RNA–Protein interactions for RNA: ENST00000465245.1

TRA2B-208, Transcript of transformer 2 beta homolog, humanhuman

TSL 3

Gene TRA2B, Length 634 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-208ENST00000465245 NEK1Q96PY6 1258 aa13.83□□□□□ -0.2
TRA2B-208ENST00000465245 TLR9Q9NR96 1032 aa13.83□□□□□ -0.2
TRA2B-208ENST00000465245 PKD2L1Q9P0L9 805 aa13.83□□□□□ -0.2
TRA2B-208ENST00000465245 PCDHB12Q9Y5F1 795 aa13.83□□□□□ -0.2
TRA2B-208ENST00000465245 IGSF9BQ9UPX0 1349 aa13.83□□□□□ -0.2
TRA2B-208ENST00000465245 WDR87Q6ZQQ6 2873 aa13.83□□□□□ -0.2
TRA2B-208ENST00000465245 RRN3P2A6NIE6 340 aa13.82□□□□□ -0.2
TRA2B-208ENST00000465245 PIK3CDO00329 1044 aa13.82□□□□□ -0.2
TRA2B-208ENST00000465245 MEIS2O14770 477 aa13.82□□□□□ -0.2
TRA2B-208ENST00000465245 SRGAP2BP0DMP2 458 aa13.82□□□□□ -0.2
TRA2B-208ENST00000465245 INSRRP14616 1297 aa13.82□□□□□ -0.2
TRA2B-208ENST00000465245 TROAPQ12815 778 aa13.82□□□□□ -0.2
TRA2B-208ENST00000465245 WTAPQ15007 396 aa13.82□□□□□ -0.2
TRA2B-208ENST00000465245 DUSP6Q16828 381 aa13.82□□□□□ -0.2
TRA2B-208ENST00000465245 B4GALNT3Q6L9W6 998 aa13.82□□□□□ -0.2
TRA2B-208ENST00000465245 PLEKHM2Q8IWE5 1019 aa13.82□□□□□ -0.2
TRA2B-208ENST00000465245 ATP8B4Q8TF62 1192 aa13.82□□□□□ -0.2
TRA2B-208ENST00000465245 SUSD6Q92537 303 aa13.82□□□□□ -0.2
TRA2B-208ENST00000465245 CDCA3Q99618 268 aaPredicted RBP13.82□□□□□ -0.2
TRA2B-208ENST00000465245 OSBPL3Q9H4L5 887 aa13.82□□□□□ -0.2
TRA2B-208ENST00000465245 SENP2Q9HC62 589 aa13.82□□□□□ -0.2
TRA2B-208ENST00000465245 AAASQ9NRG9 546 aa13.82□□□□□ -0.2
TRA2B-208ENST00000465245 EVPLQ92817 2033 aa13.81□□□□□ -0.2
TRA2B-208ENST00000465245 PTPRZ1P23471 2315 aaPredicted RBP13.81□□□□□ -0.2
TRA2B-208ENST00000465245 MYO10Q9HD67 2058 aa13.81□□□□□ -0.2
TRA2B-208ENST00000465245 H0Y858 1186 aa13.81□□□□□ -0.2
TRA2B-208ENST00000465245 SARSP49591 514 aaKnown RBP13.81□□□□□ -0.2
TRA2B-208ENST00000465245 MTMR1Q13613 665 aa13.81□□□□□ -0.2
TRA2B-208ENST00000465245 SART3Q15020 963 aaKnown RBP13.81□□□□□ -0.2
TRA2B-208ENST00000465245 CATIPQ7Z7H3 387 aa13.81□□□□□ -0.2
TRA2B-208ENST00000465245 VN1R2Q8NFZ6 395 aa13.81□□□□□ -0.2
TRA2B-208ENST00000465245 RRP36Q96EU6 259 aaKnown RBP13.81□□□□□ -0.2
TRA2B-208ENST00000465245 CELF4Q9BZC1 486 aaKnown RBP13.81□□□□□ -0.2
TRA2B-208ENST00000465245 SEC63Q9UGP8 760 aaKnown RBP13.81□□□□□ -0.2
TRA2B-208ENST00000465245 TRPC6Q9Y210 931 aa13.81□□□□□ -0.2
TRA2B-208ENST00000465245 DCHS1Q96JQ0 3298 aa13.81□□□□□ -0.2
TRA2B-208ENST00000465245 FGF18O76093 207 aa13.8□□□□□ -0.2
TRA2B-208ENST00000465245 PDGFBP01127 241 aaPredicted RBP13.8□□□□□ -0.2
TRA2B-208ENST00000465245 ITGB5P18084 799 aa13.8□□□□□ -0.2
TRA2B-208ENST00000465245 SP100P23497 879 aaPredicted RBP13.8□□□□□ -0.2
TRA2B-208ENST00000465245 ERVFC1P60507 584 aa13.8□□□□□ -0.2
TRA2B-208ENST00000465245 FOXK2Q01167 660 aa13.8□□□□□ -0.2
TRA2B-208ENST00000465245 TMEM266Q2M3C6 531 aa13.8□□□□□ -0.2
TRA2B-208ENST00000465245 RALYLQ86SE5 291 aaKnown RBP13.8□□□□□ -0.2
TRA2B-208ENST00000465245 THNSL1Q8IYQ7 743 aa13.8□□□□□ -0.2
TRA2B-208ENST00000465245 TRAPPC12Q8WVT3 735 aa13.8□□□□□ -0.2
TRA2B-208ENST00000465245 TNPO1Q92973 898 aaKnown RBP13.8□□□□□ -0.2
TRA2B-208ENST00000465245 SPZ1Q9BXG8 430 aa13.8□□□□□ -0.2
TRA2B-208ENST00000465245 IL25Q9H293 177 aa13.8□□□□□ -0.2
TRA2B-208ENST00000465245 TMX1Q9H3N1 280 aa13.8□□□□□ -0.2
TRA2B-208ENST00000465245 AZI2Q9H6S1 392 aa13.8□□□□□ -0.2
TRA2B-208ENST00000465245 TMEM260Q9NX78 707 aa13.8□□□□□ -0.2
TRA2B-208ENST00000465245 PCDHB7Q9Y5E2 793 aa13.8□□□□□ -0.2
TRA2B-208ENST00000465245 PCDHA2Q9Y5H9 948 aa13.8□□□□□ -0.2
TRA2B-208ENST00000465245 RIF1Q5UIP0 2472 aaKnown RBP13.8□□□□□ -0.2
TRA2B-208ENST00000465245 FAM186AA6NE01 2351 aa13.79□□□□□ -0.2
TRA2B-208ENST00000465245 DENND3A2RUS2 1198 aa13.79□□□□□ -0.2
TRA2B-208ENST00000465245 TBKBP1A7MCY6 615 aa13.79□□□□□ -0.2
TRA2B-208ENST00000465245 CYP21A2P08686 494 aa13.79□□□□□ -0.2
TRA2B-208ENST00000465245 TECP42680 631 aa13.79□□□□□ -0.2
TRA2B-208ENST00000465245 NUBP1P53384 320 aa13.79□□□□□ -0.2
TRA2B-208ENST00000465245 KRT76Q01546 638 aa13.79□□□□□ -0.2
TRA2B-208ENST00000465245 NFX1Q12986 1120 aaKnown RBP13.79□□□□□ -0.2
TRA2B-208ENST00000465245 PLPP4Q5VZY2 271 aa13.79□□□□□ -0.2
TRA2B-208ENST00000465245 PDE12Q6L8Q7 609 aaKnown RBP13.79□□□□□ -0.2
TRA2B-208ENST00000465245 CHD1LQ86WJ1 897 aa13.79□□□□□ -0.2
TRA2B-208ENST00000465245 SMC5Q8IY18 1101 aa13.79□□□□□ -0.2
TRA2B-208ENST00000465245 COLGALT1Q8NBJ5 622 aa13.79□□□□□ -0.2
TRA2B-208ENST00000465245 RIPOR3Q96MK2 946 aa13.79□□□□□ -0.2
TRA2B-208ENST00000465245 PCYT2Q99447 389 aa13.79□□□□□ -0.2
TRA2B-208ENST00000465245 APOL5Q9BWW9 433 aa13.79□□□□□ -0.2
TRA2B-208ENST00000465245 JPH1Q9HDC5 661 aaPredicted RBP13.79□□□□□ -0.2
TRA2B-208ENST00000465245 RNF216Q9NWF9 866 aaPredicted RBP13.79□□□□□ -0.2
TRA2B-208ENST00000465245 HCSTQ9UBK5 93 aa13.79□□□□□ -0.2
TRA2B-208ENST00000465245 UBIAD1Q9Y5Z9 338 aa13.79□□□□□ -0.2
TRA2B-208ENST00000465245 U3KPZ7 1027 aaPredicted RBP13.79□□□□□ -0.2
TRA2B-208ENST00000465245 KDM3AQ9Y4C1 1321 aa13.79□□□□□ -0.2
TRA2B-208ENST00000465245 SMIM35A0A1B0GVV1 85 aa13.78□□□□□ -0.2
TRA2B-208ENST00000465245 FSCN2O14926 492 aa13.78□□□□□ -0.2
TRA2B-208ENST00000465245 GALR2O43603 387 aaPredicted RBP13.78□□□□□ -0.2
TRA2B-208ENST00000465245 MGEA5O60502 916 aa13.78□□□□□ -0.2
TRA2B-208ENST00000465245 PLCB4Q15147 1175 aa13.78□□□□□ -0.2
TRA2B-208ENST00000465245 ANKRD54Q6NXT1 300 aa13.78□□□□□ -0.2
TRA2B-208ENST00000465245 LLGL2Q6P1M3 1020 aa13.78□□□□□ -0.2
TRA2B-208ENST00000465245 CTCFLQ8NI51 663 aaPredicted RBP13.78□□□□□ -0.2
TRA2B-208ENST00000465245 S1PR5Q9H228 398 aa13.78□□□□□ -0.2
TRA2B-208ENST00000465245 ENTPD7Q9NQZ7 604 aa13.78□□□□□ -0.2
TRA2B-208ENST00000465245 TSHZ2Q9NRE2 1034 aa13.78□□□□□ -0.2
TRA2B-208ENST00000465245 SLC9A2Q9UBY0 812 aa13.78□□□□□ -0.2
TRA2B-208ENST00000465245 GINS2Q9Y248 185 aa13.78□□□□□ -0.2
TRA2B-208ENST00000465245 NR2E1Q9Y466 385 aa13.78□□□□□ -0.2
TRA2B-208ENST00000465245 SPDYE3A6NKU9 549 aa13.77□□□□□ -0.21
TRA2B-208ENST00000465245 PROB1E7EW31 1015 aa13.77□□□□□ -0.21
TRA2B-208ENST00000465245 MAFGO15525 162 aa13.77□□□□□ -0.21
TRA2B-208ENST00000465245 RPS6KA5O75582 802 aa13.77□□□□□ -0.21
TRA2B-208ENST00000465245 KIF5BP33176 963 aa13.77□□□□□ -0.21
TRA2B-208ENST00000465245 MYH9P35579 1960 aaKnown RBP13.77□□□□□ -0.21
TRA2B-208ENST00000465245 APOBRQ0VD83 1088 aa13.77□□□□□ -0.21
TRA2B-208ENST00000465245 UBE2SQ16763 222 aa13.77□□□□□ -0.21
TRA2B-208ENST00000465245 FAM102BQ5T8I3 360 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms