RNA–Protein interactions for RNA: ENST00000463486.5

VPS52-214, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 925 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-214ENST00000463486 CCDC155Q8N6L0 562 aa19.94■□□□□ 0.78
VPS52-214ENST00000463486 RETREG2Q8NC44 543 aa19.94■□□□□ 0.78
VPS52-214ENST00000463486 OSBPL7Q9BZF2 842 aa19.94■□□□□ 0.78
VPS52-214ENST00000463486 TUBE1Q9UJT0 475 aa19.94■□□□□ 0.78
VPS52-214ENST00000463486 TRPC6Q9Y210 931 aa19.94■□□□□ 0.78
VPS52-214ENST00000463486 SAMM50Q9Y512 469 aa19.94■□□□□ 0.78
VPS52-214ENST00000463486 KAT6AQ92794 2004 aa19.93■□□□□ 0.78
VPS52-214ENST00000463486 TANC1Q9C0D5 1861 aa19.93■□□□□ 0.78
VPS52-214ENST00000463486 SOX1O00570 391 aaPredicted RBP19.93■□□□□ 0.78
VPS52-214ENST00000463486 HBP1O60381 514 aa19.93■□□□□ 0.78
VPS52-214ENST00000463486 NEMFO60524 1076 aa19.93■□□□□ 0.78
VPS52-214ENST00000463486 NBNO60934 754 aa19.93■□□□□ 0.78
VPS52-214ENST00000463486 RFC2P35250 354 aa19.93■□□□□ 0.78
VPS52-214ENST00000463486 NBR1Q14596 966 aa19.93■□□□□ 0.78
VPS52-214ENST00000463486 ZNF174Q15697 407 aa19.93■□□□□ 0.78
VPS52-214ENST00000463486 CALCRLQ16602 461 aa19.93■□□□□ 0.78
VPS52-214ENST00000463486 LRRC8DQ7L1W4 858 aa19.93■□□□□ 0.78
VPS52-214ENST00000463486 BBXQ8WY36 941 aaPredicted RBP19.93■□□□□ 0.78
VPS52-214ENST00000463486 WRAP73Q9P2S5 460 aaPredicted RBP19.93■□□□□ 0.78
VPS52-214ENST00000463486 CAND2O75155 1236 aa19.92■□□□□ 0.78
VPS52-214ENST00000463486 CXCL10P02778 98 aa19.92■□□□□ 0.78
VPS52-214ENST00000463486 MCM7P33993 719 aa19.92■□□□□ 0.78
VPS52-214ENST00000463486 THPOP40225 353 aa19.92■□□□□ 0.78
VPS52-214ENST00000463486 FXR1P51114 621 aaKnown RBP eCLIP19.92■□□□□ 0.78
VPS52-214ENST00000463486 IGBP1P78318 339 aa19.92■□□□□ 0.78
VPS52-214ENST00000463486 ORC2Q13416 577 aaPredicted RBP19.92■□□□□ 0.78
VPS52-214ENST00000463486 TCTN1Q2MV58 587 aa19.92■□□□□ 0.78
VPS52-214ENST00000463486 ZNF484Q5JVG2 852 aa19.92■□□□□ 0.78
VPS52-214ENST00000463486 FAM26DQ5JW98 314 aa19.92■□□□□ 0.78
VPS52-214ENST00000463486 TTC38Q5R3I4 469 aa19.92■□□□□ 0.78
VPS52-214ENST00000463486 MTHFD1LQ6UB35 978 aa19.92■□□□□ 0.78
VPS52-214ENST00000463486 CEP89Q96ST8 783 aa19.92■□□□□ 0.78
VPS52-214ENST00000463486 TCEAL9Q9UHQ7 104 aa19.92■□□□□ 0.78
VPS52-214ENST00000463486 PCDHA2Q9Y5H9 948 aa19.92■□□□□ 0.78
VPS52-214ENST00000463486 COL1A2P08123 1366 aa19.92■□□□□ 0.78
VPS52-214ENST00000463486 MYH9P35579 1960 aaKnown RBP19.92■□□□□ 0.78
VPS52-214ENST00000463486 OATP04181 439 aa19.91■□□□□ 0.78
VPS52-214ENST00000463486 EPHA7Q15375 998 aa19.91■□□□□ 0.78
VPS52-214ENST00000463486 TARBP2Q15633 366 aaKnown RBP19.91■□□□□ 0.78
VPS52-214ENST00000463486 TAF2Q6P1X5 1199 aa19.91■□□□□ 0.78
VPS52-214ENST00000463486 HERVK_113Q902F9 699 aa19.91■□□□□ 0.78
VPS52-214ENST00000463486 TNPO1Q92973 898 aaKnown RBP19.91■□□□□ 0.78
VPS52-214ENST00000463486 TTC12Q9H892 705 aaPredicted RBP19.91■□□□□ 0.78
VPS52-214ENST00000463486 CXXC1Q9P0U4 656 aaPredicted RBP19.91■□□□□ 0.78
VPS52-214ENST00000463486 PCDHA12Q9UN75 941 aa19.91■□□□□ 0.78
VPS52-214ENST00000463486 PCDHB6Q9Y5E3 794 aa19.91■□□□□ 0.78
VPS52-214ENST00000463486 RSPH10B2B2RC85 870 aa19.9■□□□□ 0.78
VPS52-214ENST00000463486 BAG4O95429 457 aaKnown RBP19.9■□□□□ 0.78
VPS52-214ENST00000463486 C22orf31O95567 290 aa19.9■□□□□ 0.78
VPS52-214ENST00000463486 CHRNA1P02708 482 aa19.9■□□□□ 0.78
VPS52-214ENST00000463486 RSPH10BP0C881 870 aa19.9■□□□□ 0.78
VPS52-214ENST00000463486 KLRC1P26715 233 aa19.9■□□□□ 0.78
VPS52-214ENST00000463486 TXKP42681 527 aa19.9■□□□□ 0.78
VPS52-214ENST00000463486 PRKCEQ02156 737 aa19.9■□□□□ 0.78
VPS52-214ENST00000463486 MGAT3Q09327 533 aa19.9■□□□□ 0.78
VPS52-214ENST00000463486 GNL2Q13823 731 aaKnown RBP19.9■□□□□ 0.78
VPS52-214ENST00000463486 PSRC1Q6PGN9 363 aaPredicted RBP19.9■□□□□ 0.78
VPS52-214ENST00000463486 DEFB128Q7Z7B8 93 aa19.9■□□□□ 0.78
VPS52-214ENST00000463486 RPUSD2Q8IZ73 545 aaKnown RBP19.9■□□□□ 0.78
VPS52-214ENST00000463486 LINC01465Q8N7H1 131 aa19.9■□□□□ 0.78
VPS52-214ENST00000463486 HSD17B14Q9BPX1 270 aa19.9■□□□□ 0.78
VPS52-214ENST00000463486 NIFKQ9BYG3 293 aaKnown RBP19.9■□□□□ 0.78
VPS52-214ENST00000463486 SMIM35A0A1B0GVV1 85 aa19.89■□□□□ 0.77
VPS52-214ENST00000463486 H3BQV1 296 aa19.89■□□□□ 0.77
VPS52-214ENST00000463486 SLITRK3O94933 977 aa19.89■□□□□ 0.77
VPS52-214ENST00000463486 FGBP02675 491 aa19.89■□□□□ 0.77
VPS52-214ENST00000463486 PFKMP08237 780 aa19.89■□□□□ 0.77
VPS52-214ENST00000463486 SYT1P21579 422 aa19.89■□□□□ 0.77
VPS52-214ENST00000463486 CHD9Q3L8U1 2897 aa19.89■□□□□ 0.77
VPS52-214ENST00000463486 MCTP1Q6DN14 999 aa19.89■□□□□ 0.77
VPS52-214ENST00000463486 ANO5Q75V66 913 aa19.89■□□□□ 0.77
VPS52-214ENST00000463486 CKAP2LQ8IYA6 745 aa19.89■□□□□ 0.77
VPS52-214ENST00000463486 KIAA0319LQ8IZA0 1049 aa19.89■□□□□ 0.77
VPS52-214ENST00000463486 BANK1Q8NDB2 785 aa19.89■□□□□ 0.77
VPS52-214ENST00000463486 DNAJB3Q8WWF6 145 aa19.89■□□□□ 0.77
VPS52-214ENST00000463486 FAM167AQ96KS9 214 aa19.89■□□□□ 0.77
VPS52-214ENST00000463486 EIF4ENIF1Q9NRA8 985 aaKnown RBP19.89■□□□□ 0.77
VPS52-214ENST00000463486 RGL1Q9NZL6 768 aa19.89■□□□□ 0.77
VPS52-214ENST00000463486 TMEM150BA6NC51 233 aa19.88■□□□□ 0.77
VPS52-214ENST00000463486 MARCH6O60337 910 aa19.88■□□□□ 0.77
VPS52-214ENST00000463486 PARNO95453 639 aaKnown RBP19.88■□□□□ 0.77
VPS52-214ENST00000463486 P4HBP07237 508 aaKnown RBP19.88■□□□□ 0.77
VPS52-214ENST00000463486 QARSP47897 775 aaKnown RBP19.88■□□□□ 0.77
VPS52-214ENST00000463486 PSMC5P62195 406 aa19.88■□□□□ 0.77
VPS52-214ENST00000463486 MKRN4PQ13434 485 aaPredicted RBP19.88■□□□□ 0.77
VPS52-214ENST00000463486 XKR3Q5GH77 459 aa19.88■□□□□ 0.77
VPS52-214ENST00000463486 NCAPH2Q6IBW4 605 aa19.88■□□□□ 0.77
VPS52-214ENST00000463486 TRMT1LQ7Z2T5 733 aaKnown RBP19.88■□□□□ 0.77
VPS52-214ENST00000463486 NRBP2Q9NSY0 501 aa19.88■□□□□ 0.77
VPS52-214ENST00000463486 FOXD4L1Q9NU39 408 aa19.88■□□□□ 0.77
VPS52-214ENST00000463486 NOL7Q9UMY1 257 aaKnown RBP19.88■□□□□ 0.77
VPS52-214ENST00000463486 CTSHP09668 335 aa19.87■□□□□ 0.77
VPS52-214ENST00000463486 OR52Z1P0C646 297 aa19.87■□□□□ 0.77
VPS52-214ENST00000463486 IL17AQ16552 155 aa19.87■□□□□ 0.77
VPS52-214ENST00000463486 FAM109BQ6ICB4 259 aaPredicted RBP19.87■□□□□ 0.77
VPS52-214ENST00000463486 OTOP2Q7RTS6 562 aa19.87■□□□□ 0.77
VPS52-214ENST00000463486 LRCH3Q96II8 777 aa19.87■□□□□ 0.77
VPS52-214ENST00000463486 DYDC2Q96IM9 177 aa19.87■□□□□ 0.77
VPS52-214ENST00000463486 RNPC3Q96LT9 517 aaKnown RBP19.87■□□□□ 0.77
VPS52-214ENST00000463486 SPATA31C1P0DKV0 1188 aa19.86■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms