RNA–Protein interactions for RNA: ENST00000465966.4

DDR1-242, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 1 (best)

Gene DDR1, Length 268 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-242ENST00000465966 EHMT1Q9H9B1 1298 aa9.82□□□□□ -0.84
DDR1-242ENST00000465966 RC3H2Q9HBD1 1191 aaKnown RBP9.82□□□□□ -0.84
DDR1-242ENST00000465966 RTEL1Q9NZ71 1219 aa9.82□□□□□ -0.84
DDR1-242ENST00000465966 NID2Q14112 1375 aa9.82□□□□□ -0.84
DDR1-242ENST00000465966 PTPRSQ13332 1948 aa9.82□□□□□ -0.84
DDR1-242ENST00000465966 M0QZ92 97 aa9.81□□□□□ -0.84
DDR1-242ENST00000465966 PPP1R11O60927 126 aaPredicted RBP9.81□□□□□ -0.84
DDR1-242ENST00000465966 PDIA3P30101 505 aaKnown RBP9.81□□□□□ -0.84
DDR1-242ENST00000465966 NRIP1P48552 1158 aa9.81□□□□□ -0.84
DDR1-242ENST00000465966 SP4Q02446 784 aa9.81□□□□□ -0.84
DDR1-242ENST00000465966 SCRN1Q12765 414 aa9.81□□□□□ -0.84
DDR1-242ENST00000465966 TCF15Q12870 199 aa9.81□□□□□ -0.84
DDR1-242ENST00000465966 PPFIA1Q13136 1202 aa9.81□□□□□ -0.84
DDR1-242ENST00000465966 LPIN1Q14693 890 aa9.81□□□□□ -0.84
DDR1-242ENST00000465966 CBX2Q14781 532 aaPredicted RBP9.81□□□□□ -0.84
DDR1-242ENST00000465966 IER5Q5VY09 327 aa9.81□□□□□ -0.84
DDR1-242ENST00000465966 XRRA1Q6P2D8 792 aa9.81□□□□□ -0.84
DDR1-242ENST00000465966 TSHZ1Q6ZSZ6 1077 aa9.81□□□□□ -0.84
DDR1-242ENST00000465966 RBM23Q86U06 439 aaKnown RBP9.81□□□□□ -0.84
DDR1-242ENST00000465966 NLRX1Q86UT6 975 aa9.81□□□□□ -0.84
DDR1-242ENST00000465966 TRIM50Q86XT4 487 aa9.81□□□□□ -0.84
DDR1-242ENST00000465966 RAB11FIP4Q86YS3 637 aa9.81□□□□□ -0.84
DDR1-242ENST00000465966 SPPL3Q8TCT6 385 aa9.81□□□□□ -0.84
DDR1-242ENST00000465966 POF1BQ8WVV4 589 aa9.81□□□□□ -0.84
DDR1-242ENST00000465966 RPGRIP1Q96KN7 1286 aa9.81□□□□□ -0.84
DDR1-242ENST00000465966 SENP7Q9BQF6 1050 aa9.81□□□□□ -0.84
DDR1-242ENST00000465966 BCAS3Q9H6U6 928 aa9.81□□□□□ -0.84
DDR1-242ENST00000465966 NCOA5Q9HCD5 579 aaKnown RBP9.81□□□□□ -0.84
DDR1-242ENST00000465966 CLEC1BQ9P126 229 aa9.81□□□□□ -0.84
DDR1-242ENST00000465966 MAD2L2Q9UI95 211 aa9.81□□□□□ -0.84
DDR1-242ENST00000465966 TUBE1Q9UJT0 475 aa9.81□□□□□ -0.84
DDR1-242ENST00000465966 MRPL42Q9Y6G3 142 aaKnown RBP9.81□□□□□ -0.84
DDR1-242ENST00000465966 TRIP12Q14669 1992 aaPredicted RBP9.81□□□□□ -0.84
DDR1-242ENST00000465966 PNMA6FA0A0J9YX94 578 aa9.8□□□□□ -0.84
DDR1-242ENST00000465966 PALM3A6NDB9 673 aaPredicted RBP9.8□□□□□ -0.84
DDR1-242ENST00000465966 IFIT3O14879 490 aaKnown RBP9.8□□□□□ -0.84
DDR1-242ENST00000465966 JAK2O60674 1132 aa9.8□□□□□ -0.84
DDR1-242ENST00000465966 ITGB1P05556 798 aa9.8□□□□□ -0.84
DDR1-242ENST00000465966 SRGAP2BP0DMP2 458 aa9.8□□□□□ -0.84
DDR1-242ENST00000465966 ATF7P17544 494 aaPredicted RBP9.8□□□□□ -0.84
DDR1-242ENST00000465966 GJB2P29033 226 aa9.8□□□□□ -0.84
DDR1-242ENST00000465966 AVPR2P30518 371 aa9.8□□□□□ -0.84
DDR1-242ENST00000465966 LIFRP42702 1097 aa9.8□□□□□ -0.84
DDR1-242ENST00000465966 NUBP1P53384 320 aa9.8□□□□□ -0.84
DDR1-242ENST00000465966 MRPS9P82933 396 aaKnown RBP9.8□□□□□ -0.84
DDR1-242ENST00000465966 MGAT3Q09327 533 aa9.8□□□□□ -0.84
DDR1-242ENST00000465966 CAMK1Q14012 370 aa9.8□□□□□ -0.84
DDR1-242ENST00000465966 SEC23AQ15436 765 aa9.8□□□□□ -0.84
DDR1-242ENST00000465966 GRIK4Q16099 956 aa9.8□□□□□ -0.84
DDR1-242ENST00000465966 FBXO47Q5MNV8 452 aa9.8□□□□□ -0.84
DDR1-242ENST00000465966 APOA5Q6Q788 366 aa9.8□□□□□ -0.84
DDR1-242ENST00000465966 RUFY4Q6ZNE9 571 aa9.8□□□□□ -0.84
DDR1-242ENST00000465966 ZBTB33Q86T24 672 aa9.8□□□□□ -0.84
DDR1-242ENST00000465966 SGMS1Q86VZ5 419 aa9.8□□□□□ -0.84
DDR1-242ENST00000465966 NPAS4Q8IUM7 802 aa9.8□□□□□ -0.84
DDR1-242ENST00000465966 KLHL23Q8NBE8 558 aa9.8□□□□□ -0.84
DDR1-242ENST00000465966 SMARCC2Q8TAQ2 1214 aa9.8□□□□□ -0.84
DDR1-242ENST00000465966 DNAJB3Q8WWF6 145 aa9.8□□□□□ -0.84
DDR1-242ENST00000465966 SEPT1Q8WYJ6 367 aa9.8□□□□□ -0.84
DDR1-242ENST00000465966 GLG1Q92896 1179 aa9.8□□□□□ -0.84
DDR1-242ENST00000465966 TNPO1Q92973 898 aaKnown RBP9.8□□□□□ -0.84
DDR1-242ENST00000465966 CUL5Q93034 780 aa9.8□□□□□ -0.84
DDR1-242ENST00000465966 ZNF274Q96GC6 653 aaPredicted RBP9.8□□□□□ -0.84
DDR1-242ENST00000465966 CDHR1Q96JP9 859 aa9.8□□□□□ -0.84
DDR1-242ENST00000465966 PIGSQ96S52 555 aa9.8□□□□□ -0.84
DDR1-242ENST00000465966 CDCA3Q99618 268 aaPredicted RBP9.8□□□□□ -0.84
DDR1-242ENST00000465966 MTA3Q9BTC8 594 aa9.8□□□□□ -0.84
DDR1-242ENST00000465966 TLE6Q9H808 572 aa9.8□□□□□ -0.84
DDR1-242ENST00000465966 AAASQ9NRG9 546 aa9.8□□□□□ -0.84
DDR1-242ENST00000465966 RNF216Q9NWF9 866 aaPredicted RBP9.8□□□□□ -0.84
DDR1-242ENST00000465966 ERAP1Q9NZ08 941 aa9.8□□□□□ -0.84
DDR1-242ENST00000465966 LRFN2Q9ULH4 789 aa9.8□□□□□ -0.84
DDR1-242ENST00000465966 NAP1L2Q9ULW6 460 aaPredicted RBP9.8□□□□□ -0.84
DDR1-242ENST00000465966 SMC3Q9UQE7 1217 aa9.8□□□□□ -0.84
DDR1-242ENST00000465966 USP15Q9Y4E8 981 aaPredicted RBP9.8□□□□□ -0.84
DDR1-242ENST00000465966 ZSCAN21Q9Y5A6 473 aaPredicted RBP9.8□□□□□ -0.84
DDR1-242ENST00000465966 CDY2AQ9Y6F7 541 aa9.8□□□□□ -0.84
DDR1-242ENST00000465966 SQORQ9Y6N5 450 aa9.8□□□□□ -0.84
DDR1-242ENST00000465966 BRWD1Q9NSI6 2320 aa9.79□□□□□ -0.84
DDR1-242ENST00000465966 ERICH2A1L162 156 aa9.79□□□□□ -0.84
DDR1-242ENST00000465966 RRN3P2A6NIE6 340 aa9.79□□□□□ -0.84
DDR1-242ENST00000465966 CTDNEP1O95476 244 aa9.79□□□□□ -0.84
DDR1-242ENST00000465966 CD52P31358 61 aa9.79□□□□□ -0.84
DDR1-242ENST00000465966 TCF7P36402 384 aaPredicted RBP9.79□□□□□ -0.84
DDR1-242ENST00000465966 CCT2P78371 535 aaKnown RBP9.79□□□□□ -0.84
DDR1-242ENST00000465966 UBE3AQ05086 875 aa9.79□□□□□ -0.84
DDR1-242ENST00000465966 WTAPQ15007 396 aa9.79□□□□□ -0.84
DDR1-242ENST00000465966 PAN2Q504Q3 1202 aaKnown RBP9.79□□□□□ -0.84
DDR1-242ENST00000465966 SPOUT1Q5T280 376 aaKnown RBP9.79□□□□□ -0.84
DDR1-242ENST00000465966 PCNX4Q63HM2 1172 aa9.79□□□□□ -0.84
DDR1-242ENST00000465966 FAM43BQ6ZT52 329 aaPredicted RBP9.79□□□□□ -0.84
DDR1-242ENST00000465966 ADGRD2Q7Z7M1 963 aa9.79□□□□□ -0.84
DDR1-242ENST00000465966 MICU3Q86XE3 530 aa9.79□□□□□ -0.84
DDR1-242ENST00000465966 NSUN7Q8NE18 718 aaKnown RBP9.79□□□□□ -0.84
DDR1-242ENST00000465966 MYL10Q9BUA6 226 aa9.79□□□□□ -0.84
DDR1-242ENST00000465966 SMARCAD1Q9H4L7 1026 aa9.79□□□□□ -0.84
DDR1-242ENST00000465966 RIOX1Q9H6W3 641 aa9.79□□□□□ -0.84
DDR1-242ENST00000465966 BARX2Q9UMQ3 279 aaPredicted RBP9.79□□□□□ -0.84
DDR1-242ENST00000465966 ZDHHC9Q9Y397 364 aa9.79□□□□□ -0.84
DDR1-242ENST00000465966 PCDHB12Q9Y5F1 795 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms