV77 575 aa12.16□□□□□ -0.46
SND1-208ENST00000470463 FAM133AQ8N9E0 248 aa12.16□□□□□ -0.46
SND1-208ENST00000470463 RETREG2Q8NC44 543 aa12.16□□□□□ -0.46
SND1-208ENST00000470463 GPRC5AQ8NFJ5 357 aa12.16□□□□□ -0.46
SND1-208ENST00000470463 GOLGA5Q8TBA6 731 aa12.16□□□□□ -0.46
SND1-208ENST00000470463 SMCR8Q8TEV9 937 aaPredicted RBP12.16□□□□□ -0.46
SND1-208ENST00000470463 HHIPL1Q96JK4 782 aa12.16□□□□□ -0.46
SND1-208ENST00000470463 MMP19Q99542 508 aa12.16□□□□□ -0.46
SND1-208ENST00000470463 REEP2Q9BRK0 252 aa12.16□□□□□ -0.46
SND1-208ENST00000470463 NUP58Q9BVL2 599 aa12.16□□□□□ -0.46
SND1-208ENST00000470463 NAA15Q9BXJ9 866 aaKnown RBP12.16□□□□□ -0.46
SND1-208ENST00000470463 ZNF408Q9H9D4 720 aa12.16□□□□□ -0.46
SND1-208ENST00000470463 C17orf75Q9HAS0 396 aa12.16□□□□□ -0.46
SND1-208ENST00000470463 JPH1Q9HDC5 661 aaPredicted RBP12.16□□□□□ -0.46
SND1-208ENST00000470463 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.16□□□□□ -0.46
SND1-208ENST00000470463 LARSQ9P2J5 1176 aaKnown RBP12.16□□□□□ -0.46
SND1-208ENST00000470463 SLC9A2Q9UBY0 812 aa12.16□□□□□ -0.46
SND1-208ENST00000470463 PPME1Q9Y570 386 aa12.16□□□□□ -0.46
SND1-208ENST00000470463 PCDHB13Q9Y5F0 798 aa12.16□□□□□ -0.46
SND1-208ENST00000470463 PCDHA2Q9Y5H9 948 aa12.16□□□□□ -0.46
SND1-208ENST00000470463 TLL2Q9Y6L7 1015 aa12.16□□□□□ -0.46
SND1-208ENST00000470463 ASB14A6NK59 587 aa12.15□□□□□ -0.46
SND1-208ENST00000470463 LGALS16A8MUM7 142 aa12.15□□□□□ -0.46
SND1-208ENST00000470463 DDX39AO00148 427 aaKnown RBP12.15□□□□□ -0.46
SND1-208ENST00000470463 PDXKO00764 312 aa12.15□□□□□ -0.46
SND1-208ENST00000470463 CNMDO75829 334 aa12.15□□□□□ -0.46
SND1-208ENST00000470463 CELF2O95319 508 aaKnown RBP12.15□□□□□ -0.46
SND1-208ENST00000470463 KCNA2P16389 499 aa12.15□□□□□ -0.46
SND1-208ENST00000470463 KNOP1Q1ED39 458 aaKnown RBP12.15□□□□□ -0.46
SND1-208ENST00000470463 FKBP15Q5T1M5 1219 aa12.15□□□□□ -0.46
SND1-208ENST00000470463 APTXQ7Z2E3 356 aaKnown RBP12.15□□□□□ -0.46
SND1-208ENST00000470463 KIAA1524Q8TCG1 905 aa12.15□□□□□ -0.46
SND1-208ENST00000470463 PIGOQ8TEQ8 1089 aa12.15□□□□□ -0.46
SND1-208ENST00000470463 DRC1Q96MC2 740 aa12.15□□□□□ -0.46
SND1-208ENST00000470463 UIMC1Q96RL1 719 aa12.15□□□□□ -0.46
SND1-208ENST00000470463 PARK7Q99497 189 aaKnown RBP12.15□□□□□ -0.46
SND1-208ENST00000470463 DUSP9Q99956 384 aaKnown RBP12.15□□□□□ -0.46
SND1-208ENST00000470463 ZHX3Q9H4I2 956 aa12.15□□□□□ -0.46
SND1-208ENST00000470463 MRPL44Q9H9J2 332 aaKnown RBP12.15□□□□□ -0.46
SND1-208ENST00000470463 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.15□□□□□ -0.46
SND1-208ENST00000470463 CGNQ9P2M7 1197 aaKnown RBP12.15□□□□□ -0.46
SND1-208ENST00000470463 RBPJLQ9UBG7 517 aa12.15□□□□□ -0.46
SND1-208ENST00000470463 NRBP1Q9UHY1 535 aa12.15□□□□□ -0.46
SND1-208ENST00000470463 TRAF3IP3Q9Y228 551 aa12.15□□□□□ -0.46
SND1-208ENST00000470463 CCL15-CCL14A0A0B4J2E2 113 aa12.14□□□□□ -0.47
SND1-208ENST00000470463 TRIM49BA6NDI0 452 aa12.14□□□□□ -0.47
SND1-208ENST00000470463 PDHXO00330 501 aa12.14□□□□□ -0.47
SND1-208ENST00000470463 CETN3O15182 167 aa12.14□□□□□ -0.47
SND1-208ENST00000470463 TUBB4AP04350 444 aa12.14□□□□□ -0.47
SND1-208ENST00000470463 SKILP12757 684 aa12.14□□□□□ -0.47
SND1-208ENST00000470463 YWHABP31946 246 aaKnown RBP12.14□□□□□ -0.47
SND1-208ENST00000470463 PBX1P40424 430 aa12.14□□□□□ -0.47
SND1-208ENST00000470463 MTIF2P46199 727 aaKnown RBP12.14□□□□□ -0.47
SND1-208ENST00000470463 RARRES1P49788 294 aa12.14□□□□□ -0.47
SND1-208ENST00000470463 MARSP56192 900 aaKnown RBP12.14□□□□□ -0.47
SND1-208ENST00000470463 SNRPFP62306 86 aaKnown RBP12.14□□□□□ -0.47
SND1-208ENST00000470463 TBX2Q13207 712 aaPredicted RBP12.14□□□□□ -0.47
SND1-208ENST00000470463 NFIL3Q16649 462 aa12.14□□□□□ -0.47
SND1-208ENST00000470463 CCL15Q16663 113 aa12.14□□□□□ -0.47
SND1-208ENST00000470463 CCDC144BQ3MJ40 725 aa12.14□□□□□ -0.47
SND1-208ENST00000470463 ZCWPW2Q504Y3 356 aa12.14□□□□□ -0.47
SND1-208ENST00000470463 SPRYD7Q5W111 196 aa12.14□□□□□ -0.47
SND1-208ENST00000470463 CST9Q5W186 159 aa12.14□□□□□ -0.47
SND1-208ENST00000470463 PADI6Q6TGC4 694 aa12.14□□□□□ -0.47
SND1-208ENST00000470463 SFR1Q86XK3 245 aa12.14□□□□□ -0.47
SND1-208ENST00000470463 EXOC8Q8IYI6 725 aa12.14□□□□□ -0.47
SND1-208ENST00000470463 MYCT1Q8N699 235 aa12.14□□□□□ -0.47
SND1-208ENST00000470463 BANK1Q8NDB2 785 aa12.14□□□□□ -0.47
SND1-208ENST00000470463 ZNF507Q8TCN5 953 aa12.14□□□□□ -0.47
SND1-208ENST00000470463 CACTINQ8WUQ7 758 aaKnown RBP12.14□□□□□ -0.47
SND1-208ENST00000470463 MS4A4AQ96JQ5 239 aa12.14□□□□□ -0.47
SND1-208ENST00000470463 CNOT6LQ96LI5 555 aaKnown RBP12.14□□□□□ -0.47
SND1-208ENST00000470463 PANX2Q96RD6 677 aa12.14□□□□□ -0.47
SND1-208ENST00000470463 TUBGCP2Q9BSJ2 902 aa12.14□□□□□ -0.47
SND1-208ENST00000470463 RUSC1Q9BVN2 902 aa12.14□□□□□ -0.47
SND1-208ENST00000470463 SEMA6BQ9H3T3 888 aa12.14□□□□□ -0.47
SND1-208ENST00000470463 KCND1Q9NSA2 647 aa12.14□□□□□ -0.47
SND1-208ENST00000470463 TYW1Q9NV66 732 aaKnown RBP12.14□□□□□ -0.47
SND1-208ENST00000470463 MORF4L1Q9UBU8 362 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms