RNA–Protein interactions for RNA: ENST00000466100.1

VCP-204, Transcript of valosin containing protein, humanhuman

TSL 2

Gene VCP, Length 508 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-204ENST00000466100 ACTN4O43707 911 aaKnown RBP12.47□□□□□ -0.41
VCP-204ENST00000466100 NR1I2O75469 434 aa12.47□□□□□ -0.41
VCP-204ENST00000466100 MYCP01106 439 aaPredicted RBP12.47□□□□□ -0.41
VCP-204ENST00000466100 FAM160A1Q05DH4 1040 aa12.47□□□□□ -0.41
VCP-204ENST00000466100 NFKBIBQ15653 356 aa12.47□□□□□ -0.41
VCP-204ENST00000466100 GNASQ5JWF2 1037 aa12.47□□□□□ -0.41
VCP-204ENST00000466100 PDXDC2PQ6P474 469 aa12.47□□□□□ -0.41
VCP-204ENST00000466100 ANO5Q75V66 913 aa12.47□□□□□ -0.41
VCP-204ENST00000466100 TPH2Q8IWU9 490 aa12.47□□□□□ -0.41
VCP-204ENST00000466100 KCTD17Q8N5Z5 321 aa12.47□□□□□ -0.41
VCP-204ENST00000466100 PDILTQ8N807 584 aa12.47□□□□□ -0.41
VCP-204ENST00000466100 CALML4Q96GE6 196 aa12.47□□□□□ -0.41
VCP-204ENST00000466100 DEFB118Q96PH6 123 aa12.47□□□□□ -0.41
VCP-204ENST00000466100 CEP89Q96ST8 783 aa12.47□□□□□ -0.41
VCP-204ENST00000466100 PLIN2Q99541 437 aa12.47□□□□□ -0.41
VCP-204ENST00000466100 KIAA1024Q9UPX6 916 aa12.47□□□□□ -0.41
VCP-204ENST00000466100 A0A087WWV3 80 aa12.46□□□□□ -0.41
VCP-204ENST00000466100 TMEM150BA6NC51 233 aa12.46□□□□□ -0.41
VCP-204ENST00000466100 KPNA6O60684 536 aa12.46□□□□□ -0.41
VCP-204ENST00000466100 OATP04181 439 aa12.46□□□□□ -0.41
VCP-204ENST00000466100 GJB1P08034 283 aa12.46□□□□□ -0.41
VCP-204ENST00000466100 SYKP43405 635 aa12.46□□□□□ -0.41
VCP-204ENST00000466100 MNX1P50219 401 aaPredicted RBP12.46□□□□□ -0.41
VCP-204ENST00000466100 SLC26A2P50443 739 aa12.46□□□□□ -0.41
VCP-204ENST00000466100 PLCB4Q15147 1175 aa12.46□□□□□ -0.41
VCP-204ENST00000466100 KCNA10Q16322 511 aa12.46□□□□□ -0.41
VCP-204ENST00000466100 TPRNQ4KMQ1 711 aa12.46□□□□□ -0.41
VCP-204ENST00000466100 BRDTQ58F21 947 aaPredicted RBP12.46□□□□□ -0.41
VCP-204ENST00000466100 CCDC73Q6ZRK6 1079 aa12.46□□□□□ -0.41
VCP-204ENST00000466100 RNF180Q86T96 592 aa12.46□□□□□ -0.41
VCP-204ENST00000466100 ATP8B4Q8TF62 1192 aa12.46□□□□□ -0.41
VCP-204ENST00000466100 RAD54LQ92698 747 aa12.46□□□□□ -0.41
VCP-204ENST00000466100 GLG1Q92896 1179 aa12.46□□□□□ -0.41
VCP-204ENST00000466100 NACC1Q96RE7 527 aa12.46□□□□□ -0.41
VCP-204ENST00000466100 TSEN34Q9BSV6 310 aaKnown RBP12.46□□□□□ -0.41
VCP-204ENST00000466100 PANK2Q9BZ23 570 aa12.46□□□□□ -0.41
VCP-204ENST00000466100 AZI2Q9H6S1 392 aa12.46□□□□□ -0.41
VCP-204ENST00000466100 ERAP1Q9NZ08 941 aa12.46□□□□□ -0.41
VCP-204ENST00000466100 STK17AQ9UEE5 414 aa12.46□□□□□ -0.41
VCP-204ENST00000466100 CCDC39Q9UFE4 941 aa12.46□□□□□ -0.41
VCP-204ENST00000466100 DBR1Q9UK59 544 aaKnown RBP12.46□□□□□ -0.41
VCP-204ENST00000466100 ZBTB42B2RXF5 422 aa12.45□□□□□ -0.42
VCP-204ENST00000466100 E9PMD0 336 aa12.45□□□□□ -0.42
VCP-204ENST00000466100 H3BRB1 525 aa12.45□□□□□ -0.42
VCP-204ENST00000466100 DKC1O60832 514 aaKnown RBP eCLIP12.45□□□□□ -0.42
VCP-204ENST00000466100 ZNF202O95125 648 aa12.45□□□□□ -0.42
VCP-204ENST00000466100 EYA4O95677 639 aa12.45□□□□□ -0.42
VCP-204ENST00000466100 ASGR1P07306 291 aa12.45□□□□□ -0.42
VCP-204ENST00000466100 MYL3P08590 195 aa12.45□□□□□ -0.42
VCP-204ENST00000466100 XRCC6P12956 609 aaKnown RBP eCLIP12.45□□□□□ -0.42
VCP-204ENST00000466100 MARK3P27448 753 aa12.45□□□□□ -0.42
VCP-204ENST00000466100 HOXC8P31273 242 aa12.45□□□□□ -0.42
VCP-204ENST00000466100 YWHABP31946 246 aaKnown RBP12.45□□□□□ -0.42
VCP-204ENST00000466100 STAT6P42226 847 aa12.45□□□□□ -0.42
VCP-204ENST00000466100 GJA8P48165 433 aa12.45□□□□□ -0.42
VCP-204ENST00000466100 RARRES1P49788 294 aa12.45□□□□□ -0.42
VCP-204ENST00000466100 SLC12A3P55017 1021 aa12.45□□□□□ -0.42
VCP-204ENST00000466100 TARBP2Q15633 366 aaKnown RBP12.45□□□□□ -0.42
VCP-204ENST00000466100 ZRSR1Q15695 479 aaKnown RBP12.45□□□□□ -0.42
VCP-204ENST00000466100 LONRF3Q496Y0 759 aa12.45□□□□□ -0.42
VCP-204ENST00000466100 XKR3Q5GH77 459 aa12.45□□□□□ -0.42
VCP-204ENST00000466100 RRAGBQ5VZM2 374 aa12.45□□□□□ -0.42
VCP-204ENST00000466100 CXCL17Q6UXB2 119 aa12.45□□□□□ -0.42
VCP-204ENST00000466100 SH3RF1Q7Z6J0 888 aa12.45□□□□□ -0.42
VCP-204ENST00000466100 IQUBQ8NA54 791 aa12.45□□□□□ -0.42
VCP-204ENST00000466100 PCSK9Q8NBP7 692 aaKnown RBP12.45□□□□□ -0.42
VCP-204ENST00000466100 ARRDC4Q8NCT1 418 aa12.45□□□□□ -0.42
VCP-204ENST00000466100 PIGOQ8TEQ8 1089 aa12.45□□□□□ -0.42
VCP-204ENST00000466100 U2AF1L4Q8WU68 220 aaKnown RBP12.45□□□□□ -0.42
VCP-204ENST00000466100 BBXQ8WY36 941 aaPredicted RBP12.45□□□□□ -0.42
VCP-204ENST00000466100 DHX58Q96C10 678 aa12.45□□□□□ -0.42
VCP-204ENST00000466100 CDK5RAP3Q96JB5 506 aa12.45□□□□□ -0.42
VCP-204ENST00000466100 FAM167AQ96KS9 214 aa12.45□□□□□ -0.42
VCP-204ENST00000466100 MTRQ99707 1265 aa12.45□□□□□ -0.42
VCP-204ENST00000466100 PYM1Q9BRP8 204 aaKnown RBP12.45□□□□□ -0.42
VCP-204ENST00000466100 MTG1Q9BT17 334 aaPredicted RBP12.45□□□□□ -0.42
VCP-204ENST00000466100 NIFKQ9BYG3 293 aaKnown RBP12.45□□□□□ -0.42
VCP-204ENST00000466100 CUEDC2Q9H467 287 aa12.45□□□□□ -0.42
VCP-204ENST00000466100 RNPEPQ9H4A4 650 aa12.45□□□□□ -0.42
VCP-204ENST00000466100 TUT1Q9H6E5 874 aaKnown RBP12.45□□□□□ -0.42
VCP-204ENST00000466100 ANKEF1Q9NU02 776 aa12.45□□□□□ -0.42
VCP-204ENST00000466100 KBTBD4Q9NVX7 518 aa12.45□□□□□ -0.42
VCP-204ENST00000466100 USP25Q9UHP3 1055 aa12.45□□□□□ -0.42
VCP-204ENST00000466100 ZNF215Q9UL58 517 aaPredicted RBP12.45□□□□□ -0.42
VCP-204ENST00000466100 PHF24Q9UPV7 400 aa12.45□□□□□ -0.42
VCP-204ENST00000466100 GRIN2DO15399 1336 aa12.44□□□□□ -0.42
VCP-204ENST00000466100 MOXD2PA6NHM9 499 aa12.44□□□□□ -0.42
VCP-204ENST00000466100 DNM1LO00429 736 aa12.44□□□□□ -0.42
VCP-204ENST00000466100 ZEB2O60315 1214 aa12.44□□□□□ -0.42
VCP-204ENST00000466100 SGPL1O95470 568 aa12.44□□□□□ -0.42
VCP-204ENST00000466100 MBD3O95983 291 aa12.44□□□□□ -0.42
VCP-204ENST00000466100 SLFN14P0C7P3 912 aa12.44□□□□□ -0.42
VCP-204ENST00000466100 PTMSP20962 102 aa12.44□□□□□ -0.42
VCP-204ENST00000466100 PSEN2P49810 448 aa12.44□□□□□ -0.42
VCP-204ENST00000466100 ACLYP53396 1101 aa12.44□□□□□ -0.42
VCP-204ENST00000466100 NPEPPSP55786 919 aa12.44□□□□□ -0.42
VCP-204ENST00000466100 MCM6Q14566 821 aa12.44□□□□□ -0.42
VCP-204ENST00000466100 MFSD10Q14728 455 aa12.44□□□□□ -0.42
VCP-204ENST00000466100 PLA2G4FQ68DD2 849 aa12.44□□□□□ -0.42
VCP-204ENST00000466100 KRBA2Q6ZNG9 492 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms