RNA–Protein interactions for RNA: ENST00000469006.1

SNED1-209, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

TSL 5

Gene SNED1, Length 963 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-209ENST00000469006 EFHBQ8N7U6 833 aa16.64■□□□□ 0.25
SNED1-209ENST00000469006 TRAPPC12Q8WVT3 735 aa16.64■□□□□ 0.25
SNED1-209ENST00000469006 POF1BQ8WVV4 589 aa16.64■□□□□ 0.25
SNED1-209ENST00000469006 EDAQ92838 391 aa16.64■□□□□ 0.25
SNED1-209ENST00000469006 AZI2Q9H6S1 392 aa16.64■□□□□ 0.25
SNED1-209ENST00000469006 JADE2Q9NQC1 790 aa16.64■□□□□ 0.25
SNED1-209ENST00000469006 CLEC1BQ9P126 229 aa16.64■□□□□ 0.25
SNED1-209ENST00000469006 PADI3Q9ULW8 664 aa16.64■□□□□ 0.25
SNED1-209ENST00000469006 SQORQ9Y6N5 450 aa16.64■□□□□ 0.25
SNED1-209ENST00000469006 IGSF9BQ9UPX0 1349 aa16.64■□□□□ 0.25
SNED1-209ENST00000469006 hCG_1642624A0A1W2PR95 340 aa16.63■□□□□ 0.25
SNED1-209ENST00000469006 PRC1O43663 620 aa16.63■□□□□ 0.25
SNED1-209ENST00000469006 IBSPP21815 317 aaPredicted RBP16.63■□□□□ 0.25
SNED1-209ENST00000469006 NRIP1P48552 1158 aa16.63■□□□□ 0.25
SNED1-209ENST00000469006 SMRP1Q8NCR6 262 aa16.63■□□□□ 0.25
SNED1-209ENST00000469006 SLC9A2Q9UBY0 812 aa16.63■□□□□ 0.25
SNED1-209ENST00000469006 BARX2Q9UMQ3 279 aaPredicted RBP16.63■□□□□ 0.25
SNED1-209ENST00000469006 PCDHA6Q9UN73 950 aa16.63■□□□□ 0.25
SNED1-209ENST00000469006 PCDHGC5Q9Y5F6 944 aa16.63■□□□□ 0.25
SNED1-209ENST00000469006 PCDHA8Q9Y5H6 950 aa16.63■□□□□ 0.25
SNED1-209ENST00000469006 RBM8AQ9Y5S9 174 aaKnown RBP16.63■□□□□ 0.25
SNED1-209ENST00000469006 TMEM221A6NGB7 291 aa16.62■□□□□ 0.25
SNED1-209ENST00000469006 CCDC69A6NI79 296 aa16.62■□□□□ 0.25
SNED1-209ENST00000469006 M0R296 226 aa16.62■□□□□ 0.25
SNED1-209ENST00000469006 SH2B2O14492 632 aaPredicted RBP16.62■□□□□ 0.25
SNED1-209ENST00000469006 MAFGO15525 162 aa16.62■□□□□ 0.25
SNED1-209ENST00000469006 GLP2RO95838 553 aa16.62■□□□□ 0.25
SNED1-209ENST00000469006 COASYQ13057 564 aa16.62■□□□□ 0.25
SNED1-209ENST00000469006 PLCB4Q15147 1175 aa16.62■□□□□ 0.25
SNED1-209ENST00000469006 RBM23Q86U06 439 aaKnown RBP16.62■□□□□ 0.25
SNED1-209ENST00000469006 RAB11FIP4Q86YS3 637 aa16.62■□□□□ 0.25
SNED1-209ENST00000469006 CELF4Q9BZC1 486 aaKnown RBP16.62■□□□□ 0.25
SNED1-209ENST00000469006 LRFN2Q9ULH4 789 aa16.62■□□□□ 0.25
SNED1-209ENST00000469006 USP15Q9Y4E8 981 aaPredicted RBP16.62■□□□□ 0.25
SNED1-209ENST00000469006 PCDHA2Q9Y5H9 948 aa16.62■□□□□ 0.25
SNED1-209ENST00000469006 PLXNA4Q9HCM2 1894 aa16.61■□□□□ 0.25
SNED1-209ENST00000469006 LOXHD1Q8IVV2 1947 aa16.61■□□□□ 0.25
SNED1-209ENST00000469006 ACTR2P61160 394 aa16.61■□□□□ 0.25
SNED1-209ENST00000469006 TMEM266Q2M3C6 531 aa16.61■□□□□ 0.25
SNED1-209ENST00000469006 TRIM67Q6ZTA4 783 aa16.61■□□□□ 0.25
SNED1-209ENST00000469006 HEATR3Q7Z4Q2 680 aa16.61■□□□□ 0.25
SNED1-209ENST00000469006 PRSS33Q8NF86 280 aa16.61■□□□□ 0.25
SNED1-209ENST00000469006 MAP4K1Q92918 833 aa16.61■□□□□ 0.25
SNED1-209ENST00000469006 TNPO1Q92973 898 aaKnown RBP16.61■□□□□ 0.25
SNED1-209ENST00000469006 TMX1Q9H3N1 280 aa16.61■□□□□ 0.25
SNED1-209ENST00000469006 KCNH7Q9NS40 1196 aa16.61■□□□□ 0.25
SNED1-209ENST00000469006 ZDBF2Q9HCK1 2354 aa16.6■□□□□ 0.25
SNED1-209ENST00000469006 SMIM35A0A1B0GVV1 85 aa16.6■□□□□ 0.25
SNED1-209ENST00000469006 LOC730098B7Z3J9 87 aa16.6■□□□□ 0.25
SNED1-209ENST00000469006 PPFIA3O75145 1194 aa16.6■□□□□ 0.25
SNED1-209ENST00000469006 MCM5P33992 734 aa16.6■□□□□ 0.25
SNED1-209ENST00000469006 KRT76Q01546 638 aa16.6■□□□□ 0.25
SNED1-209ENST00000469006 BMP8AQ7Z5Y6 402 aa16.6■□□□□ 0.25
SNED1-209ENST00000469006 MXRA8Q9BRK3 442 aa16.6■□□□□ 0.25
SNED1-209ENST00000469006 SDF4Q9BRK5 362 aa16.6■□□□□ 0.25
SNED1-209ENST00000469006 MTA3Q9BTC8 594 aa16.6■□□□□ 0.25
SNED1-209ENST00000469006 TLE6Q9H808 572 aa16.6■□□□□ 0.25
SNED1-209ENST00000469006 KDM3AQ9Y4C1 1321 aa16.6■□□□□ 0.25
SNED1-209ENST00000469006 CALM1P0DP23 149 aa16.59■□□□□ 0.25
SNED1-209ENST00000469006 CALM2P0DP24 149 aa16.59■□□□□ 0.25
SNED1-209ENST00000469006 CALM3P0DP25 149 aa16.59■□□□□ 0.25
SNED1-209ENST00000469006 SARSP49591 514 aaKnown RBP16.59■□□□□ 0.25
SNED1-209ENST00000469006 STAT5BP51692 787 aa16.59■□□□□ 0.25
SNED1-209ENST00000469006 ZXDAP98168 799 aa16.59■□□□□ 0.25
SNED1-209ENST00000469006 NFX1Q12986 1120 aaKnown RBP16.59■□□□□ 0.25
SNED1-209ENST00000469006 COL9A3Q14050 684 aaPredicted RBP16.59■□□□□ 0.25
SNED1-209ENST00000469006 CBX2Q14781 532 aaPredicted RBP16.59■□□□□ 0.25
SNED1-209ENST00000469006 BMP2KLQ5H9B9 411 aa16.59■□□□□ 0.25
SNED1-209ENST00000469006 SPOUT1Q5T280 376 aaKnown RBP16.59■□□□□ 0.25
SNED1-209ENST00000469006 MTHFD1LQ6UB35 978 aa16.59■□□□□ 0.25
SNED1-209ENST00000469006 TMTC3Q6ZXV5 915 aa16.59■□□□□ 0.25
SNED1-209ENST00000469006 PLPPR4Q7Z2D5 763 aa16.59■□□□□ 0.25
SNED1-209ENST00000469006 TMTC2Q8N394 836 aa16.59■□□□□ 0.25
SNED1-209ENST00000469006 CCDC82Q8N4S0 544 aa16.59■□□□□ 0.25
SNED1-209ENST00000469006 CYP2W1Q8TAV3 490 aa16.59■□□□□ 0.25
SNED1-209ENST00000469006 PBXIP1Q96AQ6 731 aa16.59■□□□□ 0.25
SNED1-209ENST00000469006 TMEM87BQ96K49 555 aa16.59■□□□□ 0.25
SNED1-209ENST00000469006 PHOX2BQ99453 314 aa16.59■□□□□ 0.25
SNED1-209ENST00000469006 GINS2Q9Y248 185 aa16.59■□□□□ 0.25
SNED1-209ENST00000469006 NFASCO94856 1347 aa16.59■□□□□ 0.25
SNED1-209ENST00000469006 MGEA5O60502 916 aa16.58■□□□□ 0.24
SNED1-209ENST00000469006 PTPN5P54829 565 aa16.58■□□□□ 0.24
SNED1-209ENST00000469006 RBM10P98175 930 aaKnown RBP16.58■□□□□ 0.24
SNED1-209ENST00000469006 UBE3AQ05086 875 aa16.58■□□□□ 0.24
SNED1-209ENST00000469006 ITGB3BPQ13352 177 aaPredicted RBP16.58■□□□□ 0.24
SNED1-209ENST00000469006 IER5LQ5T953 404 aa16.58■□□□□ 0.24
SNED1-209ENST00000469006 SUGP1Q8IWZ8 645 aaKnown RBP16.58■□□□□ 0.24
SNED1-209ENST00000469006 NME8Q8N427 588 aa16.58■□□□□ 0.24
SNED1-209ENST00000469006 MICAL1Q8TDZ2 1067 aa16.58■□□□□ 0.24
SNED1-209ENST00000469006 PGBD1Q96JS3 809 aa16.58■□□□□ 0.24
SNED1-209ENST00000469006 PHF7Q9BWX1 381 aaPredicted RBP16.58■□□□□ 0.24
SNED1-209ENST00000469006 ERVK-5Q9HDB9 667 aa16.58■□□□□ 0.24
SNED1-209ENST00000469006 TLR9Q9NR96 1032 aa16.58■□□□□ 0.24
SNED1-209ENST00000469006 PPP4R2Q9NY27 417 aa16.58■□□□□ 0.24
SNED1-209ENST00000469006 PCDHB7Q9Y5E2 793 aa16.58■□□□□ 0.24
SNED1-209ENST00000469006 PCDHB12Q9Y5F1 795 aa16.58■□□□□ 0.24
SNED1-209ENST00000469006 SLC12A7Q9Y666 1083 aa16.58■□□□□ 0.24
SNED1-209ENST00000469006 TBKBP1A7MCY6 615 aa16.57■□□□□ 0.24
SNED1-209ENST00000469006 PER2O15055 1255 aa16.57■□□□□ 0.24
SNED1-209ENST00000469006 RPS6KA5O75582 802 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms