RNA–Protein interactions for RNA: ENST00000466438.1

HMGXB4-206, Transcript of HMG-box containing 4, humanhuman

TSL 3

Gene HMGXB4, Length 575 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-206ENST00000466438 SDHBP21912 280 aa17.07■□□□□ 0.32
HMGXB4-206ENST00000466438 CCND2P30279 289 aa17.07■□□□□ 0.32
HMGXB4-206ENST00000466438 COLGALT1Q8NBJ5 622 aa17.07■□□□□ 0.32
HMGXB4-206ENST00000466438 DNAJB3Q8WWF6 145 aa17.07■□□□□ 0.32
HMGXB4-206ENST00000466438 CCDC136Q96JN2 1154 aa17.07■□□□□ 0.32
HMGXB4-206ENST00000466438 TCF25Q9BQ70 676 aa17.07■□□□□ 0.32
HMGXB4-206ENST00000466438 NGRNQ9NPE2 291 aaKnown RBP17.07■□□□□ 0.32
HMGXB4-206ENST00000466438 ENTPD7Q9NQZ7 604 aa17.07■□□□□ 0.32
HMGXB4-206ENST00000466438 USTQ9Y2C2 406 aa17.07■□□□□ 0.32
HMGXB4-206ENST00000466438 KAT6AQ92794 2004 aa17.07■□□□□ 0.32
HMGXB4-206ENST00000466438 MYH6P13533 1939 aa17.06■□□□□ 0.32
HMGXB4-206ENST00000466438 HIDE1A8MVS5 230 aa17.06■□□□□ 0.32
HMGXB4-206ENST00000466438 RPLP2P05387 115 aaKnown RBP17.06■□□□□ 0.32
HMGXB4-206ENST00000466438 MRPS6P82932 125 aaKnown RBP17.06■□□□□ 0.32
HMGXB4-206ENST00000466438 APOBRQ0VD83 1088 aa17.06■□□□□ 0.32
HMGXB4-206ENST00000466438 NEDD9Q14511 834 aa17.06■□□□□ 0.32
HMGXB4-206ENST00000466438 UTP14CQ5TAP6 766 aaKnown RBP17.06■□□□□ 0.32
HMGXB4-206ENST00000466438 CYFIP1Q7L576 1253 aa17.06■□□□□ 0.32
HMGXB4-206ENST00000466438 DCLK2Q8N568 766 aa17.06■□□□□ 0.32
HMGXB4-206ENST00000466438 MRPS27Q92552 414 aaKnown RBP17.06■□□□□ 0.32
HMGXB4-206ENST00000466438 ERVK-5Q9HDB9 667 aa17.06■□□□□ 0.32
HMGXB4-206ENST00000466438 ZBTB40Q9NUA8 1239 aa17.06■□□□□ 0.32
HMGXB4-206ENST00000466438 PUF60Q9UHX1 559 aaKnown RBP17.06■□□□□ 0.32
HMGXB4-206ENST00000466438 TUBE1Q9UJT0 475 aa17.06■□□□□ 0.32
HMGXB4-206ENST00000466438 USP24Q9UPU5 2620 aa17.06■□□□□ 0.32
HMGXB4-206ENST00000466438 MBLAC1A4D2B0 266 aaPredicted RBP17.05■□□□□ 0.32
HMGXB4-206ENST00000466438 PLCB3Q01970 1234 aa17.05■□□□□ 0.32
HMGXB4-206ENST00000466438 CACNB1Q02641 598 aaPredicted RBP17.05■□□□□ 0.32
HMGXB4-206ENST00000466438 PPFIA1Q13136 1202 aa17.05■□□□□ 0.32
HMGXB4-206ENST00000466438 GNPTABQ3T906 1256 aa17.05■□□□□ 0.32
HMGXB4-206ENST00000466438 KIAA0319Q5VV43 1072 aa17.05■□□□□ 0.32
HMGXB4-206ENST00000466438 SIX5Q8N196 739 aa17.05■□□□□ 0.32
HMGXB4-206ENST00000466438 ZFP91Q96JP5 570 aaPredicted RBP17.05■□□□□ 0.32
HMGXB4-206ENST00000466438 FBXL21Q9UKT6 434 aa17.05■□□□□ 0.32
HMGXB4-206ENST00000466438 PADI3Q9ULW8 664 aa17.05■□□□□ 0.32
HMGXB4-206ENST00000466438 HCFC2Q9Y5Z7 792 aa17.05■□□□□ 0.32
HMGXB4-206ENST00000466438 FNDC1Q4ZHG4 1894 aaPredicted RBP17.05■□□□□ 0.32
HMGXB4-206ENST00000466438 ATRXP46100 2492 aa17.04■□□□□ 0.32
HMGXB4-206ENST00000466438 SARSP49591 514 aaKnown RBP17.04■□□□□ 0.32
HMGXB4-206ENST00000466438 PAK2Q13177 524 aa17.04■□□□□ 0.32
HMGXB4-206ENST00000466438 TDGQ13569 410 aa17.04■□□□□ 0.32
HMGXB4-206ENST00000466438 VPS53Q5VIR6 699 aa17.04■□□□□ 0.32
HMGXB4-206ENST00000466438 IER5Q5VY09 327 aa17.04■□□□□ 0.32
HMGXB4-206ENST00000466438 KIAA1841Q6NSI8 718 aa17.04■□□□□ 0.32
HMGXB4-206ENST00000466438 SAMD3Q8N6K7 520 aa17.04■□□□□ 0.32
HMGXB4-206ENST00000466438 CYP26B1Q9NR63 512 aa17.04■□□□□ 0.32
HMGXB4-206ENST00000466438 DBR1Q9UK59 544 aaKnown RBP17.04■□□□□ 0.32
HMGXB4-206ENST00000466438 DUSP12Q9UNI6 340 aa17.04■□□□□ 0.32
HMGXB4-206ENST00000466438 PCDHB7Q9Y5E2 793 aa17.04■□□□□ 0.32
HMGXB4-206ENST00000466438 IGSF9BQ9UPX0 1349 aa17.03■□□□□ 0.32
HMGXB4-206ENST00000466438 TBKBP1A7MCY6 615 aa17.03■□□□□ 0.32
HMGXB4-206ENST00000466438 DHX16O60231 1041 aaKnown RBP17.03■□□□□ 0.32
HMGXB4-206ENST00000466438 EOMESO95936 686 aa17.03■□□□□ 0.32
HMGXB4-206ENST00000466438 LAG3P18627 525 aa17.03■□□□□ 0.32
HMGXB4-206ENST00000466438 HOXA13P31271 388 aaPredicted RBP17.03■□□□□ 0.32
HMGXB4-206ENST00000466438 ALX1Q15699 326 aa17.03■□□□□ 0.32
HMGXB4-206ENST00000466438 GRIK4Q16099 956 aa17.03■□□□□ 0.32
HMGXB4-206ENST00000466438 ASPRV1Q53RT3 343 aa17.03■□□□□ 0.32
HMGXB4-206ENST00000466438 RIN2Q8WYP3 895 aaPredicted RBP17.03■□□□□ 0.32
HMGXB4-206ENST00000466438 AMNQ9BXJ7 453 aa17.03■□□□□ 0.32
HMGXB4-206ENST00000466438 JMJD4Q9H9V9 463 aa17.03■□□□□ 0.32
HMGXB4-206ENST00000466438 TYW1Q9NV66 732 aaKnown RBP17.03■□□□□ 0.32
HMGXB4-206ENST00000466438 HCSTQ9UBK5 93 aa17.03■□□□□ 0.32
HMGXB4-206ENST00000466438 FANCMQ8IYD8 2048 aa17.03■□□□□ 0.32
HMGXB4-206ENST00000466438 DOCK5Q9H7D0 1870 aa17.02■□□□□ 0.32
HMGXB4-206ENST00000466438 SPATA31C2B4DYI2 1134 aa17.02■□□□□ 0.32
HMGXB4-206ENST00000466438 WEE2P0C1S8 567 aa17.02■□□□□ 0.32
HMGXB4-206ENST00000466438 ATXN1P54253 815 aaKnown RBP17.02■□□□□ 0.32
HMGXB4-206ENST00000466438 ATAT1Q5SQI0 421 aa17.02■□□□□ 0.32
HMGXB4-206ENST00000466438 MARCH8Q5T0T0 291 aa17.02■□□□□ 0.32
HMGXB4-206ENST00000466438 PNMA1Q8ND90 353 aa17.02■□□□□ 0.32
HMGXB4-206ENST00000466438 INPP4AQ96PE3 977 aaPredicted RBP17.02■□□□□ 0.32
HMGXB4-206ENST00000466438 TMX1Q9H3N1 280 aa17.02■□□□□ 0.32
HMGXB4-206ENST00000466438 TELO2Q9Y4R8 837 aa17.02■□□□□ 0.32
HMGXB4-206ENST00000466438 TRPV2Q9Y5S1 764 aa17.02■□□□□ 0.32
HMGXB4-206ENST00000466438 M0QZ92 97 aa17.01■□□□□ 0.31
HMGXB4-206ENST00000466438 FIBPO43427 364 aa17.01■□□□□ 0.31
HMGXB4-206ENST00000466438 STAM2O75886 525 aa17.01■□□□□ 0.31
HMGXB4-206ENST00000466438 IBSPP21815 317 aaPredicted RBP17.01■□□□□ 0.31
HMGXB4-206ENST00000466438 SEMA3FQ13275 785 aa17.01■□□□□ 0.31
HMGXB4-206ENST00000466438 RARS2Q5T160 578 aaKnown RBP17.01■□□□□ 0.31
HMGXB4-206ENST00000466438 FAM43BQ6ZT52 329 aaPredicted RBP17.01■□□□□ 0.31
HMGXB4-206ENST00000466438 TMC7Q7Z402 723 aa17.01■□□□□ 0.31
HMGXB4-206ENST00000466438 DGKHQ86XP1 1220 aa17.01■□□□□ 0.31
HMGXB4-206ENST00000466438 SUMF1Q8NBK3 374 aa17.01■□□□□ 0.31
HMGXB4-206ENST00000466438 FAM49AQ9H0Q0 323 aaPredicted RBP17.01■□□□□ 0.31
HMGXB4-206ENST00000466438 CWH43Q9H720 699 aa17.01■□□□□ 0.31
HMGXB4-206ENST00000466438 VAT1LQ9HCJ6 419 aa17.01■□□□□ 0.31
HMGXB4-206ENST00000466438 PCDHA1Q9Y5I3 950 aa17.01■□□□□ 0.31
HMGXB4-206ENST00000466438 STK25O00506 426 aa17■□□□□ 0.31
HMGXB4-206ENST00000466438 SP9P0CG40 484 aa17■□□□□ 0.31
HMGXB4-206ENST00000466438 PCP11498 1178 aaKnown RBP17■□□□□ 0.31
HMGXB4-206ENST00000466438 SP4Q02446 784 aa17■□□□□ 0.31
HMGXB4-206ENST00000466438 COL9A2Q14055 689 aaPredicted RBP17■□□□□ 0.31
HMGXB4-206ENST00000466438 FAM102BQ5T8I3 360 aa17■□□□□ 0.31
HMGXB4-206ENST00000466438 B4GALNT3Q6L9W6 998 aa17■□□□□ 0.31
HMGXB4-206ENST00000466438 XRRA1Q6P2D8 792 aa17■□□□□ 0.31
HMGXB4-206ENST00000466438 DENND4AQ7Z401 1863 aa17■□□□□ 0.31
HMGXB4-206ENST00000466438 GPR161Q8N6U8 529 aaKnown RBP17■□□□□ 0.31
HMGXB4-206ENST00000466438 ACSF2Q96CM8 615 aaPredicted RBP17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms