RNA–Protein interactions for RNA: ENST00000463513.5

GPATCH4-204, Transcript of G-patch domain containing 4, humanhuman

TSL 3

Gene GPATCH4, Length 857 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPATCH4-204ENST00000463513 CAGE1Q8TC20 777 aa11.25□□□□□ -0.61
GPATCH4-204ENST00000463513 NEK9Q8TD19 979 aa11.25□□□□□ -0.61
GPATCH4-204ENST00000463513 BBXQ8WY36 941 aaPredicted RBP11.25□□□□□ -0.61
GPATCH4-204ENST00000463513 MTMR9Q96QG7 549 aa11.25□□□□□ -0.61
GPATCH4-204ENST00000463513 LXNQ9BS40 222 aa11.25□□□□□ -0.61
GPATCH4-204ENST00000463513 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.25□□□□□ -0.61
GPATCH4-204ENST00000463513 NRBP2Q9NSY0 501 aa11.25□□□□□ -0.61
GPATCH4-204ENST00000463513 MAFBQ9Y5Q3 323 aaPredicted RBP11.25□□□□□ -0.61
GPATCH4-204ENST00000463513 COL1A2P08123 1366 aa11.25□□□□□ -0.61
GPATCH4-204ENST00000463513 TRIM43BA6NCK2 446 aa11.24□□□□□ -0.61
GPATCH4-204ENST00000463513 EML1O00423 815 aa11.24□□□□□ -0.61
GPATCH4-204ENST00000463513 TREHO43280 583 aa11.24□□□□□ -0.61
GPATCH4-204ENST00000463513 TIMP1P01033 207 aa11.24□□□□□ -0.61
GPATCH4-204ENST00000463513 P4HBP07237 508 aaKnown RBP11.24□□□□□ -0.61
GPATCH4-204ENST00000463513 ZSCAN22P10073 491 aaPredicted RBP11.24□□□□□ -0.61
GPATCH4-204ENST00000463513 ZNF200P98182 395 aaPredicted RBP11.24□□□□□ -0.61
GPATCH4-204ENST00000463513 ZNF484Q5JVG2 852 aa11.24□□□□□ -0.61
GPATCH4-204ENST00000463513 TAF2Q6P1X5 1199 aa11.24□□□□□ -0.61
GPATCH4-204ENST00000463513 TMEM199Q8N511 208 aa11.24□□□□□ -0.61
GPATCH4-204ENST00000463513 TRAPPC12Q8WVT3 735 aa11.24□□□□□ -0.61
GPATCH4-204ENST00000463513 TRIM43Q96BQ3 446 aaPredicted RBP11.24□□□□□ -0.61
GPATCH4-204ENST00000463513 DYDC2Q96IM9 177 aa11.24□□□□□ -0.61
GPATCH4-204ENST00000463513 ZNF396Q96N95 335 aaPredicted RBP11.24□□□□□ -0.61
GPATCH4-204ENST00000463513 EIF2AK1Q9BQI3 630 aaKnown RBP11.24□□□□□ -0.61
GPATCH4-204ENST00000463513 NOC4LQ9BVI4 516 aaKnown RBP11.24□□□□□ -0.61
GPATCH4-204ENST00000463513 STK24Q9Y6E0 443 aa11.24□□□□□ -0.61
GPATCH4-204ENST00000463513 TCHHQ07283 1943 aa11.23□□□□□ -0.61
GPATCH4-204ENST00000463513 VWA3AA6NCI4 1184 aa11.23□□□□□ -0.61
GPATCH4-204ENST00000463513 DDX11L8A8MPP1 907 aa11.23□□□□□ -0.61
GPATCH4-204ENST00000463513 M0QZ92 97 aa11.23□□□□□ -0.61
GPATCH4-204ENST00000463513 PITPNM1O00562 1244 aa11.23□□□□□ -0.61
GPATCH4-204ENST00000463513 F13A1P00488 732 aa11.23□□□□□ -0.61
GPATCH4-204ENST00000463513 CTSHP09668 335 aa11.23□□□□□ -0.61
GPATCH4-204ENST00000463513 CYP2C18P33260 490 aa11.23□□□□□ -0.61
GPATCH4-204ENST00000463513 THPOP40225 353 aa11.23□□□□□ -0.61
GPATCH4-204ENST00000463513 PRPHP41219 470 aa11.23□□□□□ -0.61
GPATCH4-204ENST00000463513 MAGEA10P43363 369 aaPredicted RBP11.23□□□□□ -0.61
GPATCH4-204ENST00000463513 FXR2P51116 673 aaKnown RBP eCLIP11.23□□□□□ -0.61
GPATCH4-204ENST00000463513 CCL23P55773 120 aa11.23□□□□□ -0.61
GPATCH4-204ENST00000463513 ATP2C1P98194 919 aaPredicted RBP11.23□□□□□ -0.61
GPATCH4-204ENST00000463513 CEBPZQ03701 1054 aaKnown RBP11.23□□□□□ -0.61
GPATCH4-204ENST00000463513 FPGSQ05932 587 aa11.23□□□□□ -0.61
GPATCH4-204ENST00000463513 SPIRE1Q08AE8 756 aa11.23□□□□□ -0.61
GPATCH4-204ENST00000463513 TBC1D8BQ0IIM8 1120 aa11.23□□□□□ -0.61
GPATCH4-204ENST00000463513 PPIGQ13427 754 aaKnown RBP eCLIP11.23□□□□□ -0.61
GPATCH4-204ENST00000463513 CTTNQ14247 550 aaKnown RBP11.23□□□□□ -0.61
GPATCH4-204ENST00000463513 SF3A1Q15459 793 aaKnown RBP11.23□□□□□ -0.61
GPATCH4-204ENST00000463513 FOXD4L6Q3SYB3 417 aaPredicted RBP11.23□□□□□ -0.61
GPATCH4-204ENST00000463513 MTERF2Q49AM1 385 aa11.23□□□□□ -0.61
GPATCH4-204ENST00000463513 XKR3Q5GH77 459 aa11.23□□□□□ -0.61
GPATCH4-204ENST00000463513 B3GNT9Q6UX72 402 aa11.23□□□□□ -0.61
GPATCH4-204ENST00000463513 FOXD4L3Q6VB84 417 aaPredicted RBP11.23□□□□□ -0.61
GPATCH4-204ENST00000463513 SERINC5Q86VE9 423 aa11.23□□□□□ -0.61
GPATCH4-204ENST00000463513 TPH2Q8IWU9 490 aa11.23□□□□□ -0.61
GPATCH4-204ENST00000463513 RASSF8Q8NHQ8 419 aa11.23□□□□□ -0.61
GPATCH4-204ENST00000463513 SNX29Q8TEQ0 813 aa11.23□□□□□ -0.61
GPATCH4-204ENST00000463513 BADQ92934 168 aa11.23□□□□□ -0.61
GPATCH4-204ENST00000463513 FAM49AQ9H0Q0 323 aaPredicted RBP11.23□□□□□ -0.61
GPATCH4-204ENST00000463513 ZSWIM4Q9H7M6 989 aa11.23□□□□□ -0.61
GPATCH4-204ENST00000463513 RGL1Q9NZL6 768 aa11.23□□□□□ -0.61
GPATCH4-204ENST00000463513 LRWD1Q9UFC0 647 aa11.23□□□□□ -0.61
GPATCH4-204ENST00000463513 SIP14410 1827 aa11.23□□□□□ -0.61
GPATCH4-204ENST00000463513 ZNF862O60290 1169 aa11.22□□□□□ -0.61
GPATCH4-204ENST00000463513 RPLP2P05387 115 aaKnown RBP11.22□□□□□ -0.61
GPATCH4-204ENST00000463513 SELPP16109 830 aa11.22□□□□□ -0.61
GPATCH4-204ENST00000463513 HOXC8P31273 242 aa11.22□□□□□ -0.61
GPATCH4-204ENST00000463513 MYH11P35749 1972 aa11.22□□□□□ -0.61
GPATCH4-204ENST00000463513 CCT6AP40227 531 aaKnown RBP11.22□□□□□ -0.61
GPATCH4-204ENST00000463513 STK38Q15208 465 aa11.22□□□□□ -0.61
GPATCH4-204ENST00000463513 ZRSR1Q15695 479 aaKnown RBP11.22□□□□□ -0.61
GPATCH4-204ENST00000463513 KRT79Q5XKE5 535 aa11.22□□□□□ -0.61
GPATCH4-204ENST00000463513 ARL6IP4Q66PJ3 421 aaKnown RBP11.22□□□□□ -0.61
GPATCH4-204ENST00000463513 PLA2G4FQ68DD2 849 aa11.22□□□□□ -0.61
GPATCH4-204ENST00000463513 FAM173BQ6P4H8 233 aa11.22□□□□□ -0.61
GPATCH4-204ENST00000463513 CHRDL2Q6WN34 429 aa11.22□□□□□ -0.61
GPATCH4-204ENST00000463513 LRRC8DQ7L1W4 858 aa11.22□□□□□ -0.61
GPATCH4-204ENST00000463513 OTUD6AQ7L8S5 288 aa11.22□□□□□ -0.61
GPATCH4-204ENST00000463513 METTL13Q8N6R0 699 aa11.22□□□□□ -0.61
GPATCH4-204ENST00000463513 CDK5RAP3Q96JB5 506 aa11.22□□□□□ -0.61
GPATCH4-204ENST00000463513 SCLT1Q96NL6 688 aa11.22□□□□□ -0.61
GPATCH4-204ENST00000463513 MAP7D2Q96T17 732 aa11.22□□□□□ -0.61
GPATCH4-204ENST00000463513 UBE2OQ9C0C9 1292 aaKnown RBP11.22□□□□□ -0.61
GPATCH4-204ENST00000463513 TUFT1Q9NNX1 390 aa11.22□□□□□ -0.61
GPATCH4-204ENST00000463513 PCDH10Q9P2E7 1040 aa11.22□□□□□ -0.61
GPATCH4-204ENST00000463513 UMODL1Q5DID0 1318 aa11.21□□□□□ -0.61
GPATCH4-204ENST00000463513 KDM3AQ9Y4C1 1321 aa11.21□□□□□ -0.61
GPATCH4-204ENST00000463513 MAGEB2O15479 319 aa11.21□□□□□ -0.61
GPATCH4-204ENST00000463513 CAND2O75155 1236 aa11.21□□□□□ -0.61
GPATCH4-204ENST00000463513 CKBP12277 381 aa11.21□□□□□ -0.61
GPATCH4-204ENST00000463513 NCLP19338 710 aaKnown RBP11.21□□□□□ -0.61
GPATCH4-204ENST00000463513 ATP4AP20648 1035 aa11.21□□□□□ -0.61
GPATCH4-204ENST00000463513 KLRC1P26715 233 aa11.21□□□□□ -0.61
GPATCH4-204ENST00000463513 TMOD1P28289 359 aa11.21□□□□□ -0.61
GPATCH4-204ENST00000463513 YWHABP31946 246 aaKnown RBP11.21□□□□□ -0.61
GPATCH4-204ENST00000463513 POLGP54098 1239 aaPredicted RBP11.21□□□□□ -0.61
GPATCH4-204ENST00000463513 PKP1Q13835 747 aa11.21□□□□□ -0.61
GPATCH4-204ENST00000463513 HIC1Q14526 733 aa11.21□□□□□ -0.61
GPATCH4-204ENST00000463513 XKR9Q5GH70 373 aa11.21□□□□□ -0.61
GPATCH4-204ENST00000463513 MFSD5Q6N075 450 aa11.21□□□□□ -0.61
GPATCH4-204ENST00000463513 MTHFD1LQ6UB35 978 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms