RNA–Protein interactions for RNA: ENST00000463753.5

COL8A1-205, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL8A1, Length 2,964 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-205ENST00000463753 SLTMQ9NWH9 1034 aaKnown RBP eCLIP3.94□□□□□ -1.78
COL8A1-205ENST00000463753 TFCP2L1Q9NZI6 479 aa3.94□□□□□ -1.78
COL8A1-205ENST00000463753 PNMA2Q9UL42 364 aa3.94□□□□□ -1.78
COL8A1-205ENST00000463753 TMCO1Q9UM00 188 aa3.94□□□□□ -1.78
COL8A1-205ENST00000463753 CEP131Q9UPN4 1083 aa3.94□□□□□ -1.78
COL8A1-205ENST00000463753 SPG7Q9UQ90 795 aa3.94□□□□□ -1.78
COL8A1-205ENST00000463753 MTMR7Q9Y216 660 aa3.94□□□□□ -1.78
COL8A1-205ENST00000463753 PLAAQ9Y263 795 aa3.94□□□□□ -1.78
COL8A1-205ENST00000463753 EFR3BQ9Y2G0 817 aa3.94□□□□□ -1.78
COL8A1-205ENST00000463753 SH3GLB1Q9Y371 365 aa3.94□□□□□ -1.78
COL8A1-205ENST00000463753 GOLGA6L10A0A0M3HER8 536 aa3.94□□□□□ -1.78
COL8A1-205ENST00000463753 GMNCA6NCL1 334 aa3.94□□□□□ -1.78
COL8A1-205ENST00000463753 TMEM110-MUSTN1A8MSY1 372 aa3.94□□□□□ -1.78
COL8A1-205ENST00000463753 PHF20L1A8MW92 1017 aa3.94□□□□□ -1.78
COL8A1-205ENST00000463753 MAGEB3O15480 346 aa3.94□□□□□ -1.78
COL8A1-205ENST00000463753 FGFR1OPO95684 399 aaKnown RBP3.94□□□□□ -1.78
COL8A1-205ENST00000463753 GNA14O95837 355 aa3.94□□□□□ -1.78
COL8A1-205ENST00000463753 PDCP20941 246 aa3.94□□□□□ -1.78
COL8A1-205ENST00000463753 CCND1P24385 295 aa3.94□□□□□ -1.78
COL8A1-205ENST00000463753 TMOD1P28289 359 aa3.94□□□□□ -1.78
COL8A1-205ENST00000463753 SAFB2Q14151 953 aaKnown RBP eCLIP3.94□□□□□ -1.78
COL8A1-205ENST00000463753 KRT24Q2M2I5 525 aa3.94□□□□□ -1.78
COL8A1-205ENST00000463753 FAM117BQ6P1L5 589 aa3.94□□□□□ -1.78
COL8A1-205ENST00000463753 PACS1Q6VY07 963 aa3.94□□□□□ -1.78
COL8A1-205ENST00000463753 CCNI2Q6ZMN8 369 aaPredicted RBP3.94□□□□□ -1.78
COL8A1-205ENST00000463753 ZBTB33Q86T24 672 aa3.94□□□□□ -1.78
COL8A1-205ENST00000463753 MAP7D3Q8IWC1 876 aa3.94□□□□□ -1.78
COL8A1-205ENST00000463753 PEX5LQ8IYB4 626 aa3.94□□□□□ -1.78
COL8A1-205ENST00000463753 SAMD3Q8N6K7 520 aa3.94□□□□□ -1.78
COL8A1-205ENST00000463753 WDR60Q8WVS4 1066 aa3.94□□□□□ -1.78
COL8A1-205ENST00000463753 SREK1Q8WXA9 508 aaKnown RBP3.94□□□□□ -1.78
COL8A1-205ENST00000463753 ZIM3Q96PE6 472 aa3.94□□□□□ -1.78
COL8A1-205ENST00000463753 DMAP1Q9NPF5 467 aaPredicted RBP3.94□□□□□ -1.78
COL8A1-205ENST00000463753 DDX21Q9NR30 783 aaKnown RBP eCLIP3.94□□□□□ -1.78
COL8A1-205ENST00000463753 INIPQ9NRY2 104 aa3.94□□□□□ -1.78
COL8A1-205ENST00000463753 ETNK2Q9NVF9 386 aa3.94□□□□□ -1.78
COL8A1-205ENST00000463753 RNF181Q9P0P0 153 aa3.94□□□□□ -1.78
COL8A1-205ENST00000463753 SUCLA2Q9P2R7 463 aaPredicted RBP3.94□□□□□ -1.78
COL8A1-205ENST00000463753 CROTQ9UKG9 612 aa3.94□□□□□ -1.78
COL8A1-205ENST00000463753 GUCA1BQ9UMX6 200 aa3.94□□□□□ -1.78
COL8A1-205ENST00000463753 TDRKHQ9Y2W6 561 aaKnown RBP3.94□□□□□ -1.78
COL8A1-205ENST00000463753 TSC22D4Q9Y3Q8 395 aa3.94□□□□□ -1.78
COL8A1-205ENST00000463753 HEY1Q9Y5J3 304 aa3.94□□□□□ -1.78
COL8A1-205ENST00000463753 SYNRGQ9UMZ2 1314 aa3.94□□□□□ -1.78
COL8A1-205ENST00000463753 VIMP08670 466 aaKnown RBP3.93□□□□□ -1.78
COL8A1-205ENST00000463753 HARSP12081 509 aaKnown RBP3.93□□□□□ -1.78
COL8A1-205ENST00000463753 HOXA10P31260 410 aaPredicted RBP3.93□□□□□ -1.78
COL8A1-205ENST00000463753 MTHFSP49914 203 aa3.93□□□□□ -1.78
COL8A1-205ENST00000463753 ALDH5A1P51649 535 aaPredicted RBP3.93□□□□□ -1.78
COL8A1-205ENST00000463753 ATP11AP98196 1134 aa3.93□□□□□ -1.78
COL8A1-205ENST00000463753 ST3GAL1Q11201 340 aa3.93□□□□□ -1.78
COL8A1-205ENST00000463753 FOXB2Q5VYV0 432 aa3.93□□□□□ -1.78
COL8A1-205ENST00000463753 STYK1Q6J9G0 422 aa3.93□□□□□ -1.78
COL8A1-205ENST00000463753 RAD9BQ6WBX8 426 aa3.93□□□□□ -1.78
COL8A1-205ENST00000463753 KDM7AQ6ZMT4 941 aa3.93□□□□□ -1.78
COL8A1-205ENST00000463753 CCNJLQ8IV13 435 aa3.93□□□□□ -1.78
COL8A1-205ENST00000463753 CYP4X1Q8N118 509 aa3.93□□□□□ -1.78
COL8A1-205ENST00000463753 TC2NQ8N9U0 490 aa3.93□□□□□ -1.78
COL8A1-205ENST00000463753 LINS1Q8NG48 757 aa3.93□□□□□ -1.78
COL8A1-205ENST00000463753 ERMNQ8TAM6 284 aa3.93□□□□□ -1.78
COL8A1-205ENST00000463753 ADAMTS19Q8TE59 1207 aa3.93□□□□□ -1.78
COL8A1-205ENST00000463753 FBF1Q8TES7 1133 aa3.93□□□□□ -1.78
COL8A1-205ENST00000463753 UCMAQ8WVF2 138 aa3.93□□□□□ -1.78
COL8A1-205ENST00000463753 PPP1R14BQ96C90 147 aa3.93□□□□□ -1.78
COL8A1-205ENST00000463753 HIC2Q96JB3 615 aa3.93□□□□□ -1.78
COL8A1-205ENST00000463753 CCDC43Q96MW1 224 aaKnown RBP3.93□□□□□ -1.78
COL8A1-205ENST00000463753 MPHOSPH6Q99547 160 aaKnown RBP3.93□□□□□ -1.78
COL8A1-205ENST00000463753 SLC39A3Q9BRY0 314 aa3.93□□□□□ -1.78
COL8A1-205ENST00000463753 PAGR1Q9BTK6 254 aa3.93□□□□□ -1.78
COL8A1-205ENST00000463753 NDEL1Q9GZM8 345 aa3.93□□□□□ -1.78
COL8A1-205ENST00000463753 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP3.93□□□□□ -1.78
COL8A1-205ENST00000463753 SCOCQ9UIL1 159 aa3.93□□□□□ -1.78
COL8A1-205ENST00000463753 HACL1Q9UJ83 578 aa3.93□□□□□ -1.78
COL8A1-205ENST00000463753 RASAL2Q9UJF2 1139 aa3.93□□□□□ -1.78
COL8A1-205ENST00000463753 INTUQ9ULD6 942 aa3.93□□□□□ -1.78
COL8A1-205ENST00000463753 ZMYND8Q9ULU4 1186 aaPredicted RBP3.93□□□□□ -1.78
COL8A1-205ENST00000463753 ECM29Q5VYK3 1845 aa3.93□□□□□ -1.78
COL8A1-205ENST00000463753 HTR3EA5X5Y0 456 aa3.93□□□□□ -1.78
COL8A1-205ENST00000463753 MAGEA13PA6NCF6 341 aa3.93□□□□□ -1.78
COL8A1-205ENST00000463753 H0Y3Z8 333 aa3.93□□□□□ -1.78
COL8A1-205ENST00000463753 HIP1RO75146 1068 aa3.93□□□□□ -1.78
COL8A1-205ENST00000463753 CSPG5O95196 566 aa3.93□□□□□ -1.78
COL8A1-205ENST00000463753 SLC3A2P08195 630 aaKnown RBP3.93□□□□□ -1.78
COL8A1-205ENST00000463753 NEK2P51955 445 aa3.93□□□□□ -1.78
COL8A1-205ENST00000463753 RAD23BP54727 409 aa3.93□□□□□ -1.78
COL8A1-205ENST00000463753 MTTPP55157 894 aa3.93□□□□□ -1.78
COL8A1-205ENST00000463753 ARPC4P59998 168 aa3.93□□□□□ -1.78
COL8A1-205ENST00000463753 DHX9Q08211 1270 aaKnown RBP3.93□□□□□ -1.78
COL8A1-205ENST00000463753 LRP8Q14114 963 aa3.93□□□□□ -1.78
COL8A1-205ENST00000463753 ADCK5Q3MIX3 580 aa3.93□□□□□ -1.78
COL8A1-205ENST00000463753 CFAP58Q5T655 872 aa3.93□□□□□ -1.78
COL8A1-205ENST00000463753 DUS1LQ6P1R4 473 aaKnown RBP3.93□□□□□ -1.78
COL8A1-205ENST00000463753 SLC2A7Q6PXP3 512 aa3.93□□□□□ -1.78
COL8A1-205ENST00000463753 DAAM2Q86T65 1068 aa3.93□□□□□ -1.78
COL8A1-205ENST00000463753 ZNF554Q86TJ5 538 aa3.93□□□□□ -1.78
COL8A1-205ENST00000463753 ARHGEF25Q86VW2 580 aa3.93□□□□□ -1.78
COL8A1-205ENST00000463753 FAM133AQ8N9E0 248 aa3.93□□□□□ -1.78
COL8A1-205ENST00000463753 SERBP1Q8NC51 408 aaKnown RBP eCLIP3.93□□□□□ -1.78
COL8A1-205ENST00000463753 DEPTORQ8TB45 409 aa3.93□□□□□ -1.78
COL8A1-205ENST00000463753 HDAC7Q8WUI4 952 aa3.93□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms