RNA–Protein interactions for RNA: ENST00000463916.5

XRN1-203, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 1 (best) BASIC

Gene XRN1, Length 2,075 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-203ENST00000463916 MKRN4PQ13434 485 aaPredicted RBP14.67□□□□□ -0.06
XRN1-203ENST00000463916 PLEKHG4Q58EX7 1191 aa14.67□□□□□ -0.06
XRN1-203ENST00000463916 LRCH2Q5VUJ6 765 aa14.67□□□□□ -0.06
XRN1-203ENST00000463916 TAF2Q6P1X5 1199 aa14.67□□□□□ -0.06
XRN1-203ENST00000463916 SMAP1Q8IYB5 467 aaPredicted RBP14.67□□□□□ -0.06
XRN1-203ENST00000463916 ATP8B4Q8TF62 1192 aa14.67□□□□□ -0.06
XRN1-203ENST00000463916 UNC45AQ9H3U1 944 aa14.67□□□□□ -0.06
XRN1-203ENST00000463916 GABBR1Q9UBS5 961 aa14.67□□□□□ -0.06
XRN1-203ENST00000463916 STXBP5LQ9Y2K9 1186 aa14.67□□□□□ -0.06
XRN1-203ENST00000463916 SAMM50Q9Y512 469 aa14.67□□□□□ -0.06
XRN1-203ENST00000463916 RRN3P2A6NIE6 340 aa14.67□□□□□ -0.06
XRN1-203ENST00000463916 GAS7O60861 476 aa14.67□□□□□ -0.06
XRN1-203ENST00000463916 MGAT3Q09327 533 aa14.67□□□□□ -0.06
XRN1-203ENST00000463916 FAM160B1Q5W0V3 765 aa14.67□□□□□ -0.06
XRN1-203ENST00000463916 B3GNT9Q6UX72 402 aa14.67□□□□□ -0.06
XRN1-203ENST00000463916 LIN28BQ6ZN17 250 aaKnown RBP eCLIP14.67□□□□□ -0.06
XRN1-203ENST00000463916 HERC6Q8IVU3 1022 aa14.67□□□□□ -0.06
XRN1-203ENST00000463916 MYLIPQ8WY64 445 aa14.67□□□□□ -0.06
XRN1-203ENST00000463916 FAM49AQ9H0Q0 323 aaPredicted RBP14.67□□□□□ -0.06
XRN1-203ENST00000463916 DISC1Q9NRI5 854 aa14.67□□□□□ -0.06
XRN1-203ENST00000463916 DDX25Q9UHL0 483 aaKnown RBP14.67□□□□□ -0.06
XRN1-203ENST00000463916 MSRAQ9UJ68 235 aa14.67□□□□□ -0.06
XRN1-203ENST00000463916 TMEM265A0A087WTH1 108 aa14.66□□□□□ -0.06
XRN1-203ENST00000463916 BTBD18B2RXH4 712 aa14.66□□□□□ -0.06
XRN1-203ENST00000463916 ZNF862O60290 1169 aa14.66□□□□□ -0.06
XRN1-203ENST00000463916 MMP1P03956 469 aa14.66□□□□□ -0.06
XRN1-203ENST00000463916 PSAPP07602 524 aa14.66□□□□□ -0.06
XRN1-203ENST00000463916 KRT2P35908 639 aa14.66□□□□□ -0.06
XRN1-203ENST00000463916 RAB30Q15771 203 aa14.66□□□□□ -0.06
XRN1-203ENST00000463916 UGCGQ16739 394 aa14.66□□□□□ -0.06
XRN1-203ENST00000463916 KRT40Q6A162 431 aa14.66□□□□□ -0.06
XRN1-203ENST00000463916 MTHFD1LQ6UB35 978 aa14.66□□□□□ -0.06
XRN1-203ENST00000463916 MOXD1Q6UVY6 613 aa14.66□□□□□ -0.06
XRN1-203ENST00000463916 NEK8Q86SG6 692 aa14.66□□□□□ -0.06
XRN1-203ENST00000463916 PHOSPHO2Q8TCD6 241 aa14.66□□□□□ -0.06
XRN1-203ENST00000463916 SLC9A7Q96T83 725 aa14.66□□□□□ -0.06
XRN1-203ENST00000463916 PCDHA2Q9Y5H9 948 aa14.66□□□□□ -0.06
XRN1-203ENST00000463916 SIP14410 1827 aa14.66□□□□□ -0.06
XRN1-203ENST00000463916 ABHD14A-ACY1A0A1B0GW23 586 aa14.65□□□□□ -0.06
XRN1-203ENST00000463916 WDR64B1ANS9 1081 aa14.65□□□□□ -0.06
XRN1-203ENST00000463916 HBP1O60381 514 aa14.65□□□□□ -0.06
XRN1-203ENST00000463916 ARHGEF15O94989 841 aa14.65□□□□□ -0.06
XRN1-203ENST00000463916 KLRC1P26715 233 aa14.65□□□□□ -0.06
XRN1-203ENST00000463916 TMEM62Q0P6H9 643 aa14.65□□□□□ -0.06
XRN1-203ENST00000463916 IKBKEQ14164 716 aa14.65□□□□□ -0.06
XRN1-203ENST00000463916 PPP4R3AQ6IN85 833 aa14.65□□□□□ -0.06
XRN1-203ENST00000463916 TEKT3Q9BXF9 490 aa14.65□□□□□ -0.06
XRN1-203ENST00000463916 PCDHA11Q9Y5I1 949 aa14.65□□□□□ -0.06
XRN1-203ENST00000463916 VCANP13611 3396 aa14.65□□□□□ -0.06
XRN1-203ENST00000463916 WNT7AO00755 349 aa14.65□□□□□ -0.06
XRN1-203ENST00000463916 CCNT1O60563 726 aaKnown RBP14.65□□□□□ -0.06
XRN1-203ENST00000463916 CD2BP2O95400 341 aaKnown RBP14.65□□□□□ -0.06
XRN1-203ENST00000463916 CA3P07451 260 aa14.65□□□□□ -0.06
XRN1-203ENST00000463916 GUCY1B3Q02153 619 aa14.65□□□□□ -0.06
XRN1-203ENST00000463916 CKAP2LQ8IYA6 745 aa14.65□□□□□ -0.06
XRN1-203ENST00000463916 HAS1Q92839 578 aa14.65□□□□□ -0.06
XRN1-203ENST00000463916 SLC28A3Q9HAS3 691 aa14.65□□□□□ -0.06
XRN1-203ENST00000463916 KCNMB3Q9NPA1 279 aa14.65□□□□□ -0.06
XRN1-203ENST00000463916 CDY2AQ9Y6F7 541 aa14.65□□□□□ -0.06
XRN1-203ENST00000463916 XIRP2A4UGR9 3374 aa14.65□□□□□ -0.06
XRN1-203ENST00000463916 WDR81Q562E7 1941 aa14.65□□□□□ -0.06
XRN1-203ENST00000463916 IGSF9BQ9UPX0 1349 aa14.65□□□□□ -0.06
XRN1-203ENST00000463916 GHRP10912 638 aa14.64□□□□□ -0.07
XRN1-203ENST00000463916 KCNJ6P48051 423 aa14.64□□□□□ -0.07
XRN1-203ENST00000463916 LPIN1Q14693 890 aa14.64□□□□□ -0.07
XRN1-203ENST00000463916 DIS3L2Q8IYB7 885 aaKnown RBP14.64□□□□□ -0.07
XRN1-203ENST00000463916 TNPO1Q92973 898 aaKnown RBP14.64□□□□□ -0.07
XRN1-203ENST00000463916 ZSCAN31Q96LW9 406 aaPredicted RBP14.64□□□□□ -0.07
XRN1-203ENST00000463916 TCEAL9Q9UHQ7 104 aa14.64□□□□□ -0.07
XRN1-203ENST00000463916 MYH9P35579 1960 aaKnown RBP14.64□□□□□ -0.07
XRN1-203ENST00000463916 MRPS6P82932 125 aaKnown RBP14.64□□□□□ -0.07
XRN1-203ENST00000463916 RABEP1Q15276 862 aa14.64□□□□□ -0.07
XRN1-203ENST00000463916 SPRED2Q7Z698 418 aa14.64□□□□□ -0.07
XRN1-203ENST00000463916 KIAA0319LQ8IZA0 1049 aa14.64□□□□□ -0.07
XRN1-203ENST00000463916 BBXQ8WY36 941 aaPredicted RBP14.64□□□□□ -0.07
XRN1-203ENST00000463916 LLPHQ9BRT6 129 aaKnown RBP14.64□□□□□ -0.07
XRN1-203ENST00000463916 IFIH1Q9BYX4 1025 aaKnown RBP14.64□□□□□ -0.07
XRN1-203ENST00000463916 PRDM12Q9H4Q4 367 aa14.64□□□□□ -0.07
XRN1-203ENST00000463916 AGO3Q9H9G7 860 aaKnown RBP14.64□□□□□ -0.07
XRN1-203ENST00000463916 VAV3Q9UKW4 847 aa14.64□□□□□ -0.07
XRN1-203ENST00000463916 MYO9BQ13459 2157 aa14.63□□□□□ -0.07
XRN1-203ENST00000463916 SMIM35A0A1B0GVV1 85 aa14.63□□□□□ -0.07
XRN1-203ENST00000463916 LCHNA4D1U4 455 aa14.63□□□□□ -0.07
XRN1-203ENST00000463916 EML1O00423 815 aa14.63□□□□□ -0.07
XRN1-203ENST00000463916 SFNP31947 248 aa14.63□□□□□ -0.07
XRN1-203ENST00000463916 ZNF484Q5JVG2 852 aa14.63□□□□□ -0.07
XRN1-203ENST00000463916 FBXO47Q5MNV8 452 aa14.63□□□□□ -0.07
XRN1-203ENST00000463916 FAM117BQ6P1L5 589 aa14.63□□□□□ -0.07
XRN1-203ENST00000463916 RSPH3Q86UC2 560 aa14.63□□□□□ -0.07
XRN1-203ENST00000463916 POTEDQ86YR6 584 aa14.63□□□□□ -0.07
XRN1-203ENST00000463916 SEPT8Q92599 483 aa14.63□□□□□ -0.07
XRN1-203ENST00000463916 TBC1D32Q96NH3 1257 aa14.63□□□□□ -0.07
XRN1-203ENST00000463916 SH2B1Q9NRF2 756 aaPredicted RBP14.63□□□□□ -0.07
XRN1-203ENST00000463916 LOC101059915A0A1B0GWI6 518 aaPredicted RBP14.62□□□□□ -0.07
XRN1-203ENST00000463916 TMEM150BA6NC51 233 aa14.62□□□□□ -0.07
XRN1-203ENST00000463916 GJB5O95377 273 aa14.62□□□□□ -0.07
XRN1-203ENST00000463916 C22orf31O95567 290 aa14.62□□□□□ -0.07
XRN1-203ENST00000463916 JAK3P52333 1124 aa14.62□□□□□ -0.07
XRN1-203ENST00000463916 PRKCEQ02156 737 aa14.62□□□□□ -0.07
XRN1-203ENST00000463916 TRIM29Q14134 588 aa14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 124.7 ms