RNA–Protein interactions for RNA: ENST00000467141.1

MSL3-209, Transcript of MSL complex subunit 3, humanhuman

TSL 3

Gene MSL3, Length 599 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSL3-209ENST00000467141 WNK4Q96J92 1243 aa4.7□□□□□ -1.66
MSL3-209ENST00000467141 TRAIPQ9BWF2 469 aa4.7□□□□□ -1.66
MSL3-209ENST00000467141 TMEM39BQ9GZU3 492 aa4.7□□□□□ -1.66
MSL3-209ENST00000467141 COPRSQ9NQ92 184 aa4.7□□□□□ -1.66
MSL3-209ENST00000467141 FAM8A1Q9UBU6 413 aa4.7□□□□□ -1.66
MSL3-209ENST00000467141 U3KQE9 123 aa4.7□□□□□ -1.66
MSL3-209ENST00000467141 MYH4Q9Y623 1939 aa4.7□□□□□ -1.66
MSL3-209ENST00000467141 PNMA6EA0A0J9YXQ4 647 aa4.69□□□□□ -1.66
MSL3-209ENST00000467141 CCDC85CA6NKD9 419 aa4.69□□□□□ -1.66
MSL3-209ENST00000467141 DCDC2CA8MYV0 355 aa4.69□□□□□ -1.66
MSL3-209ENST00000467141 TCP10L2B9ZVM9 353 aa4.69□□□□□ -1.66
MSL3-209ENST00000467141 IGF2BP3O00425 579 aaKnown RBP eCLIP4.69□□□□□ -1.66
MSL3-209ENST00000467141 ENC1O14682 589 aa4.69□□□□□ -1.66
MSL3-209ENST00000467141 SRGAP3O43295 1099 aa4.69□□□□□ -1.66
MSL3-209ENST00000467141 PAGE1O75459 146 aa4.69□□□□□ -1.66
MSL3-209ENST00000467141 FRAT2O75474 233 aaPredicted RBP4.69□□□□□ -1.66
MSL3-209ENST00000467141 LEFTY1O75610 366 aa4.69□□□□□ -1.66
MSL3-209ENST00000467141 TBC1D8O95759 1140 aa4.69□□□□□ -1.66
MSL3-209ENST00000467141 LDHBP07195 334 aaKnown RBP4.69□□□□□ -1.66
MSL3-209ENST00000467141 ZBTB48P10074 688 aaPredicted RBP4.69□□□□□ -1.66
MSL3-209ENST00000467141 SLC5A1P13866 664 aa4.69□□□□□ -1.66
MSL3-209ENST00000467141 PRDX5P30044 214 aa4.69□□□□□ -1.66
MSL3-209ENST00000467141 ADORA1P30542 326 aa4.69□□□□□ -1.66
MSL3-209ENST00000467141 IL15P40933 162 aaPredicted RBP4.69□□□□□ -1.66
MSL3-209ENST00000467141 PHKA1P46020 1223 aa4.69□□□□□ -1.66
MSL3-209ENST00000467141 SREBF2Q12772 1141 aa4.69□□□□□ -1.66
MSL3-209ENST00000467141 TNFAIP1Q13829 316 aa4.69□□□□□ -1.66
MSL3-209ENST00000467141 SUPT20HL1Q3ZLR7 823 aa4.69□□□□□ -1.66
MSL3-209ENST00000467141 PPM1JQ5JR12 505 aa4.69□□□□□ -1.66
MSL3-209ENST00000467141 DIEXFQ68CQ4 756 aaKnown RBP4.69□□□□□ -1.66
MSL3-209ENST00000467141 APOBEC3HQ6NTF7 200 aaKnown RBP4.69□□□□□ -1.66
MSL3-209ENST00000467141 HHIPL2Q6UWX4 724 aa4.69□□□□□ -1.66
MSL3-209ENST00000467141 ATF7IPQ6VMQ6 1270 aa4.69□□□□□ -1.66
MSL3-209ENST00000467141 C12orf40Q86WS4 652 aa4.69□□□□□ -1.66
MSL3-209ENST00000467141 ANKRD13AQ8IZ07 590 aa4.69□□□□□ -1.66
MSL3-209ENST00000467141 TOP6BLQ8N6T0 577 aa4.69□□□□□ -1.66
MSL3-209ENST00000467141 DDX55Q8NHQ9 600 aaKnown RBP eCLIP4.69□□□□□ -1.66
MSL3-209ENST00000467141 FEZF2Q8TBJ5 459 aa4.69□□□□□ -1.66
MSL3-209ENST00000467141 ZNF296Q8WUU4 475 aaPredicted RBP4.69□□□□□ -1.66
MSL3-209ENST00000467141 TEKT1Q969V4 418 aa4.69□□□□□ -1.66
MSL3-209ENST00000467141 ZDHHC15Q96MV8 337 aa4.69□□□□□ -1.66
MSL3-209ENST00000467141 DUSP23Q9BVJ7 150 aa4.69□□□□□ -1.66
MSL3-209ENST00000467141 R3HDMLQ9H3Y0 253 aa4.69□□□□□ -1.66
MSL3-209ENST00000467141 C12orf49Q9H741 205 aa4.69□□□□□ -1.66
MSL3-209ENST00000467141 PCDHA4Q9UN74 947 aa4.69□□□□□ -1.66
MSL3-209ENST00000467141 RLFQ13129 1914 aa4.69□□□□□ -1.66
MSL3-209ENST00000467141 ZNFX1Q9P2E3 1918 aaKnown RBP4.69□□□□□ -1.66
MSL3-209ENST00000467141 MAST3O60307 1309 aa4.69□□□□□ -1.66
MSL3-209ENST00000467141 SALL1Q9NSC2 1324 aa4.69□□□□□ -1.66
MSL3-209ENST00000467141 PLXNA1Q9UIW2 1896 aa4.69□□□□□ -1.66
MSL3-209ENST00000467141 ATRNL1Q5VV63 1379 aa4.68□□□□□ -1.66
MSL3-209ENST00000467141 GREB1LQ9C091 1923 aaPredicted RBP4.68□□□□□ -1.66
MSL3-209ENST00000467141 KIAA0100Q14667 2235 aaKnown RBP4.68□□□□□ -1.66
MSL3-209ENST00000467141 A0A1B0GUL7 405 aa4.68□□□□□ -1.66
MSL3-209ENST00000467141 MANSC4A6NHS7 340 aaPredicted RBP4.68□□□□□ -1.66
MSL3-209ENST00000467141 UNCXA6NJT0 531 aa4.68□□□□□ -1.66
MSL3-209ENST00000467141 P4HBP07237 508 aaKnown RBP4.68□□□□□ -1.66
MSL3-209ENST00000467141 GNAI3P08754 354 aa4.68□□□□□ -1.66
MSL3-209ENST00000467141 USP17L7P0C7H9 530 aa4.68□□□□□ -1.66
MSL3-209ENST00000467141 RLBP1P12271 317 aa4.68□□□□□ -1.66
MSL3-209ENST00000467141 TNNI2P48788 182 aa4.68□□□□□ -1.66
MSL3-209ENST00000467141 TIMM10P62072 90 aa4.68□□□□□ -1.66
MSL3-209ENST00000467141 TFCP2Q12800 502 aa4.68□□□□□ -1.66
MSL3-209ENST00000467141 RASGRF1Q13972 1273 aa4.68□□□□□ -1.66
MSL3-209ENST00000467141 VGLL4Q14135 290 aa4.68□□□□□ -1.66
MSL3-209ENST00000467141 FKBP1CQ5VVH2 108 aa4.68□□□□□ -1.66
MSL3-209ENST00000467141 CTU1Q7Z7A3 348 aaKnown RBP4.68□□□□□ -1.66
MSL3-209ENST00000467141 FAM83AQ86UY5 434 aa4.68□□□□□ -1.66
MSL3-209ENST00000467141 TMEM57Q8N5G2 664 aa4.68□□□□□ -1.66
MSL3-209ENST00000467141 WDR66Q8TBY9 1149 aa4.68□□□□□ -1.66
MSL3-209ENST00000467141 ZNF384Q8TF68 577 aa4.68□□□□□ -1.66
MSL3-209ENST00000467141 FRAT1Q92837 279 aaPredicted RBP4.68□□□□□ -1.66
MSL3-209ENST00000467141 ELMO3Q96BJ8 720 aa4.68□□□□□ -1.66
MSL3-209ENST00000467141 OPTNQ96CV9 577 aa4.68□□□□□ -1.66
MSL3-209ENST00000467141 FRMD6Q96NE9 622 aa4.68□□□□□ -1.66
MSL3-209ENST00000467141 PALD1Q9ULE6 856 aa4.68□□□□□ -1.66
MSL3-209ENST00000467141 CYP8B1Q9UNU6 501 aa4.68□□□□□ -1.66
MSL3-209ENST00000467141 SUGT1Q9Y2Z0 365 aa4.68□□□□□ -1.66
MSL3-209ENST00000467141 SNCAIPQ9Y6H5 919 aa4.68□□□□□ -1.66
MSL3-209ENST00000467141 A0A0G2JMZ2 1700 aa4.68□□□□□ -1.66
MSL3-209ENST00000467141 GAKO14976 1311 aa4.68□□□□□ -1.66
MSL3-209ENST00000467141 PDS5AQ29RF7 1337 aaKnown RBP4.68□□□□□ -1.66
MSL3-209ENST00000467141 ZBED9Q6R2W3 1325 aa4.68□□□□□ -1.66
MSL3-209ENST00000467141 COL2A1P02458 1487 aaPredicted RBP4.68□□□□□ -1.66
MSL3-209ENST00000467141 IPO8O15397 1037 aaKnown RBP4.67□□□□□ -1.66
MSL3-209ENST00000467141 GNAI2P04899 355 aa4.67□□□□□ -1.66
MSL3-209ENST00000467141 CELA3AP09093 270 aa4.67□□□□□ -1.66
MSL3-209ENST00000467141 CAP1Q01518 475 aa4.67□□□□□ -1.66
MSL3-209ENST00000467141 ZKSCAN2Q63HK3 967 aa4.67□□□□□ -1.66
MSL3-209ENST00000467141 PCNX4Q63HM2 1172 aa4.67□□□□□ -1.66
MSL3-209ENST00000467141 CDC42EP5Q6NZY7 148 aa4.67□□□□□ -1.66
MSL3-209ENST00000467141 ZKSCAN4Q969J2 545 aaPredicted RBP4.67□□□□□ -1.66
MSL3-209ENST00000467141 PTPN18Q99952 460 aa4.67□□□□□ -1.66
MSL3-209ENST00000467141 BDH2Q9BUT1 245 aa4.67□□□□□ -1.66
MSL3-209ENST00000467141 SCAND2PQ9GZW5 306 aaPredicted RBP4.67□□□□□ -1.66
MSL3-209ENST00000467141 TMOD2Q9NZR1 351 aa4.67□□□□□ -1.66
MSL3-209ENST00000467141 DENND2AQ9ULE3 1009 aa4.67□□□□□ -1.66
MSL3-209ENST00000467141 CNOT6Q9ULM6 557 aaKnown RBP4.67□□□□□ -1.66
MSL3-209ENST00000467141 HDAC5Q9UQL6 1122 aa4.67□□□□□ -1.66
MSL3-209ENST00000467141 CCL15-CCL14A0A0B4J2E2 113 aa4.66□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms