RNA–Protein interactions for RNA: ENST00000470083.5

LSM2-209, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM2, Length 641 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-209ENST00000470083 CASP10Q92851 521 aa13.9□□□□□ -0.18
LSM2-209ENST00000470083 ZKSCAN3Q9BRR0 538 aa13.9□□□□□ -0.18
LSM2-209ENST00000470083 DCTPP1Q9H773 170 aa13.9□□□□□ -0.18
LSM2-209ENST00000470083 KAT14Q9H8E8 782 aa13.9□□□□□ -0.18
LSM2-209ENST00000470083 PADI3Q9ULW8 664 aa13.9□□□□□ -0.18
LSM2-209ENST00000470083 TELO2Q9Y4R8 837 aa13.9□□□□□ -0.18
LSM2-209ENST00000470083 PCDHA1Q9Y5I3 950 aa13.9□□□□□ -0.18
LSM2-209ENST00000470083 OTOGLQ3ZCN5 2332 aa13.9□□□□□ -0.18
LSM2-209ENST00000470083 GCOM1H8Y6P7 765 aaPredicted RBP13.89□□□□□ -0.19
LSM2-209ENST00000470083 PI15O43692 258 aa13.89□□□□□ -0.19
LSM2-209ENST00000470083 PPP1R11O60927 126 aaPredicted RBP13.89□□□□□ -0.19
LSM2-209ENST00000470083 POLR2MP0CAP2 368 aa13.89□□□□□ -0.19
LSM2-209ENST00000470083 SARSP49591 514 aaKnown RBP13.89□□□□□ -0.19
LSM2-209ENST00000470083 NT5C2P49902 561 aa13.89□□□□□ -0.19
LSM2-209ENST00000470083 MRPS9P82933 396 aaKnown RBP13.89□□□□□ -0.19
LSM2-209ENST00000470083 PAK2Q13177 524 aa13.89□□□□□ -0.19
LSM2-209ENST00000470083 CCDC178Q5BJE1 867 aa13.89□□□□□ -0.19
LSM2-209ENST00000470083 MARCH8Q5T0T0 291 aa13.89□□□□□ -0.19
LSM2-209ENST00000470083 IER5Q5VY09 327 aa13.89□□□□□ -0.19
LSM2-209ENST00000470083 TDRD5Q8NAT2 981 aaKnown RBP13.89□□□□□ -0.19
LSM2-209ENST00000470083 COLGALT1Q8NBJ5 622 aa13.89□□□□□ -0.19
LSM2-209ENST00000470083 MTMR8Q96EF0 704 aa13.89□□□□□ -0.19
LSM2-209ENST00000470083 TCF25Q9BQ70 676 aa13.89□□□□□ -0.19
LSM2-209ENST00000470083 SENP7Q9BQF6 1050 aa13.89□□□□□ -0.19
LSM2-209ENST00000470083 RTP3Q9BQQ7 232 aa13.89□□□□□ -0.19
LSM2-209ENST00000470083 RNF41Q9H4P4 317 aaPredicted RBP13.89□□□□□ -0.19
LSM2-209ENST00000470083 NGRNQ9NPE2 291 aaKnown RBP13.89□□□□□ -0.19
LSM2-209ENST00000470083 HELLSQ9NRZ9 838 aa13.89□□□□□ -0.19
LSM2-209ENST00000470083 LIMD1Q9UGP4 676 aa13.89□□□□□ -0.19
LSM2-209ENST00000470083 SPTBN2O15020 2390 aa13.89□□□□□ -0.19
LSM2-209ENST00000470083 FRMPD4Q14CM0 1322 aa13.89□□□□□ -0.19
LSM2-209ENST00000470083 IGSF9BQ9UPX0 1349 aa13.89□□□□□ -0.19
LSM2-209ENST00000470083 KIAA1671Q9BY89 1806 aa13.88□□□□□ -0.19
LSM2-209ENST00000470083 TBKBP1A7MCY6 615 aa13.88□□□□□ -0.19
LSM2-209ENST00000470083 HIDE1A8MVS5 230 aa13.88□□□□□ -0.19
LSM2-209ENST00000470083 TRIM6-TRIM34B2RNG4 842 aa13.88□□□□□ -0.19
LSM2-209ENST00000470083 NPR3P17342 541 aa13.88□□□□□ -0.19
LSM2-209ENST00000470083 MTHFRP42898 656 aa13.88□□□□□ -0.19
LSM2-209ENST00000470083 PLCB3Q01970 1234 aa13.88□□□□□ -0.19
LSM2-209ENST00000470083 SP4Q02446 784 aa13.88□□□□□ -0.19
LSM2-209ENST00000470083 APOBRQ0VD83 1088 aa13.88□□□□□ -0.19
LSM2-209ENST00000470083 FAM43BQ6ZT52 329 aaPredicted RBP13.88□□□□□ -0.19
LSM2-209ENST00000470083 FCHSD1Q86WN1 690 aa13.88□□□□□ -0.19
LSM2-209ENST00000470083 IQCA1Q86XH1 822 aa13.88□□□□□ -0.19
LSM2-209ENST00000470083 PLCD3Q8N3E9 789 aa13.88□□□□□ -0.19
LSM2-209ENST00000470083 MRPS27Q92552 414 aaKnown RBP13.88□□□□□ -0.19
LSM2-209ENST00000470083 TMX1Q9H3N1 280 aa13.88□□□□□ -0.19
LSM2-209ENST00000470083 ENTPD7Q9NQZ7 604 aa13.88□□□□□ -0.19
LSM2-209ENST00000470083 ERAP1Q9NZ08 941 aa13.88□□□□□ -0.19
LSM2-209ENST00000470083 PUF60Q9UHX1 559 aaKnown RBP13.88□□□□□ -0.19
LSM2-209ENST00000470083 USTQ9Y2C2 406 aa13.88□□□□□ -0.19
LSM2-209ENST00000470083 PCDHB7Q9Y5E2 793 aa13.88□□□□□ -0.19
LSM2-209ENST00000470083 TRPV2Q9Y5S1 764 aa13.88□□□□□ -0.19
LSM2-209ENST00000470083 CHD8Q9HCK8 2581 aa13.88□□□□□ -0.19
LSM2-209ENST00000470083 NEDD4P46934 1319 aa13.88□□□□□ -0.19
LSM2-209ENST00000470083 M0QZ92 97 aa13.87□□□□□ -0.19
LSM2-209ENST00000470083 ZBTB5O15062 677 aa13.87□□□□□ -0.19
LSM2-209ENST00000470083 LAG3P18627 525 aa13.87□□□□□ -0.19
LSM2-209ENST00000470083 TCF7P36402 384 aaPredicted RBP13.87□□□□□ -0.19
LSM2-209ENST00000470083 CYP2W1Q8TAV3 490 aa13.87□□□□□ -0.19
LSM2-209ENST00000470083 FAM49AQ9H0Q0 323 aaPredicted RBP13.87□□□□□ -0.19
LSM2-209ENST00000470083 TYW1Q9NV66 732 aaKnown RBP13.87□□□□□ -0.19
LSM2-209ENST00000470083 HCSTQ9UBK5 93 aa13.87□□□□□ -0.19
LSM2-209ENST00000470083 HCFC2Q9Y5Z7 792 aa13.87□□□□□ -0.19
LSM2-209ENST00000470083 GPR179Q6PRD1 2367 aa13.87□□□□□ -0.19
LSM2-209ENST00000470083 PLXNA4Q9HCM2 1894 aa13.87□□□□□ -0.19
LSM2-209ENST00000470083 CHD6Q8TD26 2715 aa13.86□□□□□ -0.19
LSM2-209ENST00000470083 ARP10275 920 aa13.86□□□□□ -0.19
LSM2-209ENST00000470083 MARK3P27448 753 aa13.86□□□□□ -0.19
LSM2-209ENST00000470083 ENAHQ8N8S7 591 aaPredicted RBP13.86□□□□□ -0.19
LSM2-209ENST00000470083 GIMAP8Q8ND71 665 aaPredicted RBP13.86□□□□□ -0.19
LSM2-209ENST00000470083 OTUD7AQ8TE49 926 aaPredicted RBP13.86□□□□□ -0.19
LSM2-209ENST00000470083 A0A0D9SFI3 127 aa13.85□□□□□ -0.19
LSM2-209ENST00000470083 RRN3P2A6NIE6 340 aa13.85□□□□□ -0.19
LSM2-209ENST00000470083 IBSPP21815 317 aaPredicted RBP13.85□□□□□ -0.19
LSM2-209ENST00000470083 IGBP1P78318 339 aa13.85□□□□□ -0.19
LSM2-209ENST00000470083 TRAF1Q13077 416 aa13.85□□□□□ -0.19
LSM2-209ENST00000470083 MCMDC2Q4G0Z9 681 aa13.85□□□□□ -0.19
LSM2-209ENST00000470083 FAM102BQ5T8I3 360 aa13.85□□□□□ -0.19
LSM2-209ENST00000470083 KIAA1841Q6NSI8 718 aa13.85□□□□□ -0.19
LSM2-209ENST00000470083 STAG2Q8N3U4 1231 aa13.85□□□□□ -0.19
LSM2-209ENST00000470083 RUBCNQ92622 972 aa13.85□□□□□ -0.19
LSM2-209ENST00000470083 ZBTB10Q96DT7 871 aa13.85□□□□□ -0.19
LSM2-209ENST00000470083 FAM227BQ96M60 508 aa13.85□□□□□ -0.19
LSM2-209ENST00000470083 ZSCAN10Q96SZ4 725 aaPredicted RBP13.85□□□□□ -0.19
LSM2-209ENST00000470083 HINFPQ9BQA5 517 aa13.85□□□□□ -0.19
LSM2-209ENST00000470083 CELF4Q9BZC1 486 aaKnown RBP13.85□□□□□ -0.19
LSM2-209ENST00000470083 CWH43Q9H720 699 aa13.85□□□□□ -0.19
LSM2-209ENST00000470083 ERVK-5Q9HDB9 667 aa13.85□□□□□ -0.19
LSM2-209ENST00000470083 C1orf112Q9NSG2 853 aa13.85□□□□□ -0.19
LSM2-209ENST00000470083 RTEL1Q9NZ71 1219 aa13.85□□□□□ -0.19
LSM2-209ENST00000470083 R4GN57 208 aa13.85□□□□□ -0.19
LSM2-209ENST00000470083 KDM3AQ9Y4C1 1321 aa13.85□□□□□ -0.19
LSM2-209ENST00000470083 MYO10Q9HD67 2058 aa13.84□□□□□ -0.19
LSM2-209ENST00000470083 KLRF2D3W0D1 207 aa13.84□□□□□ -0.19
LSM2-209ENST00000470083 MGEA5O60502 916 aa13.84□□□□□ -0.19
LSM2-209ENST00000470083 EOMESO95936 686 aa13.84□□□□□ -0.19
LSM2-209ENST00000470083 WEE2P0C1S8 567 aa13.84□□□□□ -0.19
LSM2-209ENST00000470083 MX1P20591 662 aa13.84□□□□□ -0.19
LSM2-209ENST00000470083 PPM1AP35813 382 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms