RNA–Protein interactions for RNA: ENST00000470170.1

COL11A1-208, Transcript of collagen type XI alpha 1 chain, humanhuman

TSL 2

Gene COL11A1, Length 785 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-208ENST00000470170 NOSTRINQ8IVI9 506 aa8.11□□□□□ -1.11
COL11A1-208ENST00000470170 IFNL2Q8IZJ0 200 aa8.11□□□□□ -1.11
COL11A1-208ENST00000470170 THAP3Q8WTV1 239 aaPredicted RBP8.11□□□□□ -1.11
COL11A1-208ENST00000470170 MAGEB10Q96LZ2 347 aaPredicted RBP8.11□□□□□ -1.11
COL11A1-208ENST00000470170 GNRHR2Q96P88 292 aa8.11□□□□□ -1.11
COL11A1-208ENST00000470170 INCENPQ9NQS7 918 aa8.11□□□□□ -1.11
COL11A1-208ENST00000470170 PTCH2Q9Y6C5 1203 aa8.11□□□□□ -1.11
COL11A1-208ENST00000470170 SCDO00767 359 aa8.1□□□□□ -1.11
COL11A1-208ENST00000470170 TNFRSF1AP19438 455 aa8.1□□□□□ -1.11
COL11A1-208ENST00000470170 POLD1P28340 1107 aa8.1□□□□□ -1.11
COL11A1-208ENST00000470170 IL13RA1P78552 427 aa8.1□□□□□ -1.11
COL11A1-208ENST00000470170 WDR72Q3MJ13 1102 aa8.1□□□□□ -1.11
COL11A1-208ENST00000470170 FGD2Q7Z6J4 655 aa8.1□□□□□ -1.11
COL11A1-208ENST00000470170 LRRC37BQ96QE4 947 aa8.1□□□□□ -1.11
COL11A1-208ENST00000470170 CARD11Q9BXL7 1154 aa8.1□□□□□ -1.11
COL11A1-208ENST00000470170 CELF4Q9BZC1 486 aaKnown RBP8.1□□□□□ -1.11
COL11A1-208ENST00000470170 PATE3B3GLJ2 98 aa8.09□□□□□ -1.11
COL11A1-208ENST00000470170 C1QTNF3-AMACRE9PGA6 284 aa8.09□□□□□ -1.11
COL11A1-208ENST00000470170 MATN3O15232 486 aa8.09□□□□□ -1.11
COL11A1-208ENST00000470170 MMEP08473 750 aa8.09□□□□□ -1.11
COL11A1-208ENST00000470170 ADCY8P40145 1251 aa8.09□□□□□ -1.11
COL11A1-208ENST00000470170 RRADP55042 308 aa8.09□□□□□ -1.11
COL11A1-208ENST00000470170 CDSNQ15517 529 aa8.09□□□□□ -1.11
COL11A1-208ENST00000470170 C2orf27AQ580R0 203 aa8.09□□□□□ -1.11
COL11A1-208ENST00000470170 ABHD17CQ6PCB6 329 aa8.09□□□□□ -1.11
COL11A1-208ENST00000470170 LILRB2Q8N423 598 aa8.09□□□□□ -1.11
COL11A1-208ENST00000470170 WWC2-AS2Q96NR7 200 aa8.09□□□□□ -1.11
COL11A1-208ENST00000470170 LMF1Q96S06 567 aa8.09□□□□□ -1.11
COL11A1-208ENST00000470170 KLC2Q9H0B6 622 aa8.09□□□□□ -1.11
COL11A1-208ENST00000470170 SEC61A2Q9H9S3 476 aa8.09□□□□□ -1.11
COL11A1-208ENST00000470170 GALNT8Q9NY28 637 aa8.09□□□□□ -1.11
COL11A1-208ENST00000470170 CUTAO60888 179 aa8.08□□□□□ -1.12
COL11A1-208ENST00000470170 MPIG6BO95866 241 aa8.08□□□□□ -1.12
COL11A1-208ENST00000470170 APPP05067 770 aa8.08□□□□□ -1.12
COL11A1-208ENST00000470170 HERVK_113P62684 666 aa8.08□□□□□ -1.12
COL11A1-208ENST00000470170 LRSAM1Q6UWE0 723 aa8.08□□□□□ -1.12
COL11A1-208ENST00000470170 OVCH1Q7RTY7 1134 aa8.08□□□□□ -1.12
COL11A1-208ENST00000470170 PALM2Q8IXS6 379 aa8.08□□□□□ -1.12
COL11A1-208ENST00000470170 MRPL4Q9BYD3 311 aaKnown RBP8.08□□□□□ -1.12
COL11A1-208ENST00000470170 OSBPL2Q9H1P3 480 aa8.08□□□□□ -1.12
COL11A1-208ENST00000470170 DEF6Q9H4E7 631 aa8.08□□□□□ -1.12
COL11A1-208ENST00000470170 UCKL1Q9NWZ5 548 aa8.08□□□□□ -1.12
COL11A1-208ENST00000470170 TCRBV16S1A1N1A0A5B0 115 aa8.07□□□□□ -1.12
COL11A1-208ENST00000470170 KCNA6P17658 529 aa8.07□□□□□ -1.12
COL11A1-208ENST00000470170 ZNF568Q3ZCX4 644 aa8.07□□□□□ -1.12
COL11A1-208ENST00000470170 Q8TCH9 128 aa8.07□□□□□ -1.12
COL11A1-208ENST00000470170 SH3RF3Q8TEJ3 882 aaPredicted RBP8.07□□□□□ -1.12
COL11A1-208ENST00000470170 AMNQ9BXJ7 453 aa8.07□□□□□ -1.12
COL11A1-208ENST00000470170 NCOA5Q9HCD5 579 aaKnown RBP8.07□□□□□ -1.12
COL11A1-208ENST00000470170 TRIM39Q9HCM9 518 aa8.07□□□□□ -1.12
COL11A1-208ENST00000470170 TSC22D4Q9Y3Q8 395 aa8.07□□□□□ -1.12
COL11A1-208ENST00000470170 CCDC163A0A0D9SF12 145 aa8.06□□□□□ -1.12
COL11A1-208ENST00000470170 ZNF623O75123 536 aa8.06□□□□□ -1.12
COL11A1-208ENST00000470170 ETV4P43268 484 aa8.06□□□□□ -1.12
COL11A1-208ENST00000470170 KCNQ1P51787 676 aa8.06□□□□□ -1.12
COL11A1-208ENST00000470170 NOLC1Q14978 699 aaKnown RBP eCLIP8.06□□□□□ -1.12
COL11A1-208ENST00000470170 RNF151Q2KHN1 245 aa8.06□□□□□ -1.12
COL11A1-208ENST00000470170 TCTN3Q6NUS6 607 aa8.06□□□□□ -1.12
COL11A1-208ENST00000470170 SPRED1Q7Z699 444 aa8.06□□□□□ -1.12
COL11A1-208ENST00000470170 IGSF22Q8N9C0 903 aa8.06□□□□□ -1.12
COL11A1-208ENST00000470170 ASB15Q8WXK1 588 aa8.06□□□□□ -1.12
COL11A1-208ENST00000470170 NEIL1Q96FI4 390 aaPredicted RBP8.06□□□□□ -1.12
COL11A1-208ENST00000470170 TMPRSS5Q9H3S3 457 aa8.06□□□□□ -1.12
COL11A1-208ENST00000470170 KCNH7Q9NS40 1196 aa8.06□□□□□ -1.12
COL11A1-208ENST00000470170 RASSF10A6NK89 507 aa8.05□□□□□ -1.12
COL11A1-208ENST00000470170 KCNQ2O43526 872 aa8.05□□□□□ -1.12
COL11A1-208ENST00000470170 FOXS1O43638 330 aa8.05□□□□□ -1.12
COL11A1-208ENST00000470170 SELENOPP49908 381 aa8.05□□□□□ -1.12
COL11A1-208ENST00000470170 BMS1Q14692 1282 aaKnown RBP8.05□□□□□ -1.12
COL11A1-208ENST00000470170 STILQ15468 1287 aa8.05□□□□□ -1.12
COL11A1-208ENST00000470170 GIMAP8Q8ND71 665 aaPredicted RBP8.05□□□□□ -1.12
COL11A1-208ENST00000470170 WNK4Q96J92 1243 aa8.05□□□□□ -1.12
COL11A1-208ENST00000470170 BTBD2Q9BX70 525 aa8.05□□□□□ -1.12
COL11A1-208ENST00000470170 ZDHHC5Q9C0B5 715 aa8.05□□□□□ -1.12
COL11A1-208ENST00000470170 KIAA1683Q9H0B3 1180 aa8.05□□□□□ -1.12
COL11A1-208ENST00000470170 CDC42EP3Q9UKI2 254 aa8.05□□□□□ -1.12
COL11A1-208ENST00000470170 CDK11AQ9UQ88 783 aaPredicted RBP8.05□□□□□ -1.12
COL11A1-208ENST00000470170 TCAF1Q9Y4C2 921 aa8.05□□□□□ -1.12
COL11A1-208ENST00000470170 SLC12A8A0AV02 714 aa8.04□□□□□ -1.12
COL11A1-208ENST00000470170 HMGCRP04035 888 aa8.04□□□□□ -1.12
COL11A1-208ENST00000470170 ECE1P42892 770 aa8.04□□□□□ -1.12
COL11A1-208ENST00000470170 RAC3P60763 192 aa8.04□□□□□ -1.12
COL11A1-208ENST00000470170 CD83Q01151 205 aa8.04□□□□□ -1.12
COL11A1-208ENST00000470170 TMEM132BQ14DG7 1078 aa8.04□□□□□ -1.12
COL11A1-208ENST00000470170 TMEM177Q53S58 311 aa8.04□□□□□ -1.12
COL11A1-208ENST00000470170 CXXC5Q7LFL8 322 aaKnown RBP8.04□□□□□ -1.12
COL11A1-208ENST00000470170 OTOP2Q7RTS6 562 aa8.04□□□□□ -1.12
COL11A1-208ENST00000470170 TAX1BP1Q86VP1 789 aa8.04□□□□□ -1.12
COL11A1-208ENST00000470170 SREK1Q8WXA9 508 aaKnown RBP8.04□□□□□ -1.12
COL11A1-208ENST00000470170 GBP4Q96PP9 640 aa8.04□□□□□ -1.12
COL11A1-208ENST00000470170 B3GALT1Q9Y5Z6 326 aa8.04□□□□□ -1.12
COL11A1-208ENST00000470170 PRAMEF22A3QJZ6 481 aa8.03□□□□□ -1.12
COL11A1-208ENST00000470170 FOXP2O15409 715 aa8.03□□□□□ -1.12
COL11A1-208ENST00000470170 RAPGEF3O95398 923 aa8.03□□□□□ -1.12
COL11A1-208ENST00000470170 ZXDAP98168 799 aa8.03□□□□□ -1.12
COL11A1-208ENST00000470170 R3HDM1Q15032 1099 aaKnown RBP8.03□□□□□ -1.12
COL11A1-208ENST00000470170 ZMAT1Q5H9K5 638 aa8.03□□□□□ -1.12
COL11A1-208ENST00000470170 KANK2Q63ZY3 851 aa8.03□□□□□ -1.12
COL11A1-208ENST00000470170 LARP4Q71RC2 724 aaKnown RBP eCLIP8.03□□□□□ -1.12
COL11A1-208ENST00000470170 C2orf69Q8N8R5 385 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms