RNA–Protein interactions for RNA: ENST00000464616.6

GARNL3-213, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 5

Gene GARNL3, Length 549 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-213ENST00000464616 RTKN2Q8IZC4 609 aa4.81□□□□□ -1.64
GARNL3-213ENST00000464616 PDGFDQ9GZP0 370 aaPredicted RBP4.81□□□□□ -1.64
GARNL3-213ENST00000464616 INCENPQ9NQS7 918 aa4.81□□□□□ -1.64
GARNL3-213ENST00000464616 FAM184BQ9ULE4 1060 aa4.81□□□□□ -1.64
GARNL3-213ENST00000464616 SRPK3Q9UPE1 567 aa4.81□□□□□ -1.64
GARNL3-213ENST00000464616 GABREP78334 506 aa4.8□□□□□ -1.64
GARNL3-213ENST00000464616 USP39Q53GS9 565 aaKnown RBP4.8□□□□□ -1.64
GARNL3-213ENST00000464616 FIGNQ5HY92 759 aa4.8□□□□□ -1.64
GARNL3-213ENST00000464616 SPATC1Q76KD6 591 aa4.8□□□□□ -1.64
GARNL3-213ENST00000464616 C16orf59Q7L2K0 433 aa4.8□□□□□ -1.64
GARNL3-213ENST00000464616 POLNQ7Z5Q5 900 aa4.8□□□□□ -1.64
GARNL3-213ENST00000464616 GALNT8Q9NY28 637 aa4.8□□□□□ -1.64
GARNL3-213ENST00000464616 OAZ3Q9UMX2 235 aa4.8□□□□□ -1.64
GARNL3-213ENST00000464616 PTPN22Q9Y2R2 807 aa4.8□□□□□ -1.64
GARNL3-213ENST00000464616 ASXL2Q76L83 1435 aa4.8□□□□□ -1.64
GARNL3-213ENST00000464616 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP4.79□□□□□ -1.64
GARNL3-213ENST00000464616 CCDC66A2RUB6 948 aa4.79□□□□□ -1.64
GARNL3-213ENST00000464616 FAM90A27PA6NNH2 459 aa4.79□□□□□ -1.64
GARNL3-213ENST00000464616 ACO1P21399 889 aaKnown RBP4.79□□□□□ -1.64
GARNL3-213ENST00000464616 ACVRL1P37023 503 aa4.79□□□□□ -1.64
GARNL3-213ENST00000464616 RPS19P39019 145 aaKnown RBP4.79□□□□□ -1.64
GARNL3-213ENST00000464616 ETV4P43268 484 aa4.79□□□□□ -1.64
GARNL3-213ENST00000464616 TOP3AQ13472 1001 aaPredicted RBP4.79□□□□□ -1.64
GARNL3-213ENST00000464616 RASGRF1Q13972 1273 aa4.79□□□□□ -1.64
GARNL3-213ENST00000464616 FAM209AQ5JX71 171 aa4.79□□□□□ -1.64
GARNL3-213ENST00000464616 CXXC5Q7LFL8 322 aaKnown RBP4.79□□□□□ -1.64
GARNL3-213ENST00000464616 FUKQ8N0W3 1084 aa4.79□□□□□ -1.64
GARNL3-213ENST00000464616 ZBTB38Q8NAP3 1195 aaPredicted RBP4.79□□□□□ -1.64
GARNL3-213ENST00000464616 HIPK4Q8NE63 616 aa4.79□□□□□ -1.64
GARNL3-213ENST00000464616 WWC2-AS2Q96NR7 200 aa4.79□□□□□ -1.64
GARNL3-213ENST00000464616 TANGO6Q9C0B7 1094 aa4.79□□□□□ -1.64
GARNL3-213ENST00000464616 CDC42EP3Q9UKI2 254 aa4.79□□□□□ -1.64
GARNL3-213ENST00000464616 PCDHA9Q9Y5H5 950 aa4.79□□□□□ -1.64
GARNL3-213ENST00000464616 NPIPB8E9PQR5 432 aa4.78□□□□□ -1.64
GARNL3-213ENST00000464616 KCNK3O14649 394 aa4.78□□□□□ -1.64
GARNL3-213ENST00000464616 ARHGAP6O43182 974 aa4.78□□□□□ -1.64
GARNL3-213ENST00000464616 HIP1RO75146 1068 aa4.78□□□□□ -1.64
GARNL3-213ENST00000464616 JAM2P57087 298 aa4.78□□□□□ -1.64
GARNL3-213ENST00000464616 TGFB2P61812 414 aa4.78□□□□□ -1.64
GARNL3-213ENST00000464616 ABHD18Q0P651 414 aa4.78□□□□□ -1.64
GARNL3-213ENST00000464616 FOXE3Q13461 319 aa4.78□□□□□ -1.64
GARNL3-213ENST00000464616 NOLC1Q14978 699 aaKnown RBP eCLIP4.78□□□□□ -1.64
GARNL3-213ENST00000464616 RNF151Q2KHN1 245 aa4.78□□□□□ -1.64
GARNL3-213ENST00000464616 USP30Q70CQ3 517 aa4.78□□□□□ -1.64
GARNL3-213ENST00000464616 Q8N1X5 172 aa4.78□□□□□ -1.64
GARNL3-213ENST00000464616 PCDH19Q8TAB3 1148 aa4.78□□□□□ -1.64
GARNL3-213ENST00000464616 SH3RF2Q8TEC5 729 aa4.78□□□□□ -1.64
GARNL3-213ENST00000464616 SREK1Q8WXA9 508 aaKnown RBP4.78□□□□□ -1.64
GARNL3-213ENST00000464616 DPYSL5Q9BPU6 564 aa4.78□□□□□ -1.64
GARNL3-213ENST00000464616 DHRS4Q9BTZ2 278 aa4.78□□□□□ -1.64
GARNL3-213ENST00000464616 CCDC113Q9H0I3 377 aa4.78□□□□□ -1.64
GARNL3-213ENST00000464616 SLITRK6Q9H5Y7 841 aa4.78□□□□□ -1.64
GARNL3-213ENST00000464616 UCKL1Q9NWZ5 548 aa4.78□□□□□ -1.64
GARNL3-213ENST00000464616 NDOR1Q9UHB4 597 aa4.78□□□□□ -1.64
GARNL3-213ENST00000464616 KDM2BQ8NHM5 1336 aa4.77□□□□□ -1.65
GARNL3-213ENST00000464616 TCRBV5S4A2TA0A5A2 114 aa4.77□□□□□ -1.65
GARNL3-213ENST00000464616 MAN2B1O00754 1011 aa4.77□□□□□ -1.65
GARNL3-213ENST00000464616 SCDO00767 359 aa4.77□□□□□ -1.65
GARNL3-213ENST00000464616 CLASP2O75122 1294 aaKnown RBP4.77□□□□□ -1.65
GARNL3-213ENST00000464616 RAD17O75943 681 aa4.77□□□□□ -1.65
GARNL3-213ENST00000464616 CRTAMO95727 393 aa4.77□□□□□ -1.65
GARNL3-213ENST00000464616 SLPIP03973 132 aa4.77□□□□□ -1.65
GARNL3-213ENST00000464616 MCM7P33993 719 aa4.77□□□□□ -1.65
GARNL3-213ENST00000464616 GTF2F1P35269 517 aaKnown RBP eCLIP4.77□□□□□ -1.65
GARNL3-213ENST00000464616 HERVK_113P62684 666 aa4.77□□□□□ -1.65
GARNL3-213ENST00000464616 IL13RA1P78552 427 aa4.77□□□□□ -1.65
GARNL3-213ENST00000464616 MAP3K12Q12852 859 aa4.77□□□□□ -1.65
GARNL3-213ENST00000464616 R3HDM1Q15032 1099 aaKnown RBP4.77□□□□□ -1.65
GARNL3-213ENST00000464616 NAALADL2Q58DX5 795 aa4.77□□□□□ -1.65
GARNL3-213ENST00000464616 AGBL4Q5VU57 503 aa4.77□□□□□ -1.65
GARNL3-213ENST00000464616 RNF207Q6ZRF8 634 aa4.77□□□□□ -1.65
GARNL3-213ENST00000464616 SGMS1Q86VZ5 419 aa4.77□□□□□ -1.65
GARNL3-213ENST00000464616 C1orf210Q8IVY1 113 aa4.77□□□□□ -1.65
GARNL3-213ENST00000464616 CISD2Q8N5K1 135 aaKnown RBP4.77□□□□□ -1.65
GARNL3-213ENST00000464616 CALML6Q8TD86 181 aa4.77□□□□□ -1.65
GARNL3-213ENST00000464616 EDAQ92838 391 aa4.77□□□□□ -1.65
GARNL3-213ENST00000464616 HIRIP3Q9BW71 556 aaPredicted RBP4.77□□□□□ -1.65
GARNL3-213ENST00000464616 BTBD2Q9BX70 525 aa4.77□□□□□ -1.65
GARNL3-213ENST00000464616 ZDHHC5Q9C0B5 715 aa4.77□□□□□ -1.65
GARNL3-213ENST00000464616 SIRPGQ9P1W8 387 aa4.77□□□□□ -1.65
GARNL3-213ENST00000464616 A0A0G2JNJ9 132 aa4.76□□□□□ -1.65
GARNL3-213ENST00000464616 WNT9AO14904 365 aa4.76□□□□□ -1.65
GARNL3-213ENST00000464616 EFCAB14O75071 495 aa4.76□□□□□ -1.65
GARNL3-213ENST00000464616 AOAHP28039 575 aa4.76□□□□□ -1.65
GARNL3-213ENST00000464616 HIBADHP31937 336 aaKnown RBP4.76□□□□□ -1.65
GARNL3-213ENST00000464616 ECE1P42892 770 aa4.76□□□□□ -1.65
GARNL3-213ENST00000464616 PTH1RQ03431 593 aa4.76□□□□□ -1.65
GARNL3-213ENST00000464616 FHL2Q14192 279 aa4.76□□□□□ -1.65
GARNL3-213ENST00000464616 LSM12Q3MHD2 195 aaKnown RBP4.76□□□□□ -1.65
GARNL3-213ENST00000464616 NBPF6Q5VWK0 638 aa4.76□□□□□ -1.65
GARNL3-213ENST00000464616 FILIP1Q7Z7B0 1213 aa4.76□□□□□ -1.65
GARNL3-213ENST00000464616 UBXN4Q92575 508 aa4.76□□□□□ -1.65
GARNL3-213ENST00000464616 ARMC5Q96C12 935 aa4.76□□□□□ -1.65
GARNL3-213ENST00000464616 MAGEB10Q96LZ2 347 aaPredicted RBP4.76□□□□□ -1.65
GARNL3-213ENST00000464616 NBPF4Q96M43 638 aa4.76□□□□□ -1.65
GARNL3-213ENST00000464616 DRC1Q96MC2 740 aa4.76□□□□□ -1.65
GARNL3-213ENST00000464616 PLEKHG4BQ96PX9 1271 aa4.76□□□□□ -1.65
GARNL3-213ENST00000464616 PLA2G12BQ9BX93 195 aa4.76□□□□□ -1.65
GARNL3-213ENST00000464616 KIAA1683Q9H0B3 1180 aa4.76□□□□□ -1.65
GARNL3-213ENST00000464616 PCED1AQ9H1Q7 454 aa4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms