RNA–Protein interactions for RNA: ENST00000466054.1

LRCH3-211, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 2

Gene LRCH3, Length 683 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-211ENST00000466054 MAKP20794 623 aa6.27□□□□□ -1.41
LRCH3-211ENST00000466054 ATXN1P54253 815 aaKnown RBP6.27□□□□□ -1.41
LRCH3-211ENST00000466054 NTRK3Q16288 839 aa6.27□□□□□ -1.41
LRCH3-211ENST00000466054 KRTAP15-1Q3LI76 137 aa6.27□□□□□ -1.41
LRCH3-211ENST00000466054 FNDC3BQ53EP0 1204 aaKnown RBP6.27□□□□□ -1.41
LRCH3-211ENST00000466054 TRIM61Q5EBN2 209 aa6.27□□□□□ -1.41
LRCH3-211ENST00000466054 PHF19Q5T6S3 580 aa6.27□□□□□ -1.41
LRCH3-211ENST00000466054 USP53Q70EK8 1073 aa6.27□□□□□ -1.41
LRCH3-211ENST00000466054 POLNQ7Z5Q5 900 aa6.27□□□□□ -1.41
LRCH3-211ENST00000466054 NCOA5Q9HCD5 579 aaKnown RBP6.27□□□□□ -1.41
LRCH3-211ENST00000466054 DLL4Q9NR61 685 aa6.27□□□□□ -1.41
LRCH3-211ENST00000466054 AQP7O14520 342 aa6.26□□□□□ -1.41
LRCH3-211ENST00000466054 KCNQ2O43526 872 aa6.26□□□□□ -1.41
LRCH3-211ENST00000466054 RFPL3O75679 317 aa6.26□□□□□ -1.41
LRCH3-211ENST00000466054 RAD17O75943 681 aa6.26□□□□□ -1.41
LRCH3-211ENST00000466054 CHGBP05060 677 aa6.26□□□□□ -1.41
LRCH3-211ENST00000466054 NAT1P18440 290 aa6.26□□□□□ -1.41
LRCH3-211ENST00000466054 CSF2RBP32927 897 aa6.26□□□□□ -1.41
LRCH3-211ENST00000466054 TUBA3CQ13748 450 aa6.26□□□□□ -1.41
LRCH3-211ENST00000466054 USP10Q14694 798 aaKnown RBP6.26□□□□□ -1.41
LRCH3-211ENST00000466054 TUBA3EQ6PEY2 450 aa6.26□□□□□ -1.41
LRCH3-211ENST00000466054 NLRP10Q86W26 655 aa6.26□□□□□ -1.41
LRCH3-211ENST00000466054 CCDC103Q8IW40 242 aa6.26□□□□□ -1.41
LRCH3-211ENST00000466054 Q8N1Y9 231 aa6.26□□□□□ -1.41
LRCH3-211ENST00000466054 ZNF483Q8TF39 744 aaPredicted RBP6.26□□□□□ -1.41
LRCH3-211ENST00000466054 AJUBAQ96IF1 538 aa6.26□□□□□ -1.41
LRCH3-211ENST00000466054 FEZ1Q99689 392 aa6.26□□□□□ -1.41
LRCH3-211ENST00000466054 MMRN2Q9H8L6 949 aa6.26□□□□□ -1.41
LRCH3-211ENST00000466054 REXO2Q9Y3B8 237 aaKnown RBP6.26□□□□□ -1.41
LRCH3-211ENST00000466054 ARNTLO00327 626 aa6.25□□□□□ -1.41
LRCH3-211ENST00000466054 ASMTLO95671 621 aa6.25□□□□□ -1.41
LRCH3-211ENST00000466054 COL6A1P12109 1028 aa6.25□□□□□ -1.41
LRCH3-211ENST00000466054 CANXP27824 592 aaKnown RBP6.25□□□□□ -1.41
LRCH3-211ENST00000466054 GPR85P60893 370 aa6.25□□□□□ -1.41
LRCH3-211ENST00000466054 TAF7LQ5H9L4 462 aa6.25□□□□□ -1.41
LRCH3-211ENST00000466054 KIAA0907Q7Z7F0 614 aaPredicted RBP6.25□□□□□ -1.41
LRCH3-211ENST00000466054 REXO1L1PQ8IX06 675 aa6.25□□□□□ -1.41
LRCH3-211ENST00000466054 IFNL3Q8IZI9 196 aa6.25□□□□□ -1.41
LRCH3-211ENST00000466054 RCBTB1Q8NDN9 531 aa6.25□□□□□ -1.41
LRCH3-211ENST00000466054 PHOSPHO1Q8TCT1 267 aa6.25□□□□□ -1.41
LRCH3-211ENST00000466054 OR14A2Q96R54 314 aa6.25□□□□□ -1.41
LRCH3-211ENST00000466054 PHF20Q9BVI0 1012 aa6.25□□□□□ -1.41
LRCH3-211ENST00000466054 RBPJLQ9UBG7 517 aa6.25□□□□□ -1.41
LRCH3-211ENST00000466054 H7BY64 318 aa6.24□□□□□ -1.41
LRCH3-211ENST00000466054 RAMP2O60895 175 aa6.24□□□□□ -1.41
LRCH3-211ENST00000466054 HNRNPA0Q13151 305 aaKnown RBP6.24□□□□□ -1.41
LRCH3-211ENST00000466054 CSRP2Q16527 193 aa6.24□□□□□ -1.41
LRCH3-211ENST00000466054 LDLRAD3Q86YD5 345 aa6.24□□□□□ -1.41
LRCH3-211ENST00000466054 TRIM48Q8IWZ4 208 aa6.24□□□□□ -1.41
LRCH3-211ENST00000466054 GSTCDQ8NEC7 633 aa6.24□□□□□ -1.41
LRCH3-211ENST00000466054 PUM2Q8TB72 1066 aaKnown RBP eCLIP6.24□□□□□ -1.41
LRCH3-211ENST00000466054 EPB41L1Q9H4G0 881 aa6.24□□□□□ -1.41
LRCH3-211ENST00000466054 CLDND1Q9NY35 253 aa6.24□□□□□ -1.41
LRCH3-211ENST00000466054 SFMBT1Q9UHJ3 866 aa6.24□□□□□ -1.41
LRCH3-211ENST00000466054 BLACEA4D250 179 aa6.23□□□□□ -1.41
LRCH3-211ENST00000466054 KRIT1O00522 736 aa6.23□□□□□ -1.41
LRCH3-211ENST00000466054 TADA3O75528 432 aa6.23□□□□□ -1.41
LRCH3-211ENST00000466054 APPP05067 770 aa6.23□□□□□ -1.41
LRCH3-211ENST00000466054 ACRV1P26436 265 aa6.23□□□□□ -1.41
LRCH3-211ENST00000466054 GLRBP48167 497 aa6.23□□□□□ -1.41
LRCH3-211ENST00000466054 LSAMPQ13449 338 aa6.23□□□□□ -1.41
LRCH3-211ENST00000466054 EMC4Q5J8M3 183 aa6.23□□□□□ -1.41
LRCH3-211ENST00000466054 EGFLAMQ63HQ2 1017 aa6.23□□□□□ -1.41
LRCH3-211ENST00000466054 DTX3Q8N9I9 347 aa6.23□□□□□ -1.41
LRCH3-211ENST00000466054 CACTINQ8WUQ7 758 aaKnown RBP6.23□□□□□ -1.41
LRCH3-211ENST00000466054 VOPP1Q96AW1 172 aa6.23□□□□□ -1.41
LRCH3-211ENST00000466054 SMOC1Q9H4F8 434 aa6.23□□□□□ -1.41
LRCH3-211ENST00000466054 ZFP69BQ9UJL9 534 aa6.23□□□□□ -1.41
LRCH3-211ENST00000466054 PLAAQ9Y263 795 aa6.23□□□□□ -1.41
LRCH3-211ENST00000466054 PCDHA2Q9Y5H9 948 aa6.23□□□□□ -1.41
LRCH3-211ENST00000466054 LOC105371045A0A1W2PR82 267 aa6.22□□□□□ -1.41
LRCH3-211ENST00000466054 H0Y858 1186 aa6.22□□□□□ -1.41
LRCH3-211ENST00000466054 PPP1R12AO14974 1030 aaPredicted RBP6.22□□□□□ -1.41
LRCH3-211ENST00000466054 CDC14BO60729 498 aa6.22□□□□□ -1.41
LRCH3-211ENST00000466054 KNG1P01042 644 aa6.22□□□□□ -1.41
LRCH3-211ENST00000466054 LCP1P13796 627 aa6.22□□□□□ -1.41
LRCH3-211ENST00000466054 CR2P20023 1033 aa6.22□□□□□ -1.41
LRCH3-211ENST00000466054 KIZQ2M2Z5 673 aa6.22□□□□□ -1.41
LRCH3-211ENST00000466054 KCNT2Q6UVM3 1135 aa6.22□□□□□ -1.41
LRCH3-211ENST00000466054 LBX2Q6XYB7 198 aa6.22□□□□□ -1.41
LRCH3-211ENST00000466054 IL17DQ8TAD2 202 aa6.22□□□□□ -1.41
LRCH3-211ENST00000466054 LARP4BQ92615 738 aaKnown RBP6.22□□□□□ -1.41
LRCH3-211ENST00000466054 CARD11Q9BXL7 1154 aa6.22□□□□□ -1.41
LRCH3-211ENST00000466054 SLKQ9H2G2 1235 aaPredicted RBP6.22□□□□□ -1.41
LRCH3-211ENST00000466054 C12orf65Q9H3J6 166 aaKnown RBP6.22□□□□□ -1.41
LRCH3-211ENST00000466054 TMX1Q9H3N1 280 aa6.22□□□□□ -1.41
LRCH3-211ENST00000466054 SLC52A2Q9HAB3 445 aa6.22□□□□□ -1.41
LRCH3-211ENST00000466054 ARHGAP20Q9P2F6 1191 aa6.22□□□□□ -1.41
LRCH3-211ENST00000466054 NDOR1Q9UHB4 597 aa6.22□□□□□ -1.41
LRCH3-211ENST00000466054 OAZ3Q9UMX2 235 aa6.22□□□□□ -1.41
LRCH3-211ENST00000466054 WASF3Q9UPY6 502 aa6.22□□□□□ -1.41
LRCH3-211ENST00000466054 DMRT1Q9Y5R6 373 aa6.22□□□□□ -1.41
LRCH3-211ENST00000466054 PLSCR1O15162 318 aa6.21□□□□□ -1.42
LRCH3-211ENST00000466054 PABPC4Q13310 644 aaKnown RBP eCLIP6.21□□□□□ -1.42
LRCH3-211ENST00000466054 SKIDA1Q1XH10 827 aa6.21□□□□□ -1.42
LRCH3-211ENST00000466054 TKFCQ3LXA3 575 aa6.21□□□□□ -1.42
LRCH3-211ENST00000466054 STPG3Q8N7X2 389 aa6.21□□□□□ -1.42
LRCH3-211ENST00000466054 SLC7A14Q8TBB6 771 aa6.21□□□□□ -1.42
LRCH3-211ENST00000466054 PPIL4Q8WUA2 492 aaKnown RBP eCLIP6.21□□□□□ -1.42
LRCH3-211ENST00000466054 NINJ1Q92982 152 aa6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms