RNA–Protein interactions for RNA: ENST00000467663.5

CTNS-205, Transcript of cystinosin, lysosomal cystine transporter, human

TSL 3

Gene CTNS, Length 590 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CTNS-205	ENST00000467663	SREBF1	P36956	1147 aa		13.59	□□□□□ -0.23
CTNS-205	ENST00000467663	ADAM17	P78536	824 aa		13.59	□□□□□ -0.23
CTNS-205	ENST00000467663	MBTPS1	Q14703	1052 aa		13.59	□□□□□ -0.23
CTNS-205	ENST00000467663	FOXD4L6	Q3SYB3	417 aa	Predicted RBP	13.59	□□□□□ -0.23
CTNS-205	ENST00000467663	ARL6IP4	Q66PJ3	421 aa	Known RBP	13.59	□□□□□ -0.23
CTNS-205	ENST00000467663	ADAL	Q6DHV7	355 aa		13.59	□□□□□ -0.23
CTNS-205	ENST00000467663	FAM173B	Q6P4H8	233 aa		13.59	□□□□□ -0.23
CTNS-205	ENST00000467663	CNKSR3	Q6P9H4	555 aa		13.59	□□□□□ -0.23
CTNS-205	ENST00000467663	MOXD1	Q6UVY6	613 aa		13.59	□□□□□ -0.23
CTNS-205	ENST00000467663	FOXD4L3	Q6VB84	417 aa	Predicted RBP	13.59	□□□□□ -0.23
CTNS-205	ENST00000467663	PIK3AP1	Q6ZUJ8	805 aa		13.59	□□□□□ -0.23
CTNS-205	ENST00000467663	NEK8	Q86SG6	692 aa		13.59	□□□□□ -0.23
CTNS-205	ENST00000467663	SYAP1	Q96A49	352 aa	Predicted RBP	13.59	□□□□□ -0.23
CTNS-205	ENST00000467663	PGBD1	Q96JS3	809 aa		13.59	□□□□□ -0.23
CTNS-205	ENST00000467663	KCNH7	Q9NS40	1196 aa		13.59	□□□□□ -0.23
CTNS-205	ENST00000467663	SETD4	Q9NVD3	440 aa		13.59	□□□□□ -0.23
CTNS-205	ENST00000467663	TMEM260	Q9NX78	707 aa		13.59	□□□□□ -0.23
CTNS-205	ENST00000467663		A0A1W2PQ27	194 aa		13.58	□□□□□ -0.24
CTNS-205	ENST00000467663		A0A1W2PQ64	194 aa		13.58	□□□□□ -0.24
CTNS-205	ENST00000467663		A0A1W2PQD8	194 aa		13.58	□□□□□ -0.24
CTNS-205	ENST00000467663	MEIS1	O00470	390 aa		13.58	□□□□□ -0.24
CTNS-205	ENST00000467663	TRAK2	O60296	914 aa		13.58	□□□□□ -0.24
CTNS-205	ENST00000467663	CAND2	O75155	1236 aa		13.58	□□□□□ -0.24
CTNS-205	ENST00000467663	MYOG	P15173	224 aa		13.58	□□□□□ -0.24
CTNS-205	ENST00000467663	THPO	P40225	353 aa		13.58	□□□□□ -0.24
CTNS-205	ENST00000467663	USP11	P51784	963 aa		13.58	□□□□□ -0.24
CTNS-205	ENST00000467663	PTPA	Q15257	358 aa		13.58	□□□□□ -0.24
CTNS-205	ENST00000467663	TCTN1	Q2MV58	587 aa		13.58	□□□□□ -0.24
CTNS-205	ENST00000467663	CEP55	Q53EZ4	464 aa		13.58	□□□□□ -0.24
CTNS-205	ENST00000467663	TTC38	Q5R3I4	469 aa		13.58	□□□□□ -0.24
CTNS-205	ENST00000467663	HERC6	Q8IVU3	1022 aa		13.58	□□□□□ -0.24
CTNS-205	ENST00000467663	CYP2W1	Q8TAV3	490 aa		13.58	□□□□□ -0.24
CTNS-205	ENST00000467663	CRYGN	Q8WXF5	182 aa		13.58	□□□□□ -0.24
CTNS-205	ENST00000467663	PRDM12	Q9H4Q4	367 aa		13.58	□□□□□ -0.24
CTNS-205	ENST00000467663	PKD2L1	Q9P0L9	805 aa		13.58	□□□□□ -0.24
CTNS-205	ENST00000467663	NFASC	O94856	1347 aa		13.58	□□□□□ -0.24
CTNS-205	ENST00000467663	EMSY	Q7Z589	1322 aa		13.58	□□□□□ -0.24
CTNS-205	ENST00000467663	NRCAM	Q92823	1304 aa		13.58	□□□□□ -0.24
CTNS-205	ENST00000467663	ABHD14A-ACY1	A0A1B0GW23	586 aa		13.57	□□□□□ -0.24
CTNS-205	ENST00000467663	RSPH10B2	B2RC85	870 aa		13.57	□□□□□ -0.24
CTNS-205	ENST00000467663	CUTA	O60888	179 aa		13.57	□□□□□ -0.24
CTNS-205	ENST00000467663	EFCAB14	O75071	495 aa		13.57	□□□□□ -0.24
CTNS-205	ENST00000467663	LGR5	O75473	907 aa		13.57	□□□□□ -0.24
CTNS-205	ENST00000467663	CYP3A4	P08684	503 aa		13.57	□□□□□ -0.24
CTNS-205	ENST00000467663	RSPH10B	P0C881	870 aa		13.57	□□□□□ -0.24
CTNS-205	ENST00000467663	AR	P10275	920 aa		13.57	□□□□□ -0.24
CTNS-205	ENST00000467663	TOB1	P50616	345 aa	Predicted RBP	13.57	□□□□□ -0.24
CTNS-205	ENST00000467663	WDR5	P61964	334 aa	Known RBP	13.57	□□□□□ -0.24
CTNS-205	ENST00000467663	ARHGAP4	P98171	946 aa		13.57	□□□□□ -0.24
CTNS-205	ENST00000467663	NIPA1	Q7RTP0	329 aa		13.57	□□□□□ -0.24
CTNS-205	ENST00000467663	PHF6	Q8IWS0	365 aa	Known RBP eCLIP	13.57	□□□□□ -0.24
CTNS-205	ENST00000467663	ZNF579	Q8NAF0	562 aa	Known RBP	13.57	□□□□□ -0.24
CTNS-205	ENST00000467663	LMBR1	Q8WVP7	490 aa		13.57	□□□□□ -0.24
CTNS-205	ENST00000467663	GAS2L1	Q99501	681 aa	Predicted RBP	13.57	□□□□□ -0.24
CTNS-205	ENST00000467663	SMARCAD1	Q9H4L7	1026 aa		13.57	□□□□□ -0.24
CTNS-205	ENST00000467663	AGO4	Q9HCK5	861 aa	Known RBP	13.57	□□□□□ -0.24
CTNS-205	ENST00000467663	JPH1	Q9HDC5	661 aa	Predicted RBP	13.57	□□□□□ -0.24
CTNS-205	ENST00000467663	ERAP1	Q9NZ08	941 aa		13.57	□□□□□ -0.24
CTNS-205	ENST00000467663	SLC9A2	Q9UBY0	812 aa		13.57	□□□□□ -0.24
CTNS-205	ENST00000467663	CLIC4	Q9Y696	253 aa		13.57	□□□□□ -0.24
CTNS-205	ENST00000467663	TRIP12	Q14669	1992 aa	Predicted RBP	13.57	□□□□□ -0.24
CTNS-205	ENST00000467663	TET1	Q8NFU7	2136 aa		13.57	□□□□□ -0.24
CTNS-205	ENST00000467663	ADAMTS3	O15072	1205 aa		13.56	□□□□□ -0.24
CTNS-205	ENST00000467663	CA3	P07451	260 aa		13.56	□□□□□ -0.24
CTNS-205	ENST00000467663	PRPH	P41219	470 aa		13.56	□□□□□ -0.24
CTNS-205	ENST00000467663	KCNJ6	P48051	423 aa		13.56	□□□□□ -0.24
CTNS-205	ENST00000467663	ME1	P48163	572 aa		13.56	□□□□□ -0.24
CTNS-205	ENST00000467663	MKRN4P	Q13434	485 aa	Predicted RBP	13.56	□□□□□ -0.24
CTNS-205	ENST00000467663	IKBKE	Q14164	716 aa		13.56	□□□□□ -0.24
CTNS-205	ENST00000467663	FAM26D	Q5JW98	314 aa		13.56	□□□□□ -0.24
CTNS-205	ENST00000467663	JAKMIP3	Q5VZ66	844 aa		13.56	□□□□□ -0.24
CTNS-205	ENST00000467663	PPP2R2D	Q66LE6	453 aa		13.56	□□□□□ -0.24
CTNS-205	ENST00000467663	PPP4R3A	Q6IN85	833 aa		13.56	□□□□□ -0.24
CTNS-205	ENST00000467663	RPAIN	Q86UA6	219 aa		13.56	□□□□□ -0.24
CTNS-205	ENST00000467663	KRI1	Q8N9T8	703 aa	Known RBP	13.56	□□□□□ -0.24
CTNS-205	ENST00000467663	PCYT2	Q99447	389 aa		13.56	□□□□□ -0.24
CTNS-205	ENST00000467663	SDF4	Q9BRK5	362 aa		13.56	□□□□□ -0.24
CTNS-205	ENST00000467663	GDPD2	Q9HCC8	539 aa		13.56	□□□□□ -0.24
CTNS-205	ENST00000467663	DOCK5	Q9H7D0	1870 aa		13.56	□□□□□ -0.24
CTNS-205	ENST00000467663	IGLV3-22	A0A075B6J6	115 aa		13.55	□□□□□ -0.24
CTNS-205	ENST00000467663	FAM86B1	E9PN63	330 aa		13.55	□□□□□ -0.24
CTNS-205	ENST00000467663	ATG7	O95352	703 aa		13.55	□□□□□ -0.24
CTNS-205	ENST00000467663	FAM86B2	P0C5J1	330 aa		13.55	□□□□□ -0.24
CTNS-205	ENST00000467663	ZNF76	P36508	570 aa		13.55	□□□□□ -0.24
CTNS-205	ENST00000467663	ACTR2	P61160	394 aa		13.55	□□□□□ -0.24
CTNS-205	ENST00000467663	ATP2C1	P98194	919 aa	Predicted RBP	13.55	□□□□□ -0.24
CTNS-205	ENST00000467663	PPFIA1	Q13136	1202 aa		13.55	□□□□□ -0.24
CTNS-205	ENST00000467663	ITGB3BP	Q13352	177 aa	Predicted RBP	13.55	□□□□□ -0.24
CTNS-205	ENST00000467663	ADGRE1	Q14246	886 aa		13.55	□□□□□ -0.24
CTNS-205	ENST00000467663	PLEKHG4	Q58EX7	1191 aa		13.55	□□□□□ -0.24
CTNS-205	ENST00000467663	TAF2	Q6P1X5	1199 aa		13.55	□□□□□ -0.24
CTNS-205	ENST00000467663	DBF4B	Q8NFT6	615 aa		13.55	□□□□□ -0.24
CTNS-205	ENST00000467663	TBCK	Q8TEA7	893 aa		13.55	□□□□□ -0.24
CTNS-205	ENST00000467663	GLG1	Q92896	1179 aa		13.55	□□□□□ -0.24
CTNS-205	ENST00000467663	PYM1	Q9BRP8	204 aa	Known RBP	13.55	□□□□□ -0.24
CTNS-205	ENST00000467663	PCDHB6	Q9Y5E3	794 aa		13.55	□□□□□ -0.24
CTNS-205	ENST00000467663	SRPRB	Q9Y5M8	271 aa	Known RBP	13.55	□□□□□ -0.24
CTNS-205	ENST00000467663	CHD9	Q3L8U1	2897 aa		13.54	□□□□□ -0.24
CTNS-205	ENST00000467663	MBLAC1	A4D2B0	266 aa	Predicted RBP	13.54	□□□□□ -0.24
CTNS-205	ENST00000467663	LETM1	O95202	739 aa	Predicted RBP	13.54	□□□□□ -0.24

Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms