RNA–Protein interactions for RNA: ENST00000470068.2

CCDC144A-212, Transcript of coiled-coil domain containing 144A, humanhuman

TSL 1 (best)

Gene CCDC144A, Length 5,142 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144A-212ENST00000470068 ZNF135P52742 658 aaPredicted RBP6.61□□□□□ -1.35
CCDC144A-212ENST00000470068 ZYXQ15942 572 aaKnown RBP6.61□□□□□ -1.35
CCDC144A-212ENST00000470068 EXOC3L4Q17RC7 722 aa6.61□□□□□ -1.35
CCDC144A-212ENST00000470068 PRUNE1Q86TP1 453 aa6.61□□□□□ -1.35
CCDC144A-212ENST00000470068 IFNL3Q8IZI9 196 aa6.61□□□□□ -1.35
CCDC144A-212ENST00000470068 ARRDC4Q8NCT1 418 aa6.61□□□□□ -1.35
CCDC144A-212ENST00000470068 STAMBPL1Q96FJ0 436 aa6.61□□□□□ -1.35
CCDC144A-212ENST00000470068 VPS39Q96JC1 886 aa6.61□□□□□ -1.35
CCDC144A-212ENST00000470068 MAML3Q96JK9 1138 aa6.61□□□□□ -1.35
CCDC144A-212ENST00000470068 PSTPIP2Q9H939 334 aa6.61□□□□□ -1.35
CCDC144A-212ENST00000470068 SPTLC3Q9NUV7 552 aa6.61□□□□□ -1.35
CCDC144A-212ENST00000470068 APOBEC2Q9Y235 224 aaKnown RBP6.61□□□□□ -1.35
CCDC144A-212ENST00000470068 ARHGAP10A1A4S6 786 aa6.61□□□□□ -1.35
CCDC144A-212ENST00000470068 CCDC78A2IDD5 438 aa6.61□□□□□ -1.35
CCDC144A-212ENST00000470068 KRIT1O00522 736 aa6.61□□□□□ -1.35
CCDC144A-212ENST00000470068 PHKG2P15735 406 aa6.61□□□□□ -1.35
CCDC144A-212ENST00000470068 CYP2B6P20813 491 aa6.61□□□□□ -1.35
CCDC144A-212ENST00000470068 KRR1Q13601 381 aaKnown RBP6.61□□□□□ -1.35
CCDC144A-212ENST00000470068 MYBPC2Q14324 1141 aa6.61□□□□□ -1.35
CCDC144A-212ENST00000470068 EIF1ADQ8N9N8 165 aaKnown RBP6.61□□□□□ -1.35
CCDC144A-212ENST00000470068 FAM227BQ96M60 508 aa6.61□□□□□ -1.35
CCDC144A-212ENST00000470068 NDEL1Q9GZM8 345 aa6.61□□□□□ -1.35
CCDC144A-212ENST00000470068 COA1Q9GZY4 146 aa6.61□□□□□ -1.35
CCDC144A-212ENST00000470068 ZNF215Q9UL58 517 aaPredicted RBP6.61□□□□□ -1.35
CCDC144A-212ENST00000470068 SMCO2A6NFE2 343 aa6.61□□□□□ -1.35
CCDC144A-212ENST00000470068 MAPK13O15264 365 aa6.61□□□□□ -1.35
CCDC144A-212ENST00000470068 MAFGO15525 162 aa6.61□□□□□ -1.35
CCDC144A-212ENST00000470068 KRT37O76014 449 aa6.61□□□□□ -1.35
CCDC144A-212ENST00000470068 TMCC1O94876 653 aa6.61□□□□□ -1.35
CCDC144A-212ENST00000470068 PDE8BO95263 885 aa6.61□□□□□ -1.35
CCDC144A-212ENST00000470068 TTLL1O95922 423 aa6.61□□□□□ -1.35
CCDC144A-212ENST00000470068 PFKFB1P16118 471 aa6.61□□□□□ -1.35
CCDC144A-212ENST00000470068 PAPOLAP51003 745 aaKnown RBP6.61□□□□□ -1.35
CCDC144A-212ENST00000470068 ATXN3P54252 364 aaPredicted RBP6.61□□□□□ -1.35
CCDC144A-212ENST00000470068 RPS6KA2Q15349 733 aa6.61□□□□□ -1.35
CCDC144A-212ENST00000470068 SPDYCQ5MJ68 293 aa6.61□□□□□ -1.35
CCDC144A-212ENST00000470068 FAM178BQ8IXR5 827 aa6.61□□□□□ -1.35
CCDC144A-212ENST00000470068 IFT81Q8WYA0 676 aa6.61□□□□□ -1.35
CCDC144A-212ENST00000470068 CENPKQ9BS16 269 aa6.61□□□□□ -1.35
CCDC144A-212ENST00000470068 HMX1Q9NP08 348 aaPredicted RBP6.61□□□□□ -1.35
CCDC144A-212ENST00000470068 USP40Q9NVE5 1235 aa6.61□□□□□ -1.35
CCDC144A-212ENST00000470068 PANK4Q9NVE7 773 aa6.61□□□□□ -1.35
CCDC144A-212ENST00000470068 CEP72Q9P209 647 aa6.61□□□□□ -1.35
CCDC144A-212ENST00000470068 ASAP1Q9ULH1 1129 aa6.61□□□□□ -1.35
CCDC144A-212ENST00000470068 V9GY48 417 aaPredicted RBP6.61□□□□□ -1.35
CCDC144A-212ENST00000470068 A6NJR5 290 aa6.61□□□□□ -1.35
CCDC144A-212ENST00000470068 ECEL1O95672 775 aa6.61□□□□□ -1.35
CCDC144A-212ENST00000470068 MARCKSP29966 332 aaPredicted RBP6.61□□□□□ -1.35
CCDC144A-212ENST00000470068 CCND2P30279 289 aa6.61□□□□□ -1.35
CCDC144A-212ENST00000470068 HSPA13P48723 471 aa6.61□□□□□ -1.35
CCDC144A-212ENST00000470068 PSMD7P51665 324 aa6.61□□□□□ -1.35
CCDC144A-212ENST00000470068 KRT76Q01546 638 aa6.61□□□□□ -1.35
CCDC144A-212ENST00000470068 BFSP1Q12934 665 aa6.61□□□□□ -1.35
CCDC144A-212ENST00000470068 RC3H1Q5TC82 1133 aaKnown RBP6.61□□□□□ -1.35
CCDC144A-212ENST00000470068 ANGEL2Q5VTE6 544 aaKnown RBP6.61□□□□□ -1.35
CCDC144A-212ENST00000470068 NCAPG2Q86XI2 1143 aa6.61□□□□□ -1.35
CCDC144A-212ENST00000470068 ZNF677Q86XU0 584 aa6.61□□□□□ -1.35
CCDC144A-212ENST00000470068 CCNJLQ8IV13 435 aa6.61□□□□□ -1.35
CCDC144A-212ENST00000470068 NECAB1Q8N987 351 aa6.61□□□□□ -1.35
CCDC144A-212ENST00000470068 LZICQ8WZA0 190 aa6.61□□□□□ -1.35
CCDC144A-212ENST00000470068 RNPC3Q96LT9 517 aaKnown RBP6.61□□□□□ -1.35
CCDC144A-212ENST00000470068 LRGUKQ96M69 825 aa6.61□□□□□ -1.35
CCDC144A-212ENST00000470068 TRIM6Q9C030 488 aaPredicted RBP6.61□□□□□ -1.35
CCDC144A-212ENST00000470068 KDM1AO60341 852 aa6.6□□□□□ -1.35
CCDC144A-212ENST00000470068 H2AFYO75367 372 aaKnown RBP6.6□□□□□ -1.35
CCDC144A-212ENST00000470068 KRT38O76015 456 aa6.6□□□□□ -1.35
CCDC144A-212ENST00000470068 CETPP11597 493 aa6.6□□□□□ -1.35
CCDC144A-212ENST00000470068 RLBP1P12271 317 aa6.6□□□□□ -1.35
CCDC144A-212ENST00000470068 LIG4P49917 911 aa6.6□□□□□ -1.35
CCDC144A-212ENST00000470068 USP11P51784 963 aa6.6□□□□□ -1.35
CCDC144A-212ENST00000470068 CLNS1AP54105 237 aaKnown RBP6.6□□□□□ -1.35
CCDC144A-212ENST00000470068 HAND2P61296 217 aa6.6□□□□□ -1.35
CCDC144A-212ENST00000470068 SFSWAPQ12872 951 aaKnown RBP6.6□□□□□ -1.35
CCDC144A-212ENST00000470068 PDIA5Q14554 519 aa6.6□□□□□ -1.35
CCDC144A-212ENST00000470068 KCTD2Q14681 263 aa6.6□□□□□ -1.35
CCDC144A-212ENST00000470068 ZSCAN26Q16670 478 aa6.6□□□□□ -1.35
CCDC144A-212ENST00000470068 CARD14Q9BXL6 1004 aa6.6□□□□□ -1.35
CCDC144A-212ENST00000470068 CCDC22O60826 627 aa6.6□□□□□ -1.35
CCDC144A-212ENST00000470068 DNAJB2P25686 324 aa6.6□□□□□ -1.35
CCDC144A-212ENST00000470068 CHRNA3P32297 505 aa6.6□□□□□ -1.35
CCDC144A-212ENST00000470068 ABCE1P61221 599 aaKnown RBP6.6□□□□□ -1.35
CCDC144A-212ENST00000470068 TCP10Q12799 353 aa6.6□□□□□ -1.35
CCDC144A-212ENST00000470068 KRT81Q14533 505 aa6.6□□□□□ -1.35
CCDC144A-212ENST00000470068 FBXO46Q6PJ61 603 aaPredicted RBP6.6□□□□□ -1.35
CCDC144A-212ENST00000470068 PIK3AP1Q6ZUJ8 805 aa6.6□□□□□ -1.35
CCDC144A-212ENST00000470068 VSTM4Q8IW00 320 aa6.6□□□□□ -1.35
CCDC144A-212ENST00000470068 STAG1Q8WVM7 1258 aa6.6□□□□□ -1.35
CCDC144A-212ENST00000470068 LARP4BQ92615 738 aaKnown RBP6.6□□□□□ -1.35
CCDC144A-212ENST00000470068 ROPN1BQ9BZX4 212 aaPredicted RBP6.6□□□□□ -1.35
CCDC144A-212ENST00000470068 ROPN1Q9HAT0 212 aaPredicted RBP6.6□□□□□ -1.35
CCDC144A-212ENST00000470068 VAT1LQ9HCJ6 419 aa6.6□□□□□ -1.35
CCDC144A-212ENST00000470068 EIF2AK3Q9NZJ5 1116 aaKnown RBP6.6□□□□□ -1.35
CCDC144A-212ENST00000470068 METP08581 1390 aa6.6□□□□□ -1.35
CCDC144A-212ENST00000470068 TNS3Q68CZ2 1445 aa6.6□□□□□ -1.35
CCDC144A-212ENST00000470068 TULP4Q9NRJ4 1543 aa6.6□□□□□ -1.35
CCDC144A-212ENST00000470068 MCF2LO15068 1137 aa6.6□□□□□ -1.35
CCDC144A-212ENST00000470068 TJP3O95049 919 aa6.6□□□□□ -1.35
CCDC144A-212ENST00000470068 PSAPP07602 524 aa6.6□□□□□ -1.35
CCDC144A-212ENST00000470068 PDE6AP16499 860 aa6.6□□□□□ -1.35
CCDC144A-212ENST00000470068 SERPINB9P50453 376 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms