RNA–Protein interactions for RNA: ENST00000466032.1

CHMP3-206, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2

Gene CHMP3, Length 436 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-206ENST00000466032 EXOC8Q8IYI6 725 aa6.74□□□□□ -1.33
CHMP3-206ENST00000466032 FMR1NBQ8N0W7 255 aaPredicted RBP6.74□□□□□ -1.33
CHMP3-206ENST00000466032 CNNM3Q8NE01 707 aa6.74□□□□□ -1.33
CHMP3-206ENST00000466032 SCFD2Q8WU76 684 aa6.74□□□□□ -1.33
CHMP3-206ENST00000466032 TBC1D5Q92609 795 aa6.74□□□□□ -1.33
CHMP3-206ENST00000466032 HAS1Q92839 578 aa6.74□□□□□ -1.33
CHMP3-206ENST00000466032 LENG9Q96B70 501 aa6.74□□□□□ -1.33
CHMP3-206ENST00000466032 CNTNAP3BQ96NU0 1288 aa6.74□□□□□ -1.33
CHMP3-206ENST00000466032 BEGAINQ9BUH8 593 aa6.74□□□□□ -1.33
CHMP3-206ENST00000466032 POLR3CQ9BUI4 534 aaPredicted RBP6.74□□□□□ -1.33
CHMP3-206ENST00000466032 CNTNAP3Q9BZ76 1288 aa6.74□□□□□ -1.33
CHMP3-206ENST00000466032 ABHD16BQ9H3Z7 469 aa6.74□□□□□ -1.33
CHMP3-206ENST00000466032 DISC1Q9NRI5 854 aa6.74□□□□□ -1.33
CHMP3-206ENST00000466032 KCNH7Q9NS40 1196 aa6.74□□□□□ -1.33
CHMP3-206ENST00000466032 DACT1Q9NYF0 836 aa6.74□□□□□ -1.33
CHMP3-206ENST00000466032 KCND2Q9NZV8 630 aa6.74□□□□□ -1.33
CHMP3-206ENST00000466032 KCNG1Q9UIX4 513 aa6.74□□□□□ -1.33
CHMP3-206ENST00000466032 PPME1Q9Y570 386 aa6.74□□□□□ -1.33
CHMP3-206ENST00000466032 COL11A1P12107 1806 aaPredicted RBP6.73□□□□□ -1.33
CHMP3-206ENST00000466032 ZNF236Q9UL36 1845 aa6.73□□□□□ -1.33
CHMP3-206ENST00000466032 A0A1B0GVL5 298 aa6.73□□□□□ -1.33
CHMP3-206ENST00000466032 WDR64B1ANS9 1081 aa6.73□□□□□ -1.33
CHMP3-206ENST00000466032 SPATA31C2B4DYI2 1134 aa6.73□□□□□ -1.33
CHMP3-206ENST00000466032 GADD45BO75293 160 aaPredicted RBP6.73□□□□□ -1.33
CHMP3-206ENST00000466032 LYPLA2O95372 231 aa6.73□□□□□ -1.33
CHMP3-206ENST00000466032 P4HBP07237 508 aaKnown RBP6.73□□□□□ -1.33
CHMP3-206ENST00000466032 CCDC192P0DO97 292 aa6.73□□□□□ -1.33
CHMP3-206ENST00000466032 MYCLP12524 364 aaPredicted RBP6.73□□□□□ -1.33
CHMP3-206ENST00000466032 ITGB5P18084 799 aa6.73□□□□□ -1.33
CHMP3-206ENST00000466032 ABCD1P33897 745 aa6.73□□□□□ -1.33
CHMP3-206ENST00000466032 STAT6P42226 847 aa6.73□□□□□ -1.33
CHMP3-206ENST00000466032 TECP42680 631 aa6.73□□□□□ -1.33
CHMP3-206ENST00000466032 SLC26A2P50443 739 aa6.73□□□□□ -1.33
CHMP3-206ENST00000466032 NDUFA8P51970 172 aa6.73□□□□□ -1.33
CHMP3-206ENST00000466032 MRPS9P82933 396 aaKnown RBP6.73□□□□□ -1.33
CHMP3-206ENST00000466032 RBM10P98175 930 aaKnown RBP6.73□□□□□ -1.33
CHMP3-206ENST00000466032 SP3Q02447 781 aa6.73□□□□□ -1.33
CHMP3-206ENST00000466032 SNW1Q13573 536 aaKnown RBP6.73□□□□□ -1.33
CHMP3-206ENST00000466032 BRDTQ58F21 947 aaPredicted RBP6.73□□□□□ -1.33
CHMP3-206ENST00000466032 MORN1Q5T089 497 aa6.73□□□□□ -1.33
CHMP3-206ENST00000466032 IQSEC1Q6DN90 963 aa6.73□□□□□ -1.33
CHMP3-206ENST00000466032 CAVIN1Q6NZI2 390 aaKnown RBP6.73□□□□□ -1.33
CHMP3-206ENST00000466032 KRBA2Q6ZNG9 492 aa6.73□□□□□ -1.33
CHMP3-206ENST00000466032 OTOP1Q7RTM1 612 aa6.73□□□□□ -1.33
CHMP3-206ENST00000466032 TRIML1Q8N9V2 468 aa6.73□□□□□ -1.33
CHMP3-206ENST00000466032 GPT2Q8TD30 523 aa6.73□□□□□ -1.33
CHMP3-206ENST00000466032 SYMPKQ92797 1274 aaKnown RBP6.73□□□□□ -1.33
CHMP3-206ENST00000466032 ERO1AQ96HE7 468 aa6.73□□□□□ -1.33
CHMP3-206ENST00000466032 NACC1Q96RE7 527 aa6.73□□□□□ -1.33
CHMP3-206ENST00000466032 APBA2Q99767 749 aa6.73□□□□□ -1.33
CHMP3-206ENST00000466032 TIPINQ9BVW5 301 aa6.73□□□□□ -1.33
CHMP3-206ENST00000466032 FTOQ9C0B1 505 aaKnown RBP eCLIP6.73□□□□□ -1.33
CHMP3-206ENST00000466032 NAT10Q9H0A0 1025 aaKnown RBP6.73□□□□□ -1.33
CHMP3-206ENST00000466032 TMEM60Q9H2L4 133 aa6.73□□□□□ -1.33
CHMP3-206ENST00000466032 TNMDQ9H2S6 317 aa6.73□□□□□ -1.33
CHMP3-206ENST00000466032 CLSTN2Q9H4D0 955 aa6.73□□□□□ -1.33
CHMP3-206ENST00000466032 EFCC1Q9HA90 598 aa6.73□□□□□ -1.33
CHMP3-206ENST00000466032 AGO4Q9HCK5 861 aaKnown RBP6.73□□□□□ -1.33
CHMP3-206ENST00000466032 RMND1Q9NWS8 449 aa6.73□□□□□ -1.33
CHMP3-206ENST00000466032 COL20A1Q9P218 1284 aa6.73□□□□□ -1.33
CHMP3-206ENST00000466032 DNM3Q9UQ16 869 aa6.73□□□□□ -1.33
CHMP3-206ENST00000466032 Q9Y3F1 56 aa6.73□□□□□ -1.33
CHMP3-206ENST00000466032 PCDHA10Q9Y5I2 948 aa6.73□□□□□ -1.33
CHMP3-206ENST00000466032 MYH7BA7E2Y1 1941 aa6.73□□□□□ -1.33
CHMP3-206ENST00000466032 RBM47A0AV96 593 aaKnown RBP6.72□□□□□ -1.33
CHMP3-206ENST00000466032 TNPO2O14787 897 aaKnown RBP6.72□□□□□ -1.33
CHMP3-206ENST00000466032 ADAMTS3O15072 1205 aa6.72□□□□□ -1.33
CHMP3-206ENST00000466032 POLR2DO15514 142 aaKnown RBP6.72□□□□□ -1.33
CHMP3-206ENST00000466032 MAP3K7O43318 606 aa6.72□□□□□ -1.33
CHMP3-206ENST00000466032 EDIL3O43854 480 aa6.72□□□□□ -1.33
CHMP3-206ENST00000466032 KIF20AO95235 890 aa6.72□□□□□ -1.33
CHMP3-206ENST00000466032 PSAPP07602 524 aa6.72□□□□□ -1.33
CHMP3-206ENST00000466032 CAPN2P17655 700 aa6.72□□□□□ -1.33
CHMP3-206ENST00000466032 SCP2P22307 547 aa6.72□□□□□ -1.33
CHMP3-206ENST00000466032 CCT6AP40227 531 aaKnown RBP6.72□□□□□ -1.33
CHMP3-206ENST00000466032 ZNF445P59923 1031 aa6.72□□□□□ -1.33
CHMP3-206ENST00000466032 CRHR2Q13324 411 aa6.72□□□□□ -1.33
CHMP3-206ENST00000466032 LAMC2Q13753 1193 aa6.72□□□□□ -1.33
CHMP3-206ENST00000466032 MFSD10Q14728 455 aa6.72□□□□□ -1.33
CHMP3-206ENST00000466032 TAF3Q5VWG9 929 aa6.72□□□□□ -1.33
CHMP3-206ENST00000466032 MIS18BP1Q6P0N0 1132 aa6.72□□□□□ -1.33
CHMP3-206ENST00000466032 CNNM4Q6P4Q7 775 aa6.72□□□□□ -1.33
CHMP3-206ENST00000466032 SASS6Q6UVJ0 657 aa6.72□□□□□ -1.33
CHMP3-206ENST00000466032 B3GNT9Q6UX72 402 aa6.72□□□□□ -1.33
CHMP3-206ENST00000466032 RBM43Q6ZSC3 357 aaKnown RBP6.72□□□□□ -1.33
CHMP3-206ENST00000466032 SV2BQ7L1I2 683 aa6.72□□□□□ -1.33
CHMP3-206ENST00000466032 OTUD6AQ7L8S5 288 aa6.72□□□□□ -1.33
CHMP3-206ENST00000466032 MIER3Q7Z3K6 550 aa6.72□□□□□ -1.33
CHMP3-206ENST00000466032 SLC17A8Q8NDX2 589 aa6.72□□□□□ -1.33
CHMP3-206ENST00000466032 SNX29Q8TEQ0 813 aa6.72□□□□□ -1.33
CHMP3-206ENST00000466032 WHAMMQ8TF30 809 aa6.72□□□□□ -1.33
CHMP3-206ENST00000466032 LARP4BQ92615 738 aaKnown RBP6.72□□□□□ -1.33
CHMP3-206ENST00000466032 ATP6V0A1Q93050 837 aa6.72□□□□□ -1.33
CHMP3-206ENST00000466032 MAML3Q96JK9 1138 aa6.72□□□□□ -1.33
CHMP3-206ENST00000466032 CLIC6Q96NY7 704 aa6.72□□□□□ -1.33
CHMP3-206ENST00000466032 GSDMAQ96QA5 445 aa6.72□□□□□ -1.33
CHMP3-206ENST00000466032 TINF2Q9BSI4 451 aa6.72□□□□□ -1.33
CHMP3-206ENST00000466032 PORCNQ9H237 461 aa6.72□□□□□ -1.33
CHMP3-206ENST00000466032 ZSWIM4Q9H7M6 989 aa6.72□□□□□ -1.33
CHMP3-206ENST00000466032 JPH1Q9HDC5 661 aaPredicted RBP6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms