RNA–Protein interactions for RNA: ENST00000462306.5

ERCC3-206, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best)

Gene ERCC3, Length 963 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-206ENST00000462306 PPP2R5CQ13362 524 aa17.87■□□□□ 0.45
ERCC3-206ENST00000462306 UGCGQ16739 394 aa17.87■□□□□ 0.45
ERCC3-206ENST00000462306 RPAINQ86UA6 219 aa17.87■□□□□ 0.45
ERCC3-206ENST00000462306 HERVK_113Q902F9 699 aa17.87■□□□□ 0.45
ERCC3-206ENST00000462306 SMC3Q9UQE7 1217 aa17.87■□□□□ 0.45
ERCC3-206ENST00000462306 KAT6AQ92794 2004 aa17.87■□□□□ 0.45
ERCC3-206ENST00000462306 RSPH10B2B2RC85 870 aa17.86■□□□□ 0.45
ERCC3-206ENST00000462306 RBAK-RBAKDNI3L0D1 243 aa17.86■□□□□ 0.45
ERCC3-206ENST00000462306 EML1O00423 815 aa17.86■□□□□ 0.45
ERCC3-206ENST00000462306 PARNO95453 639 aaKnown RBP17.86■□□□□ 0.45
ERCC3-206ENST00000462306 CXCL10P02778 98 aa17.86■□□□□ 0.45
ERCC3-206ENST00000462306 RSPH10BP0C881 870 aa17.86■□□□□ 0.45
ERCC3-206ENST00000462306 SPIRE1Q08AE8 756 aa17.86■□□□□ 0.45
ERCC3-206ENST00000462306 TAF2Q6P1X5 1199 aa17.86■□□□□ 0.45
ERCC3-206ENST00000462306 CKAP2LQ8IYA6 745 aa17.86■□□□□ 0.45
ERCC3-206ENST00000462306 SLFN12Q8IYM2 578 aa17.86■□□□□ 0.45
ERCC3-206ENST00000462306 BBXQ8WY36 941 aaPredicted RBP17.86■□□□□ 0.45
ERCC3-206ENST00000462306 LRCH3Q96II8 777 aa17.86■□□□□ 0.45
ERCC3-206ENST00000462306 MTMR9Q96QG7 549 aa17.86■□□□□ 0.45
ERCC3-206ENST00000462306 CXXC1Q9P0U4 656 aaPredicted RBP17.86■□□□□ 0.45
ERCC3-206ENST00000462306 NEMFO60524 1076 aa17.85■□□□□ 0.45
ERCC3-206ENST00000462306 BAG4O95429 457 aaKnown RBP17.85■□□□□ 0.45
ERCC3-206ENST00000462306 COL1A2P08123 1366 aa17.85■□□□□ 0.45
ERCC3-206ENST00000462306 ATP2B1P20020 1258 aa17.85■□□□□ 0.45
ERCC3-206ENST00000462306 GNL2Q13823 731 aaKnown RBP17.85■□□□□ 0.45
ERCC3-206ENST00000462306 CALCRLQ16602 461 aa17.85■□□□□ 0.45
ERCC3-206ENST00000462306 WDR81Q562E7 1941 aa17.85■□□□□ 0.45
ERCC3-206ENST00000462306 ZNF484Q5JVG2 852 aa17.85■□□□□ 0.45
ERCC3-206ENST00000462306 FAM26DQ5JW98 314 aa17.85■□□□□ 0.45
ERCC3-206ENST00000462306 MTHFD1LQ6UB35 978 aa17.85■□□□□ 0.45
ERCC3-206ENST00000462306 OTOP2Q7RTS6 562 aa17.85■□□□□ 0.45
ERCC3-206ENST00000462306 PCDHA2Q9Y5H9 948 aa17.85■□□□□ 0.45
ERCC3-206ENST00000462306 TET1Q8NFU7 2136 aa17.84■□□□□ 0.45
ERCC3-206ENST00000462306 MYH9P35579 1960 aaKnown RBP17.84■□□□□ 0.45
ERCC3-206ENST00000462306 MARCH6O60337 910 aa17.84■□□□□ 0.45
ERCC3-206ENST00000462306 STBD1O95210 358 aa17.84■□□□□ 0.45
ERCC3-206ENST00000462306 CTSHP09668 335 aa17.84■□□□□ 0.45
ERCC3-206ENST00000462306 KLRC1P26715 233 aa17.84■□□□□ 0.45
ERCC3-206ENST00000462306 MCM7P33993 719 aa17.84■□□□□ 0.45
ERCC3-206ENST00000462306 TRAPPC10P48553 1259 aa17.84■□□□□ 0.45
ERCC3-206ENST00000462306 PRKCEQ02156 737 aa17.84■□□□□ 0.45
ERCC3-206ENST00000462306 TRMT1LQ7Z2T5 733 aaKnown RBP17.84■□□□□ 0.45
ERCC3-206ENST00000462306 DNAJB3Q8WWF6 145 aa17.84■□□□□ 0.45
ERCC3-206ENST00000462306 SNX21Q969T3 373 aa17.84■□□□□ 0.45
ERCC3-206ENST00000462306 FAM167AQ96KS9 214 aa17.84■□□□□ 0.45
ERCC3-206ENST00000462306 OSBPL7Q9BZF2 842 aa17.84■□□□□ 0.45
ERCC3-206ENST00000462306 FTOQ9C0B1 505 aaKnown RBP eCLIP17.84■□□□□ 0.45
ERCC3-206ENST00000462306 TMEM60Q9H2L4 133 aa17.84■□□□□ 0.45
ERCC3-206ENST00000462306 SMIM35A0A1B0GVV1 85 aa17.83■□□□□ 0.44
ERCC3-206ENST00000462306 K7ELQ4 463 aaPredicted RBP17.83■□□□□ 0.44
ERCC3-206ENST00000462306 CHRNA1P02708 482 aa17.83■□□□□ 0.44
ERCC3-206ENST00000462306 OATP04181 439 aa17.83■□□□□ 0.44
ERCC3-206ENST00000462306 TOB1P50616 345 aaPredicted RBP17.83■□□□□ 0.44
ERCC3-206ENST00000462306 ORC2Q13416 577 aaPredicted RBP17.83■□□□□ 0.44
ERCC3-206ENST00000462306 ZNF174Q15697 407 aa17.83■□□□□ 0.44
ERCC3-206ENST00000462306 TCTN1Q2MV58 587 aa17.83■□□□□ 0.44
ERCC3-206ENST00000462306 TTC38Q5R3I4 469 aa17.83■□□□□ 0.44
ERCC3-206ENST00000462306 LARP1BQ659C4 914 aaKnown RBP17.83■□□□□ 0.44
ERCC3-206ENST00000462306 FAM109BQ6ICB4 259 aaPredicted RBP17.83■□□□□ 0.44
ERCC3-206ENST00000462306 BANK1Q8NDB2 785 aa17.83■□□□□ 0.44
ERCC3-206ENST00000462306 NRBP2Q9NSY0 501 aa17.83■□□□□ 0.44
ERCC3-206ENST00000462306 PCDHA12Q9UN75 941 aa17.83■□□□□ 0.44
ERCC3-206ENST00000462306 H3BQV1 296 aa17.82■□□□□ 0.44
ERCC3-206ENST00000462306 C22orf31O95567 290 aa17.82■□□□□ 0.44
ERCC3-206ENST00000462306 ACTN1P12814 892 aa17.82■□□□□ 0.44
ERCC3-206ENST00000462306 TXKP42681 527 aa17.82■□□□□ 0.44
ERCC3-206ENST00000462306 PSMC5P62195 406 aa17.82■□□□□ 0.44
ERCC3-206ENST00000462306 SMAD3P84022 425 aaKnown RBP17.82■□□□□ 0.44
ERCC3-206ENST00000462306 MGAT3Q09327 533 aa17.82■□□□□ 0.44
ERCC3-206ENST00000462306 NBR1Q14596 966 aa17.82■□□□□ 0.44
ERCC3-206ENST00000462306 EPHA7Q15375 998 aa17.82■□□□□ 0.44
ERCC3-206ENST00000462306 RSPH3Q86UC2 560 aa17.82■□□□□ 0.44
ERCC3-206ENST00000462306 INTS4Q96HW7 963 aaKnown RBP17.82■□□□□ 0.44
ERCC3-206ENST00000462306 FAM49AQ9H0Q0 323 aaPredicted RBP17.82■□□□□ 0.44
ERCC3-206ENST00000462306 MTIF3Q9H2K0 278 aaKnown RBP17.82■□□□□ 0.44
ERCC3-206ENST00000462306 TTC12Q9H892 705 aaPredicted RBP17.82■□□□□ 0.44
ERCC3-206ENST00000462306 NOL7Q9UMY1 257 aaKnown RBP17.82■□□□□ 0.44
ERCC3-206ENST00000462306 HSFX4A0A1B0GTS1 333 aaPredicted RBP17.81■□□□□ 0.44
ERCC3-206ENST00000462306 HSFX3A0A1B0GWH4 333 aaPredicted RBP17.81■□□□□ 0.44
ERCC3-206ENST00000462306 RPLP2P05387 115 aaKnown RBP17.81■□□□□ 0.44
ERCC3-206ENST00000462306 P4HBP07237 508 aaKnown RBP17.81■□□□□ 0.44
ERCC3-206ENST00000462306 TARBP2Q15633 366 aaKnown RBP17.81■□□□□ 0.44
ERCC3-206ENST00000462306 XKR3Q5GH77 459 aa17.81■□□□□ 0.44
ERCC3-206ENST00000462306 MCTP1Q6DN14 999 aa17.81■□□□□ 0.44
ERCC3-206ENST00000462306 NCAPH2Q6IBW4 605 aa17.81■□□□□ 0.44
ERCC3-206ENST00000462306 CNKSR3Q6P9H4 555 aa17.81■□□□□ 0.44
ERCC3-206ENST00000462306 KIAA0319LQ8IZA0 1049 aa17.81■□□□□ 0.44
ERCC3-206ENST00000462306 C4orf32Q8N8J7 132 aa17.81■□□□□ 0.44
ERCC3-206ENST00000462306 NIFKQ9BYG3 293 aaKnown RBP17.81■□□□□ 0.44
ERCC3-206ENST00000462306 WRAP73Q9P2S5 460 aaPredicted RBP17.81■□□□□ 0.44
ERCC3-206ENST00000462306 CEP131Q9UPN4 1083 aa17.81■□□□□ 0.44
ERCC3-206ENST00000462306 TMEM150BA6NC51 233 aa17.8■□□□□ 0.44
ERCC3-206ENST00000462306 ZBBXA8MT70 800 aa17.8■□□□□ 0.44
ERCC3-206ENST00000462306 GRXCR1A8MXD5 290 aa17.8■□□□□ 0.44
ERCC3-206ENST00000462306 BAIAP3O94812 1187 aa17.8■□□□□ 0.44
ERCC3-206ENST00000462306 QARSP47897 775 aaKnown RBP17.8■□□□□ 0.44
ERCC3-206ENST00000462306 MRPS6P82932 125 aaKnown RBP17.8■□□□□ 0.44
ERCC3-206ENST00000462306 PLEKHG4Q58EX7 1191 aa17.8■□□□□ 0.44
ERCC3-206ENST00000462306 GPR153Q6NV75 609 aa17.8■□□□□ 0.44
ERCC3-206ENST00000462306 NME8Q8N427 588 aa17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms