RNA–Protein interactions for RNA: ENST00000468876.1

ARHGEF39-202, Transcript of Rho guanine nucleotide exchange factor 39, humanhuman

TSL 2

Gene ARHGEF39, Length 739 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39-202ENST00000468876 MRVI1Q9Y6F6 885 aa13.48□□□□□ -0.25
ARHGEF39-202ENST00000468876 ANKRD11Q6UB99 2663 aaPredicted RBP13.47□□□□□ -0.25
ARHGEF39-202ENST00000468876 SOBPA7XYQ1 873 aa13.47□□□□□ -0.25
ARHGEF39-202ENST00000468876 B4DLN1 442 aa13.47□□□□□ -0.25
ARHGEF39-202ENST00000468876 PLEKHA8P1O95397 391 aa13.47□□□□□ -0.25
ARHGEF39-202ENST00000468876 MYCLP12524 364 aaPredicted RBP13.47□□□□□ -0.25
ARHGEF39-202ENST00000468876 RXRAP19793 462 aa13.47□□□□□ -0.25
ARHGEF39-202ENST00000468876 UBA1P22314 1058 aaKnown RBP13.47□□□□□ -0.25
ARHGEF39-202ENST00000468876 MRPL12P52815 198 aaKnown RBP13.47□□□□□ -0.25
ARHGEF39-202ENST00000468876 LMNB2Q03252 620 aa13.47□□□□□ -0.25
ARHGEF39-202ENST00000468876 PGM5Q15124 567 aa13.47□□□□□ -0.25
ARHGEF39-202ENST00000468876 KIAA0753Q2KHM9 967 aa13.47□□□□□ -0.25
ARHGEF39-202ENST00000468876 NAALADL2Q58DX5 795 aa13.47□□□□□ -0.25
ARHGEF39-202ENST00000468876 PPM1JQ5JR12 505 aa13.47□□□□□ -0.25
ARHGEF39-202ENST00000468876 GPR161Q8N6U8 529 aaKnown RBP13.47□□□□□ -0.25
ARHGEF39-202ENST00000468876 KLHL23Q8NBE8 558 aa13.47□□□□□ -0.25
ARHGEF39-202ENST00000468876 IGDCC4Q8TDY8 1250 aa13.47□□□□□ -0.25
ARHGEF39-202ENST00000468876 ATP8B4Q8TF62 1192 aa13.47□□□□□ -0.25
ARHGEF39-202ENST00000468876 IWS1Q96ST2 819 aa13.47□□□□□ -0.25
ARHGEF39-202ENST00000468876 BCAS3Q9H6U6 928 aa13.47□□□□□ -0.25
ARHGEF39-202ENST00000468876 LIMD1Q9UGP4 676 aa13.47□□□□□ -0.25
ARHGEF39-202ENST00000468876 FRMPD4Q14CM0 1322 aa13.46□□□□□ -0.25
ARHGEF39-202ENST00000468876 FSD2A1L4K1 749 aa13.46□□□□□ -0.25
ARHGEF39-202ENST00000468876 SH2B2O14492 632 aaPredicted RBP13.46□□□□□ -0.25
ARHGEF39-202ENST00000468876 PRC1O43663 620 aa13.46□□□□□ -0.25
ARHGEF39-202ENST00000468876 NPR3P17342 541 aa13.46□□□□□ -0.25
ARHGEF39-202ENST00000468876 HIC1Q14526 733 aa13.46□□□□□ -0.25
ARHGEF39-202ENST00000468876 DGKDQ16760 1214 aa13.46□□□□□ -0.25
ARHGEF39-202ENST00000468876 ANKRD54Q6NXT1 300 aa13.46□□□□□ -0.25
ARHGEF39-202ENST00000468876 LLGL2Q6P1M3 1020 aa13.46□□□□□ -0.25
ARHGEF39-202ENST00000468876 FCHSD1Q86WN1 690 aa13.46□□□□□ -0.25
ARHGEF39-202ENST00000468876 ZNF654Q8IZM8 581 aa13.46□□□□□ -0.25
ARHGEF39-202ENST00000468876 APBB2Q92870 758 aa13.46□□□□□ -0.25
ARHGEF39-202ENST00000468876 ESYT1Q9BSJ8 1104 aa13.46□□□□□ -0.25
ARHGEF39-202ENST00000468876 LRRC2Q9BYS8 371 aa13.46□□□□□ -0.25
ARHGEF39-202ENST00000468876 MAF1Q9H063 256 aa13.46□□□□□ -0.25
ARHGEF39-202ENST00000468876 S1PR5Q9H228 398 aa13.46□□□□□ -0.25
ARHGEF39-202ENST00000468876 TELO2Q9Y4R8 837 aa13.46□□□□□ -0.25
ARHGEF39-202ENST00000468876 DOCK5Q9H7D0 1870 aa13.45□□□□□ -0.26
ARHGEF39-202ENST00000468876 ERICH2A1L162 156 aa13.45□□□□□ -0.26
ARHGEF39-202ENST00000468876 SLC27A2O14975 620 aa13.45□□□□□ -0.26
ARHGEF39-202ENST00000468876 KINO60870 393 aaKnown RBP13.45□□□□□ -0.26
ARHGEF39-202ENST00000468876 EIF3JO75822 258 aaKnown RBP13.45□□□□□ -0.26
ARHGEF39-202ENST00000468876 F2P00734 622 aa13.45□□□□□ -0.26
ARHGEF39-202ENST00000468876 SP2Q02086 613 aa13.45□□□□□ -0.26
ARHGEF39-202ENST00000468876 SEMA3FQ13275 785 aa13.45□□□□□ -0.26
ARHGEF39-202ENST00000468876 SART3Q15020 963 aaKnown RBP13.45□□□□□ -0.26
ARHGEF39-202ENST00000468876 HSDL1Q3SXM5 330 aa13.45□□□□□ -0.26
ARHGEF39-202ENST00000468876 VARS2Q5ST30 1063 aaKnown RBP13.45□□□□□ -0.26
ARHGEF39-202ENST00000468876 CATIPQ7Z7H3 387 aa13.45□□□□□ -0.26
ARHGEF39-202ENST00000468876 SIX5Q8N196 739 aa13.45□□□□□ -0.26
ARHGEF39-202ENST00000468876 CMTR1Q8N1G2 835 aaKnown RBP13.45□□□□□ -0.26
ARHGEF39-202ENST00000468876 TDRD5Q8NAT2 981 aaKnown RBP13.45□□□□□ -0.26
ARHGEF39-202ENST00000468876 SECISBP2LQ93073 1101 aaKnown RBP13.45□□□□□ -0.26
ARHGEF39-202ENST00000468876 EMID1Q96A84 441 aaPredicted RBP13.45□□□□□ -0.26
ARHGEF39-202ENST00000468876 CDCA3Q99618 268 aaPredicted RBP13.45□□□□□ -0.26
ARHGEF39-202ENST00000468876 OSBPL7Q9BZF2 842 aa13.45□□□□□ -0.26
ARHGEF39-202ENST00000468876 ERVK-5Q9HDB9 667 aa13.45□□□□□ -0.26
ARHGEF39-202ENST00000468876 CDH22Q9UJ99 828 aa13.45□□□□□ -0.26
ARHGEF39-202ENST00000468876 ANGPTL2Q9UKU9 493 aa13.45□□□□□ -0.26
ARHGEF39-202ENST00000468876 USP18Q9UMW8 372 aa13.45□□□□□ -0.26
ARHGEF39-202ENST00000468876 MRPL42Q9Y6G3 142 aaKnown RBP13.45□□□□□ -0.26
ARHGEF39-202ENST00000468876 GPR179Q6PRD1 2367 aa13.45□□□□□ -0.26
ARHGEF39-202ENST00000468876 OTOGLQ3ZCN5 2332 aa13.45□□□□□ -0.26
ARHGEF39-202ENST00000468876 PNMA6FA0A0J9YX94 578 aa13.44□□□□□ -0.26
ARHGEF39-202ENST00000468876 hCG_1642624A0A1W2PR95 340 aa13.44□□□□□ -0.26
ARHGEF39-202ENST00000468876 GCOM1H8Y6P7 765 aaPredicted RBP13.44□□□□□ -0.26
ARHGEF39-202ENST00000468876 DDAH1O94760 285 aa13.44□□□□□ -0.26
ARHGEF39-202ENST00000468876 GGPS1O95749 300 aa13.44□□□□□ -0.26
ARHGEF39-202ENST00000468876 POLR2MP0CAP2 368 aa13.44□□□□□ -0.26
ARHGEF39-202ENST00000468876 SP9P0CG40 484 aa13.44□□□□□ -0.26
ARHGEF39-202ENST00000468876 HOXD8P13378 290 aaPredicted RBP13.44□□□□□ -0.26
ARHGEF39-202ENST00000468876 MRPS9P82933 396 aaKnown RBP13.44□□□□□ -0.26
ARHGEF39-202ENST00000468876 DUSP6Q16828 381 aa13.44□□□□□ -0.26
ARHGEF39-202ENST00000468876 CREB3L3Q68CJ9 461 aa13.44□□□□□ -0.26
ARHGEF39-202ENST00000468876 SERINC5Q86VE9 423 aa13.44□□□□□ -0.26
ARHGEF39-202ENST00000468876 VSIG10LQ86VR7 867 aa13.44□□□□□ -0.26
ARHGEF39-202ENST00000468876 CRIPAKQ8N1N5 446 aa13.44□□□□□ -0.26
ARHGEF39-202ENST00000468876 SUMF1Q8NBK3 374 aa13.44□□□□□ -0.26
ARHGEF39-202ENST00000468876 PPTC7Q8NI37 304 aa13.44□□□□□ -0.26
ARHGEF39-202ENST00000468876 SPZ1Q9BXG8 430 aa13.44□□□□□ -0.26
ARHGEF39-202ENST00000468876 POMKQ9H5K3 350 aa13.44□□□□□ -0.26
ARHGEF39-202ENST00000468876 ANO2Q9NQ90 1003 aa13.44□□□□□ -0.26
ARHGEF39-202ENST00000468876 HAS3O00219 553 aa13.43□□□□□ -0.26
ARHGEF39-202ENST00000468876 CCND2P30279 289 aa13.43□□□□□ -0.26
ARHGEF39-202ENST00000468876 PAN2Q504Q3 1202 aaKnown RBP13.43□□□□□ -0.26
ARHGEF39-202ENST00000468876 SPECC1Q5M775 1068 aa13.43□□□□□ -0.26
ARHGEF39-202ENST00000468876 CELF3Q5SZQ8 465 aaKnown RBP13.43□□□□□ -0.26
ARHGEF39-202ENST00000468876 MYSM1Q5VVJ2 828 aa13.43□□□□□ -0.26
ARHGEF39-202ENST00000468876 CES5AQ6NT32 575 aa13.43□□□□□ -0.26
ARHGEF39-202ENST00000468876 SYCE2Q6PIF2 218 aa13.43□□□□□ -0.26
ARHGEF39-202ENST00000468876 USP17L6PQ6QN14 398 aa13.43□□□□□ -0.26
ARHGEF39-202ENST00000468876 SRBD1Q8N5C6 995 aaKnown RBP13.43□□□□□ -0.26
ARHGEF39-202ENST00000468876 SPATA33Q96N06 139 aa13.43□□□□□ -0.26
ARHGEF39-202ENST00000468876 LAMC2Q13753 1193 aa13.42□□□□□ -0.26
ARHGEF39-202ENST00000468876 TRIM50Q86XT4 487 aa13.42□□□□□ -0.26
ARHGEF39-202ENST00000468876 CTCFLQ8NI51 663 aaPredicted RBP13.42□□□□□ -0.26
ARHGEF39-202ENST00000468876 ATP6V0A1Q93050 837 aa13.42□□□□□ -0.26
ARHGEF39-202ENST00000468876 TCEANC2Q96MN5 208 aa13.42□□□□□ -0.26
ARHGEF39-202ENST00000468876 NECTIN4Q96NY8 510 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms