RNA–Protein interactions for RNA: ENST00000469757.1

TRAPPC3-206, Transcript of trafficking protein particle complex 3, humanhuman

TSL 2

Gene TRAPPC3, Length 221 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-206ENST00000469757 TMEM199Q8N511 208 aa9.34□□□□□ -0.91
TRAPPC3-206ENST00000469757 LINC01465Q8N7H1 131 aa9.34□□□□□ -0.91
TRAPPC3-206ENST00000469757 C4orf32Q8N8J7 132 aa9.34□□□□□ -0.91
TRAPPC3-206ENST00000469757 NEK9Q8TD19 979 aa9.34□□□□□ -0.91
TRAPPC3-206ENST00000469757 PPP1R12CQ9BZL4 782 aa9.34□□□□□ -0.91
TRAPPC3-206ENST00000469757 TMEM60Q9H2L4 133 aa9.34□□□□□ -0.91
TRAPPC3-206ENST00000469757 IL23AQ9NPF7 189 aa9.34□□□□□ -0.91
TRAPPC3-206ENST00000469757 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.34□□□□□ -0.91
TRAPPC3-206ENST00000469757 SETD4Q9NVD3 440 aa9.34□□□□□ -0.91
TRAPPC3-206ENST00000469757 PCDH10Q9P2E7 1040 aa9.34□□□□□ -0.91
TRAPPC3-206ENST00000469757 TRPC6Q9Y210 931 aa9.34□□□□□ -0.91
TRAPPC3-206ENST00000469757 SCN5AQ14524 2016 aa9.34□□□□□ -0.91
TRAPPC3-206ENST00000469757 TRIP12Q14669 1992 aaPredicted RBP9.33□□□□□ -0.92
TRAPPC3-206ENST00000469757 KDM3AQ9Y4C1 1321 aa9.33□□□□□ -0.92
TRAPPC3-206ENST00000469757 LOXHD1Q8IVV2 1947 aa9.33□□□□□ -0.92
TRAPPC3-206ENST00000469757 H3BQV1 296 aa9.33□□□□□ -0.92
TRAPPC3-206ENST00000469757 CHMP2AO43633 222 aa9.33□□□□□ -0.92
TRAPPC3-206ENST00000469757 BAG4O95429 457 aaKnown RBP9.33□□□□□ -0.92
TRAPPC3-206ENST00000469757 C22orf31O95567 290 aa9.33□□□□□ -0.92
TRAPPC3-206ENST00000469757 IQCF3P0C7M6 154 aa9.33□□□□□ -0.92
TRAPPC3-206ENST00000469757 CKBP12277 381 aa9.33□□□□□ -0.92
TRAPPC3-206ENST00000469757 PDIA4P13667 645 aaKnown RBP9.33□□□□□ -0.92
TRAPPC3-206ENST00000469757 SYT1P21579 422 aa9.33□□□□□ -0.92
TRAPPC3-206ENST00000469757 MCM7P33993 719 aa9.33□□□□□ -0.92
TRAPPC3-206ENST00000469757 FXR2P51116 673 aaKnown RBP eCLIP9.33□□□□□ -0.92
TRAPPC3-206ENST00000469757 PSMC5P62195 406 aa9.33□□□□□ -0.92
TRAPPC3-206ENST00000469757 ATP2C1P98194 919 aaPredicted RBP9.33□□□□□ -0.92
TRAPPC3-206ENST00000469757 MGAT3Q09327 533 aa9.33□□□□□ -0.92
TRAPPC3-206ENST00000469757 MKRN4PQ13434 485 aaPredicted RBP9.33□□□□□ -0.92
TRAPPC3-206ENST00000469757 GNL2Q13823 731 aaKnown RBP9.33□□□□□ -0.92
TRAPPC3-206ENST00000469757 MBTPS1Q14703 1052 aa9.33□□□□□ -0.92
TRAPPC3-206ENST00000469757 GPNMBQ14956 572 aa9.33□□□□□ -0.92
TRAPPC3-206ENST00000469757 EPHA7Q15375 998 aa9.33□□□□□ -0.92
TRAPPC3-206ENST00000469757 TARBP2Q15633 366 aaKnown RBP9.33□□□□□ -0.92
TRAPPC3-206ENST00000469757 LRIT3Q3SXY7 679 aa9.33□□□□□ -0.92
TRAPPC3-206ENST00000469757 ZNF484Q5JVG2 852 aa9.33□□□□□ -0.92
TRAPPC3-206ENST00000469757 LARP1BQ659C4 914 aaKnown RBP9.33□□□□□ -0.92
TRAPPC3-206ENST00000469757 RUFY4Q6ZNE9 571 aa9.33□□□□□ -0.92
TRAPPC3-206ENST00000469757 UIMC1Q96RL1 719 aa9.33□□□□□ -0.92
TRAPPC3-206ENST00000469757 CEP89Q96ST8 783 aa9.33□□□□□ -0.92
TRAPPC3-206ENST00000469757 UBE2OQ9C0C9 1292 aaKnown RBP9.33□□□□□ -0.92
TRAPPC3-206ENST00000469757 TTC12Q9H892 705 aaPredicted RBP9.33□□□□□ -0.92
TRAPPC3-206ENST00000469757 GABBR1Q9UBS5 961 aa9.33□□□□□ -0.92
TRAPPC3-206ENST00000469757 CEP131Q9UPN4 1083 aa9.33□□□□□ -0.92
TRAPPC3-206ENST00000469757 PPME1Q9Y570 386 aa9.33□□□□□ -0.92
TRAPPC3-206ENST00000469757 PCDHA2Q9Y5H9 948 aa9.33□□□□□ -0.92
TRAPPC3-206ENST00000469757 MORC2Q9Y6X9 1032 aaPredicted RBP9.33□□□□□ -0.92
TRAPPC3-206ENST00000469757 SMIM35A0A1B0GVV1 85 aa9.32□□□□□ -0.92
TRAPPC3-206ENST00000469757 P4HBP07237 508 aaKnown RBP9.32□□□□□ -0.92
TRAPPC3-206ENST00000469757 QARSP47897 775 aaKnown RBP9.32□□□□□ -0.92
TRAPPC3-206ENST00000469757 CHMP4BP1P59074 171 aa9.32□□□□□ -0.92
TRAPPC3-206ENST00000469757 RESTQ13127 1097 aa9.32□□□□□ -0.92
TRAPPC3-206ENST00000469757 NBR1Q14596 966 aa9.32□□□□□ -0.92
TRAPPC3-206ENST00000469757 XKR3Q5GH77 459 aa9.32□□□□□ -0.92
TRAPPC3-206ENST00000469757 HABP4Q5JVS0 413 aaKnown RBP9.32□□□□□ -0.92
TRAPPC3-206ENST00000469757 TMEM240Q5SV17 173 aa9.32□□□□□ -0.92
TRAPPC3-206ENST00000469757 MTHFD1LQ6UB35 978 aa9.32□□□□□ -0.92
TRAPPC3-206ENST00000469757 FAM43BQ6ZT52 329 aaPredicted RBP9.32□□□□□ -0.92
TRAPPC3-206ENST00000469757 ANO5Q75V66 913 aa9.32□□□□□ -0.92
TRAPPC3-206ENST00000469757 C16orf59Q7L2K0 433 aa9.32□□□□□ -0.92
TRAPPC3-206ENST00000469757 C4orf19Q8IY42 314 aa9.32□□□□□ -0.92
TRAPPC3-206ENST00000469757 IGSF22Q8N9C0 903 aa9.32□□□□□ -0.92
TRAPPC3-206ENST00000469757 HSD17B14Q9BPX1 270 aa9.32□□□□□ -0.92
TRAPPC3-206ENST00000469757 LXNQ9BS40 222 aa9.32□□□□□ -0.92
TRAPPC3-206ENST00000469757 NIFKQ9BYG3 293 aaKnown RBP9.32□□□□□ -0.92
TRAPPC3-206ENST00000469757 WRAP73Q9P2S5 460 aaPredicted RBP9.32□□□□□ -0.92
TRAPPC3-206ENST00000469757 PCDHA12Q9UN75 941 aa9.32□□□□□ -0.92
TRAPPC3-206ENST00000469757 MTMR6Q9Y217 621 aa9.32□□□□□ -0.92
TRAPPC3-206ENST00000469757 SAMM50Q9Y512 469 aa9.32□□□□□ -0.92
TRAPPC3-206ENST00000469757 PCDHB6Q9Y5E3 794 aa9.32□□□□□ -0.92
TRAPPC3-206ENST00000469757 PTPRSQ13332 1948 aa9.32□□□□□ -0.92
TRAPPC3-206ENST00000469757 MICAL3Q7RTP6 2002 aa9.31□□□□□ -0.92
TRAPPC3-206ENST00000469757 IGKV6-21A0A0C4DH24 114 aa9.31□□□□□ -0.92
TRAPPC3-206ENST00000469757 POTEMA6NI47 508 aa9.31□□□□□ -0.92
TRAPPC3-206ENST00000469757 DKC1O60832 514 aaKnown RBP eCLIP9.31□□□□□ -0.92
TRAPPC3-206ENST00000469757 NBNO60934 754 aa9.31□□□□□ -0.92
TRAPPC3-206ENST00000469757 BAIAP3O94812 1187 aa9.31□□□□□ -0.92
TRAPPC3-206ENST00000469757 BMP15O95972 392 aa9.31□□□□□ -0.92
TRAPPC3-206ENST00000469757 MUTP22033 750 aa9.31□□□□□ -0.92
TRAPPC3-206ENST00000469757 CCL23P55773 120 aa9.31□□□□□ -0.92
TRAPPC3-206ENST00000469757 PTGDRQ13258 359 aa9.31□□□□□ -0.92
TRAPPC3-206ENST00000469757 ZNF174Q15697 407 aa9.31□□□□□ -0.92
TRAPPC3-206ENST00000469757 C9orf50Q5SZB4 431 aa9.31□□□□□ -0.92
TRAPPC3-206ENST00000469757 ZNF618Q5T7W0 954 aa9.31□□□□□ -0.92
TRAPPC3-206ENST00000469757 ARL6IP4Q66PJ3 421 aaKnown RBP9.31□□□□□ -0.92
TRAPPC3-206ENST00000469757 MCTP1Q6DN14 999 aa9.31□□□□□ -0.92
TRAPPC3-206ENST00000469757 RSPH3Q86UC2 560 aa9.31□□□□□ -0.92
TRAPPC3-206ENST00000469757 ZNF710Q8N1W2 664 aa9.31□□□□□ -0.92
TRAPPC3-206ENST00000469757 RETREG2Q8NC44 543 aa9.31□□□□□ -0.92
TRAPPC3-206ENST00000469757 TRAPPC12Q8WVT3 735 aa9.31□□□□□ -0.92
TRAPPC3-206ENST00000469757 HERVK_113Q902F9 699 aa9.31□□□□□ -0.92
TRAPPC3-206ENST00000469757 SCLYQ96I15 445 aa9.31□□□□□ -0.92
TRAPPC3-206ENST00000469757 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.31□□□□□ -0.921e-7■■■■■ 27.7
TRAPPC3-206ENST00000469757 SQORQ9Y6N5 450 aa9.31□□□□□ -0.92
TRAPPC3-206ENST00000469757 VPS37CA5D8V6 355 aaPredicted RBP9.3□□□□□ -0.92
TRAPPC3-206ENST00000469757 RSPH10B2B2RC85 870 aa9.3□□□□□ -0.92
TRAPPC3-206ENST00000469757 MAGEB2O15479 319 aa9.3□□□□□ -0.92
TRAPPC3-206ENST00000469757 STX6O43752 255 aa9.3□□□□□ -0.92
TRAPPC3-206ENST00000469757 GAS2O43903 313 aaKnown RBP9.3□□□□□ -0.92
TRAPPC3-206ENST00000469757 RSPH10BP0C881 870 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms