RNA–Protein interactions for RNA: ENST00000462289.1

VPS36-202, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 2

Gene VPS36, Length 544 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-202ENST00000462289 ATP2A1O14983 1001 aa6.76□□□□□ -1.33
VPS36-202ENST00000462289 WDR46O15213 610 aaKnown RBP6.76□□□□□ -1.33
VPS36-202ENST00000462289 PRDM1O75626 825 aa6.76□□□□□ -1.33
VPS36-202ENST00000462289 TIAF1O95411 115 aa6.76□□□□□ -1.33
VPS36-202ENST00000462289 TTLL1O95922 423 aa6.76□□□□□ -1.33
VPS36-202ENST00000462289 APPP05067 770 aa6.76□□□□□ -1.33
VPS36-202ENST00000462289 EEF2P13639 858 aaKnown RBP6.76□□□□□ -1.33
VPS36-202ENST00000462289 HMGCS2P54868 508 aa6.76□□□□□ -1.33
VPS36-202ENST00000462289 TFAP4Q01664 338 aa6.76□□□□□ -1.33
VPS36-202ENST00000462289 IMMTQ16891 758 aaKnown RBP6.76□□□□□ -1.33
VPS36-202ENST00000462289 BTNL9Q6UXG8 535 aa6.76□□□□□ -1.33
VPS36-202ENST00000462289 CATSPERGQ6ZRH7 1159 aa6.76□□□□□ -1.33
VPS36-202ENST00000462289 DGKHQ86XP1 1220 aa6.76□□□□□ -1.33
VPS36-202ENST00000462289 SMG8Q8ND04 991 aaKnown RBP6.76□□□□□ -1.33
VPS36-202ENST00000462289 REPS2Q8NFH8 660 aa6.76□□□□□ -1.33
VPS36-202ENST00000462289 USP26Q9BXU7 913 aa6.76□□□□□ -1.33
VPS36-202ENST00000462289 CNNM2Q9H8M5 875 aa6.76□□□□□ -1.33
VPS36-202ENST00000462289 CABP5Q9NP86 173 aa6.76□□□□□ -1.33
VPS36-202ENST00000462289 ZSWIM5Q9P217 1185 aa6.76□□□□□ -1.33
VPS36-202ENST00000462289 NID2Q14112 1375 aa6.76□□□□□ -1.33
VPS36-202ENST00000462289 LOC100289279A0A1B0GTE1 492 aa6.75□□□□□ -1.33
VPS36-202ENST00000462289 E7EWF7 191 aa6.75□□□□□ -1.33
VPS36-202ENST00000462289 PDHXO00330 501 aa6.75□□□□□ -1.33
VPS36-202ENST00000462289 CNMDO75829 334 aa6.75□□□□□ -1.33
VPS36-202ENST00000462289 REC8O95072 547 aa6.75□□□□□ -1.33
VPS36-202ENST00000462289 NDUFB10O96000 172 aa6.75□□□□□ -1.33
VPS36-202ENST00000462289 CTCFP49711 727 aaPredicted RBP6.75□□□□□ -1.33
VPS36-202ENST00000462289 GP2P55259 537 aaKnown RBP6.75□□□□□ -1.33
VPS36-202ENST00000462289 EVCP57679 992 aa6.75□□□□□ -1.33
VPS36-202ENST00000462289 HAND2P61296 217 aa6.75□□□□□ -1.33
VPS36-202ENST00000462289 EXOSC10Q01780 885 aaKnown RBP6.75□□□□□ -1.33
VPS36-202ENST00000462289 FAM110CQ1W6H9 321 aa6.75□□□□□ -1.33
VPS36-202ENST00000462289 CREB3L3Q68CJ9 461 aa6.75□□□□□ -1.33
VPS36-202ENST00000462289 OTUD7BQ6GQQ9 843 aa6.75□□□□□ -1.33
VPS36-202ENST00000462289 MFSD6Q6ZSS7 791 aa6.75□□□□□ -1.33
VPS36-202ENST00000462289 ENAHQ8N8S7 591 aaPredicted RBP6.75□□□□□ -1.33
VPS36-202ENST00000462289 SHKBP1Q8TBC3 707 aa6.75□□□□□ -1.33
VPS36-202ENST00000462289 IGDCC4Q8TDY8 1250 aa6.75□□□□□ -1.33
VPS36-202ENST00000462289 ESR2Q92731 530 aa6.75□□□□□ -1.33
VPS36-202ENST00000462289 PARK7Q99497 189 aaKnown RBP6.75□□□□□ -1.33
VPS36-202ENST00000462289 KRT23Q9C075 422 aa6.75□□□□□ -1.33
VPS36-202ENST00000462289 ASCC2Q9H1I8 757 aaPredicted RBP6.75□□□□□ -1.33
VPS36-202ENST00000462289 KCNF1Q9H3M0 494 aa6.75□□□□□ -1.33
VPS36-202ENST00000462289 SH2D4AQ9H788 454 aa6.75□□□□□ -1.33
VPS36-202ENST00000462289 MKNK2Q9HBH9 465 aa6.75□□□□□ -1.33
VPS36-202ENST00000462289 OAS3Q9Y6K5 1087 aaKnown RBP6.75□□□□□ -1.33
VPS36-202ENST00000462289 LRRC37A2A6NM11 1700 aa6.74□□□□□ -1.33
VPS36-202ENST00000462289 B4E1Z4 1266 aa6.74□□□□□ -1.33
VPS36-202ENST00000462289 F5H6K3 240 aa6.74□□□□□ -1.33
VPS36-202ENST00000462289 NMT2O60551 498 aa6.74□□□□□ -1.33
VPS36-202ENST00000462289 TSPY3P0CV98 308 aa6.74□□□□□ -1.33
VPS36-202ENST00000462289 TSPY8P0CW00 308 aa6.74□□□□□ -1.33
VPS36-202ENST00000462289 PDHBP11177 359 aa6.74□□□□□ -1.33
VPS36-202ENST00000462289 TOP1P11387 765 aaKnown RBP6.74□□□□□ -1.33
VPS36-202ENST00000462289 ESRRAP11474 423 aaPredicted RBP6.74□□□□□ -1.33
VPS36-202ENST00000462289 CTGFP29279 349 aa6.74□□□□□ -1.33
VPS36-202ENST00000462289 LIFRP42702 1097 aa6.74□□□□□ -1.33
VPS36-202ENST00000462289 GCLCP48506 637 aaPredicted RBP6.74□□□□□ -1.33
VPS36-202ENST00000462289 RCAN1P53805 252 aa6.74□□□□□ -1.33
VPS36-202ENST00000462289 HERVK_113P62684 666 aa6.74□□□□□ -1.33
VPS36-202ENST00000462289 KLRC3Q07444 240 aa6.74□□□□□ -1.33
VPS36-202ENST00000462289 TROAPQ12815 778 aa6.74□□□□□ -1.33
VPS36-202ENST00000462289 RAB3GAP1Q15042 981 aa6.74□□□□□ -1.33
VPS36-202ENST00000462289 TAF1CQ15572 869 aaPredicted RBP6.74□□□□□ -1.33
VPS36-202ENST00000462289 CCDC178Q5BJE1 867 aa6.74□□□□□ -1.33
VPS36-202ENST00000462289 FAM47AQ5JRC9 791 aa6.74□□□□□ -1.33
VPS36-202ENST00000462289 CYB5R4Q7L1T6 521 aa6.74□□□□□ -1.33
VPS36-202ENST00000462289 SGMS1Q86VZ5 419 aa6.74□□□□□ -1.33
VPS36-202ENST00000462289 KRTAP19-1Q8IUB9 90 aa6.74□□□□□ -1.33
VPS36-202ENST00000462289 ZNF444Q8N0Y2 327 aaPredicted RBP6.74□□□□□ -1.33
VPS36-202ENST00000462289 ZNF296Q8WUU4 475 aaPredicted RBP6.74□□□□□ -1.33
VPS36-202ENST00000462289 MTMR8Q96EF0 704 aa6.74□□□□□ -1.33
VPS36-202ENST00000462289 MAP3K14Q99558 947 aa6.74□□□□□ -1.33
VPS36-202ENST00000462289 TMEM47Q9BQJ4 181 aa6.74□□□□□ -1.33
VPS36-202ENST00000462289 TM6SF1Q9BZW5 370 aa6.74□□□□□ -1.33
VPS36-202ENST00000462289 NRSN2Q9GZP1 204 aa6.74□□□□□ -1.33
VPS36-202ENST00000462289 ZFYVE28Q9HCC9 887 aa6.74□□□□□ -1.33
VPS36-202ENST00000462289 TXNRD2Q9NNW7 524 aa6.74□□□□□ -1.33
VPS36-202ENST00000462289 RBPJLQ9UBG7 517 aa6.74□□□□□ -1.33
VPS36-202ENST00000462289 ZNF214Q9UL59 606 aaPredicted RBP6.74□□□□□ -1.33
VPS36-202ENST00000462289 FRMPD3Q5JV73 1810 aa6.73□□□□□ -1.33
VPS36-202ENST00000462289 MCM3APO60318 1980 aa6.73□□□□□ -1.33
VPS36-202ENST00000462289 TSPY2A6NKD2 308 aa6.73□□□□□ -1.33
VPS36-202ENST00000462289 EIF4EBP3O60516 100 aaPredicted RBP6.73□□□□□ -1.33
VPS36-202ENST00000462289 ADAMTS4O75173 837 aa6.73□□□□□ -1.33
VPS36-202ENST00000462289 TBC1D8O95759 1140 aa6.73□□□□□ -1.33
VPS36-202ENST00000462289 DLGAP3O95886 979 aa6.73□□□□□ -1.33
VPS36-202ENST00000462289 CYP2C8P10632 490 aa6.73□□□□□ -1.33
VPS36-202ENST00000462289 MAP4P27816 1152 aaKnown RBP6.73□□□□□ -1.33
VPS36-202ENST00000462289 ANAPC15P60006 121 aa6.73□□□□□ -1.33
VPS36-202ENST00000462289 LACTBP83111 547 aaPredicted RBP6.73□□□□□ -1.33
VPS36-202ENST00000462289 PABPC4Q13310 644 aaKnown RBP eCLIP6.73□□□□□ -1.33
VPS36-202ENST00000462289 COG2Q14746 738 aa6.73□□□□□ -1.33
VPS36-202ENST00000462289 SLC35G1Q2M3R5 365 aa6.73□□□□□ -1.33
VPS36-202ENST00000462289 ADCK5Q3MIX3 580 aa6.73□□□□□ -1.33
VPS36-202ENST00000462289 CASC1Q6TDU7 716 aa6.73□□□□□ -1.33
VPS36-202ENST00000462289 MB21D1Q8N884 522 aa6.73□□□□□ -1.33
VPS36-202ENST00000462289 NCOA7Q8NI08 942 aa6.73□□□□□ -1.33
VPS36-202ENST00000462289 USP6NLQ92738 828 aa6.73□□□□□ -1.33
VPS36-202ENST00000462289 P2RX7Q99572 595 aaKnown RBP6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms