RNA–Protein interactions for RNA: ENST00000465903.5

SMC4-206, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 849 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-206ENST00000465903 HERVK_113Q902F9 699 aa29.22■■■□□ 2.27
SMC4-206ENST00000465903 TNPO1Q92973 898 aaKnown RBP29.22■■■□□ 2.27
SMC4-206ENST00000465903 LRCH3Q96II8 777 aa29.22■■■□□ 2.27
SMC4-206ENST00000465903 TUBE1Q9UJT0 475 aa29.22■■■□□ 2.27
SMC4-206ENST00000465903 SMC3Q9UQE7 1217 aa29.22■■■□□ 2.27
SMC4-206ENST00000465903 ZSCAN21Q9Y5A6 473 aaPredicted RBP29.22■■■□□ 2.27
SMC4-206ENST00000465903 ZNF862O60290 1169 aa29.21■■■□□ 2.27
SMC4-206ENST00000465903 NBNO60934 754 aa29.21■■■□□ 2.27
SMC4-206ENST00000465903 PFKMP08237 780 aa29.21■■■□□ 2.27
SMC4-206ENST00000465903 PPP2R5CQ13362 524 aa29.21■■■□□ 2.27
SMC4-206ENST00000465903 KIF3AQ9Y496 699 aa29.21■■■□□ 2.27
SMC4-206ENST00000465903 LAMA2P24043 3122 aaKnown RBP29.2■■■□□ 2.27
SMC4-206ENST00000465903 ATP2B1P20020 1258 aa29.2■■■□□ 2.26
SMC4-206ENST00000465903 RPAINQ86UA6 219 aa29.2■■■□□ 2.26
SMC4-206ENST00000465903 NOSTRINQ8IVI9 506 aa29.2■■■□□ 2.26
SMC4-206ENST00000465903 BBXQ8WY36 941 aaPredicted RBP29.2■■■□□ 2.26
SMC4-206ENST00000465903 CXXC1Q9P0U4 656 aaPredicted RBP29.2■■■□□ 2.26
SMC4-206ENST00000465903 ZBTB42B2RXF5 422 aa29.19■■■□□ 2.26
SMC4-206ENST00000465903 CAND2O75155 1236 aa29.19■■■□□ 2.26
SMC4-206ENST00000465903 PARNO95453 639 aaKnown RBP29.19■■■□□ 2.26
SMC4-206ENST00000465903 CXCL10P02778 98 aa29.19■■■□□ 2.26
SMC4-206ENST00000465903 FAM26DQ5JW98 314 aa29.19■■■□□ 2.26
SMC4-206ENST00000465903 TAF2Q6P1X5 1199 aa29.19■■■□□ 2.26
SMC4-206ENST00000465903 OTOP2Q7RTS6 562 aa29.19■■■□□ 2.26
SMC4-206ENST00000465903 MTMR9Q96QG7 549 aa29.19■■■□□ 2.26
SMC4-206ENST00000465903 OSBPL7Q9BZF2 842 aa29.19■■■□□ 2.26
SMC4-206ENST00000465903 TMEM60Q9H2L4 133 aa29.19■■■□□ 2.26
SMC4-206ENST00000465903 COL1A2P08123 1366 aa29.18■■■□□ 2.26
SMC4-206ENST00000465903 RSPH10B2B2RC85 870 aa29.18■■■□□ 2.26
SMC4-206ENST00000465903 BAG4O95429 457 aaKnown RBP29.18■■■□□ 2.26
SMC4-206ENST00000465903 RSPH10BP0C881 870 aa29.18■■■□□ 2.26
SMC4-206ENST00000465903 SPIRE1Q08AE8 756 aa29.18■■■□□ 2.26
SMC4-206ENST00000465903 ZNF484Q5JVG2 852 aa29.18■■■□□ 2.26
SMC4-206ENST00000465903 MTHFD1LQ6UB35 978 aa29.18■■■□□ 2.26
SMC4-206ENST00000465903 TRMT1LQ7Z2T5 733 aaKnown RBP29.18■■■□□ 2.26
SMC4-206ENST00000465903 CKAP2LQ8IYA6 745 aa29.18■■■□□ 2.26
SMC4-206ENST00000465903 SLFN12Q8IYM2 578 aa29.18■■■□□ 2.26
SMC4-206ENST00000465903 DNAJB3Q8WWF6 145 aa29.18■■■□□ 2.26
SMC4-206ENST00000465903 PCDHA2Q9Y5H9 948 aa29.18■■■□□ 2.26
SMC4-206ENST00000465903 GBF1Q92538 1859 aa29.18■■■□□ 2.26
SMC4-206ENST00000465903 MARCH6O60337 910 aa29.17■■■□□ 2.26
SMC4-206ENST00000465903 STBD1O95210 358 aa29.17■■■□□ 2.26
SMC4-206ENST00000465903 KLRC1P26715 233 aa29.17■■■□□ 2.26
SMC4-206ENST00000465903 TCTN1Q2MV58 587 aa29.17■■■□□ 2.26
SMC4-206ENST00000465903 FTOQ9C0B1 505 aaKnown RBP eCLIP29.17■■■□□ 2.26
SMC4-206ENST00000465903 PTPRSQ13332 1948 aa29.17■■■□□ 2.26
SMC4-206ENST00000465903 NEMFO60524 1076 aa29.16■■■□□ 2.26
SMC4-206ENST00000465903 CTSHP09668 335 aa29.16■■■□□ 2.26
SMC4-206ENST00000465903 GNL2Q13823 731 aaKnown RBP29.16■■■□□ 2.26
SMC4-206ENST00000465903 ZNF174Q15697 407 aa29.16■■■□□ 2.26
SMC4-206ENST00000465903 CALCRLQ16602 461 aa29.16■■■□□ 2.26
SMC4-206ENST00000465903 CHRNA1P02708 482 aa29.15■■■□□ 2.26
SMC4-206ENST00000465903 OATP04181 439 aa29.15■■■□□ 2.26
SMC4-206ENST00000465903 MCM7P33993 719 aa29.15■■■□□ 2.26
SMC4-206ENST00000465903 TOB1P50616 345 aaPredicted RBP29.15■■■□□ 2.26
SMC4-206ENST00000465903 PRKCEQ02156 737 aa29.15■■■□□ 2.26
SMC4-206ENST00000465903 MGAT3Q09327 533 aa29.15■■■□□ 2.26
SMC4-206ENST00000465903 BANK1Q8NDB2 785 aa29.15■■■□□ 2.26
SMC4-206ENST00000465903 SNX21Q969T3 373 aa29.15■■■□□ 2.26
SMC4-206ENST00000465903 FAM167AQ96KS9 214 aa29.15■■■□□ 2.26
SMC4-206ENST00000465903 NRBP2Q9NSY0 501 aa29.15■■■□□ 2.26
SMC4-206ENST00000465903 MICAL3Q7RTP6 2002 aa29.15■■■□□ 2.26
SMC4-206ENST00000465903 SMIM35A0A1B0GVV1 85 aa29.14■■■□□ 2.26
SMC4-206ENST00000465903 K7ELQ4 463 aaPredicted RBP29.14■■■□□ 2.26
SMC4-206ENST00000465903 TRAPPC10P48553 1259 aa29.14■■■□□ 2.26
SMC4-206ENST00000465903 EPHA7Q15375 998 aa29.14■■■□□ 2.26
SMC4-206ENST00000465903 TTC38Q5R3I4 469 aa29.14■■■□□ 2.26
SMC4-206ENST00000465903 LARP1BQ659C4 914 aaKnown RBP29.14■■■□□ 2.26
SMC4-206ENST00000465903 FAM109BQ6ICB4 259 aaPredicted RBP29.14■■■□□ 2.26
SMC4-206ENST00000465903 PCDHA12Q9UN75 941 aa29.14■■■□□ 2.26
SMC4-206ENST00000465903 SZT2Q5T011 3432 aa29.14■■■□□ 2.25
SMC4-206ENST00000465903 HSFX4A0A1B0GTS1 333 aaPredicted RBP29.13■■■□□ 2.25
SMC4-206ENST00000465903 HSFX3A0A1B0GWH4 333 aaPredicted RBP29.13■■■□□ 2.25
SMC4-206ENST00000465903 C22orf31O95567 290 aa29.13■■■□□ 2.25
SMC4-206ENST00000465903 TXKP42681 527 aa29.13■■■□□ 2.25
SMC4-206ENST00000465903 NBR1Q14596 966 aa29.13■■■□□ 2.25
SMC4-206ENST00000465903 NCAPH2Q6IBW4 605 aa29.13■■■□□ 2.25
SMC4-206ENST00000465903 FAM49AQ9H0Q0 323 aaPredicted RBP29.13■■■□□ 2.25
SMC4-206ENST00000465903 TTC12Q9H892 705 aaPredicted RBP29.13■■■□□ 2.25
SMC4-206ENST00000465903 GRXCR1A8MXD5 290 aa29.12■■■□□ 2.25
SMC4-206ENST00000465903 H3BQV1 296 aa29.12■■■□□ 2.25
SMC4-206ENST00000465903 ACTN1P12814 892 aa29.12■■■□□ 2.25
SMC4-206ENST00000465903 PSMC5P62195 406 aa29.12■■■□□ 2.25
SMC4-206ENST00000465903 SMAD3P84022 425 aaKnown RBP29.12■■■□□ 2.25
SMC4-206ENST00000465903 ORC2Q13416 577 aaPredicted RBP29.12■■■□□ 2.25
SMC4-206ENST00000465903 TARBP2Q15633 366 aaKnown RBP29.12■■■□□ 2.25
SMC4-206ENST00000465903 MCTP1Q6DN14 999 aa29.12■■■□□ 2.25
SMC4-206ENST00000465903 CNKSR3Q6P9H4 555 aa29.12■■■□□ 2.25
SMC4-206ENST00000465903 RSPH3Q86UC2 560 aa29.12■■■□□ 2.25
SMC4-206ENST00000465903 C4orf32Q8N8J7 132 aa29.12■■■□□ 2.25
SMC4-206ENST00000465903 NIFKQ9BYG3 293 aaKnown RBP29.12■■■□□ 2.25
SMC4-206ENST00000465903 WRAP73Q9P2S5 460 aaPredicted RBP29.12■■■□□ 2.25
SMC4-206ENST00000465903 NOL7Q9UMY1 257 aaKnown RBP29.12■■■□□ 2.25
SMC4-206ENST00000465903 CEP131Q9UPN4 1083 aa29.12■■■□□ 2.25
SMC4-206ENST00000465903 P4HBP07237 508 aaKnown RBP29.11■■■□□ 2.25
SMC4-206ENST00000465903 XKR3Q5GH77 459 aa29.11■■■□□ 2.25
SMC4-206ENST00000465903 KIAA0319LQ8IZA0 1049 aa29.11■■■□□ 2.25
SMC4-206ENST00000465903 INTS4Q96HW7 963 aaKnown RBP29.11■■■□□ 2.25
SMC4-206ENST00000465903 CEP89Q96ST8 783 aa29.11■■■□□ 2.25
SMC4-206ENST00000465903 MTIF3Q9H2K0 278 aaKnown RBP29.11■■■□□ 2.25
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms