RNA–Protein interactions for RNA: ENST00000469670.1

TTC28-205, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 3

Gene TTC28, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-205ENST00000469670 IGSF9BQ9UPX0 1349 aa20.97■□□□□ 0.95
TTC28-205ENST00000469670 FSD2A1L4K1 749 aa20.96■□□□□ 0.95
TTC28-205ENST00000469670 ITGB5P18084 799 aa20.96■□□□□ 0.95
TTC28-205ENST00000469670 WTAPQ15007 396 aa20.96■□□□□ 0.95
TTC28-205ENST00000469670 DUSP6Q16828 381 aa20.96■□□□□ 0.95
TTC28-205ENST00000469670 CELF4Q9BZC1 486 aaKnown RBP20.96■□□□□ 0.95
TTC28-205ENST00000469670 IL25Q9H293 177 aa20.96■□□□□ 0.95
TTC28-205ENST00000469670 TMX1Q9H3N1 280 aa20.96■□□□□ 0.95
TTC28-205ENST00000469670 AAASQ9NRG9 546 aa20.96■□□□□ 0.95
TTC28-205ENST00000469670 KIAA1671Q9BY89 1806 aa20.95■□□□□ 0.94
TTC28-205ENST00000469670 H0Y858 1186 aa20.95■□□□□ 0.94
TTC28-205ENST00000469670 SARSP49591 514 aaKnown RBP20.95■□□□□ 0.94
TTC28-205ENST00000469670 ERVFC1P60507 584 aa20.95■□□□□ 0.94
TTC28-205ENST00000469670 CATIPQ7Z7H3 387 aa20.95■□□□□ 0.94
TTC28-205ENST00000469670 RRP36Q96EU6 259 aaKnown RBP20.95■□□□□ 0.94
TTC28-205ENST00000469670 PCYT2Q99447 389 aa20.95■□□□□ 0.94
TTC28-205ENST00000469670 PCDHB7Q9Y5E2 793 aa20.95■□□□□ 0.94
TTC28-205ENST00000469670 PCDHA2Q9Y5H9 948 aa20.95■□□□□ 0.94
TTC28-205ENST00000469670 CACNA1HO95180 2353 aa20.95■□□□□ 0.94
TTC28-205ENST00000469670 BAZ2BQ9UIF8 2168 aaKnown RBP20.95■□□□□ 0.94
TTC28-205ENST00000469670 CFAP54Q96N23 3096 aa20.94■□□□□ 0.94
TTC28-205ENST00000469670 KAT6AQ92794 2004 aa20.94■□□□□ 0.94
TTC28-205ENST00000469670 FGF18O76093 207 aa20.94■□□□□ 0.94
TTC28-205ENST00000469670 PDGFBP01127 241 aaPredicted RBP20.94■□□□□ 0.94
TTC28-205ENST00000469670 NUBP1P53384 320 aa20.94■□□□□ 0.94
TTC28-205ENST00000469670 FOXK2Q01167 660 aa20.94■□□□□ 0.94
TTC28-205ENST00000469670 MTMR1Q13613 665 aa20.94■□□□□ 0.94
TTC28-205ENST00000469670 TMEM266Q2M3C6 531 aa20.94■□□□□ 0.94
TTC28-205ENST00000469670 ZBTB33Q86T24 672 aa20.94■□□□□ 0.94
TTC28-205ENST00000469670 CHD1LQ86WJ1 897 aa20.94■□□□□ 0.94
TTC28-205ENST00000469670 SMC5Q8IY18 1101 aa20.94■□□□□ 0.94
TTC28-205ENST00000469670 TNPO1Q92973 898 aaKnown RBP20.94■□□□□ 0.94
TTC28-205ENST00000469670 RIPOR3Q96MK2 946 aa20.94■□□□□ 0.94
TTC28-205ENST00000469670 SPZ1Q9BXG8 430 aa20.94■□□□□ 0.94
TTC28-205ENST00000469670 S1PR5Q9H228 398 aa20.94■□□□□ 0.94
TTC28-205ENST00000469670 TRPC6Q9Y210 931 aa20.94■□□□□ 0.94
TTC28-205ENST00000469670 UBIAD1Q9Y5Z9 338 aa20.94■□□□□ 0.94
TTC28-205ENST00000469670 TBKBP1A7MCY6 615 aa20.93■□□□□ 0.94
TTC28-205ENST00000469670 SRGAP2BP0DMP2 458 aa20.93■□□□□ 0.94
TTC28-205ENST00000469670 NFX1Q12986 1120 aaKnown RBP20.93■□□□□ 0.94
TTC28-205ENST00000469670 SART3Q15020 963 aaKnown RBP20.93■□□□□ 0.94
TTC28-205ENST00000469670 PDE12Q6L8Q7 609 aaKnown RBP20.93■□□□□ 0.94
TTC28-205ENST00000469670 TMEM184AQ6ZMB5 413 aa20.93■□□□□ 0.94
TTC28-205ENST00000469670 THNSL1Q8IYQ7 743 aa20.93■□□□□ 0.94
TTC28-205ENST00000469670 TRAPPC12Q8WVT3 735 aa20.93■□□□□ 0.94
TTC28-205ENST00000469670 AZI2Q9H6S1 392 aa20.93■□□□□ 0.94
TTC28-205ENST00000469670 KDM3AQ9Y4C1 1321 aa20.93■□□□□ 0.94
TTC28-205ENST00000469670 PROB1E7EW31 1015 aa20.92■□□□□ 0.94
TTC28-205ENST00000469670 FSCN2O14926 492 aa20.92■□□□□ 0.94
TTC28-205ENST00000469670 CYP21A2P08686 494 aa20.92■□□□□ 0.94
TTC28-205ENST00000469670 TECP42680 631 aa20.92■□□□□ 0.94
TTC28-205ENST00000469670 KRT76Q01546 638 aa20.92■□□□□ 0.94
TTC28-205ENST00000469670 ANKRD54Q6NXT1 300 aa20.92■□□□□ 0.94
TTC28-205ENST00000469670 RALYLQ86SE5 291 aaKnown RBP20.92■□□□□ 0.94
TTC28-205ENST00000469670 NME8Q8N427 588 aa20.92■□□□□ 0.94
TTC28-205ENST00000469670 JPH1Q9HDC5 661 aaPredicted RBP20.92■□□□□ 0.94
TTC28-205ENST00000469670 JADE2Q9NQC1 790 aa20.92■□□□□ 0.94
TTC28-205ENST00000469670 TMEM260Q9NX78 707 aa20.92■□□□□ 0.94
TTC28-205ENST00000469670 SEC63Q9UGP8 760 aaKnown RBP20.92■□□□□ 0.94
TTC28-205ENST00000469670 U3KPZ7 1027 aaPredicted RBP20.92■□□□□ 0.94
TTC28-205ENST00000469670 SMIM35A0A1B0GVV1 85 aa20.91■□□□□ 0.94
TTC28-205ENST00000469670 MAFGO15525 162 aa20.91■□□□□ 0.94
TTC28-205ENST00000469670 GALR2O43603 387 aaPredicted RBP20.91■□□□□ 0.94
TTC28-205ENST00000469670 MGEA5O60502 916 aa20.91■□□□□ 0.94
TTC28-205ENST00000469670 SP100P23497 879 aaPredicted RBP20.91■□□□□ 0.94
TTC28-205ENST00000469670 KCNC3Q14003 757 aa20.91■□□□□ 0.94
TTC28-205ENST00000469670 PLCB4Q15147 1175 aa20.91■□□□□ 0.94
TTC28-205ENST00000469670 FAM102BQ5T8I3 360 aa20.91■□□□□ 0.94
TTC28-205ENST00000469670 COLGALT1Q8NBJ5 622 aa20.91■□□□□ 0.94
TTC28-205ENST00000469670 APOL5Q9BWW9 433 aa20.91■□□□□ 0.94
TTC28-205ENST00000469670 PSTPIP2Q9H939 334 aa20.91■□□□□ 0.94
TTC28-205ENST00000469670 ERVK-5Q9HDB9 667 aa20.91■□□□□ 0.94
TTC28-205ENST00000469670 TYW1Q9NV66 732 aaKnown RBP20.91■□□□□ 0.94
TTC28-205ENST00000469670 RNF216Q9NWF9 866 aaPredicted RBP20.91■□□□□ 0.94
TTC28-205ENST00000469670 HCSTQ9UBK5 93 aa20.91■□□□□ 0.94
TTC28-205ENST00000469670 PLXNA4Q9HCM2 1894 aa20.9■□□□□ 0.94
TTC28-205ENST00000469670 NUCB1Q02818 461 aa20.9■□□□□ 0.94
TTC28-205ENST00000469670 PLPP4Q5VZY2 271 aa20.9■□□□□ 0.94
TTC28-205ENST00000469670 SYCE2Q6PIF2 218 aa20.9■□□□□ 0.94
TTC28-205ENST00000469670 FAM43BQ6ZT52 329 aaPredicted RBP20.9■□□□□ 0.94
TTC28-205ENST00000469670 ASCL5Q7RTU5 278 aa20.9■□□□□ 0.94
TTC28-205ENST00000469670 NCOA7Q8NI08 942 aa20.9■□□□□ 0.94
TTC28-205ENST00000469670 CTCFLQ8NI51 663 aaPredicted RBP20.9■□□□□ 0.94
TTC28-205ENST00000469670 RGS18Q9NS28 235 aa20.9■□□□□ 0.94
TTC28-205ENST00000469670 C1orf112Q9NSG2 853 aa20.9■□□□□ 0.94
TTC28-205ENST00000469670 SLC9A2Q9UBY0 812 aa20.9■□□□□ 0.94
TTC28-205ENST00000469670 GINS2Q9Y248 185 aa20.9■□□□□ 0.94
TTC28-205ENST00000469670 DENND3A2RUS2 1198 aa20.89■□□□□ 0.93
TTC28-205ENST00000469670 SMARCA1P28370 1054 aa20.89■□□□□ 0.93
TTC28-205ENST00000469670 APOBRQ0VD83 1088 aa20.89■□□□□ 0.93
TTC28-205ENST00000469670 UBE2SQ16763 222 aa20.89■□□□□ 0.93
TTC28-205ENST00000469670 LLGL2Q6P1M3 1020 aa20.89■□□□□ 0.93
TTC28-205ENST00000469670 MTHFD1LQ6UB35 978 aa20.89■□□□□ 0.93
TTC28-205ENST00000469670 PLPPR4Q7Z2D5 763 aa20.89■□□□□ 0.93
TTC28-205ENST00000469670 KREMEN2Q8NCW0 462 aa20.89■□□□□ 0.93
TTC28-205ENST00000469670 RASGRP4Q8TDF6 673 aa20.89■□□□□ 0.93
TTC28-205ENST00000469670 IGDCC4Q8TDY8 1250 aa20.89■□□□□ 0.93
TTC28-205ENST00000469670 MAP3K14Q99558 947 aa20.89■□□□□ 0.93
TTC28-205ENST00000469670 ADAM2Q99965 735 aa20.89■□□□□ 0.93
TTC28-205ENST00000469670 MYL10Q9BUA6 226 aa20.89■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms