RNA–Protein interactions for RNA: ENST00000462236.1

COPS3-204, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 551 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-204ENST00000462236 LGR4Q9BXB1 951 aa6.5□□□□□ -1.37
COPS3-204ENST00000462236 AP5S1Q9NUS5 200 aa6.5□□□□□ -1.37
COPS3-204ENST00000462236 FANCLQ9NW38 375 aa6.5□□□□□ -1.37
COPS3-204ENST00000462236 ERVK13-1Q9NX77 482 aa6.5□□□□□ -1.37
COPS3-204ENST00000462236 NPFFR2Q9Y5X5 522 aa6.5□□□□□ -1.37
COPS3-204ENST00000462236 SOS1Q07889 1333 aaPredicted RBP6.5□□□□□ -1.37
COPS3-204ENST00000462236 ST20-MTHFSA0A0A6YYL1 179 aa6.49□□□□□ -1.37
COPS3-204ENST00000462236 A0A1W2PQ45 241 aaPredicted RBP6.49□□□□□ -1.37
COPS3-204ENST00000462236 A0A1W2PQY0 241 aa6.49□□□□□ -1.37
COPS3-204ENST00000462236 RASSF10A6NK89 507 aa6.49□□□□□ -1.37
COPS3-204ENST00000462236 PLD2O14939 933 aa6.49□□□□□ -1.37
COPS3-204ENST00000462236 MEFVO15553 781 aaPredicted RBP6.49□□□□□ -1.37
COPS3-204ENST00000462236 HYAL3O43820 417 aaPredicted RBP6.49□□□□□ -1.37
COPS3-204ENST00000462236 EFCAB14O75071 495 aa6.49□□□□□ -1.37
COPS3-204ENST00000462236 FKTNO75072 461 aa6.49□□□□□ -1.37
COPS3-204ENST00000462236 THBDP07204 575 aa6.49□□□□□ -1.37
COPS3-204ENST00000462236 ZGLP1P0C6A0 271 aa6.49□□□□□ -1.37
COPS3-204ENST00000462236 NAT1P18440 290 aa6.49□□□□□ -1.37
COPS3-204ENST00000462236 GABREP78334 506 aa6.49□□□□□ -1.37
COPS3-204ENST00000462236 CYP4F3Q08477 520 aa6.49□□□□□ -1.37
COPS3-204ENST00000462236 NR0B2Q15466 257 aa6.49□□□□□ -1.37
COPS3-204ENST00000462236 FNDC3BQ53EP0 1204 aaKnown RBP6.49□□□□□ -1.37
COPS3-204ENST00000462236 TRIM61Q5EBN2 209 aa6.49□□□□□ -1.37
COPS3-204ENST00000462236 FAM209AQ5JX71 171 aa6.49□□□□□ -1.37
COPS3-204ENST00000462236 ARTNQ5T4W7 220 aa6.49□□□□□ -1.37
COPS3-204ENST00000462236 YOD1Q5VVQ6 348 aaPredicted RBP6.49□□□□□ -1.37
COPS3-204ENST00000462236 FOXB2Q5VYV0 432 aa6.49□□□□□ -1.37
COPS3-204ENST00000462236 EGFLAMQ63HQ2 1017 aa6.49□□□□□ -1.37
COPS3-204ENST00000462236 ZNF574Q6ZN55 896 aaPredicted RBP6.49□□□□□ -1.37
COPS3-204ENST00000462236 KIAA0907Q7Z7F0 614 aaPredicted RBP6.49□□□□□ -1.37
COPS3-204ENST00000462236 TTLL6Q8N841 843 aa6.49□□□□□ -1.37
COPS3-204ENST00000462236 NAT16Q8N8M0 369 aa6.49□□□□□ -1.37
COPS3-204ENST00000462236 PDZD8Q8NEN9 1154 aa6.49□□□□□ -1.37
COPS3-204ENST00000462236 FRS2Q8WU20 508 aa6.49□□□□□ -1.37
COPS3-204ENST00000462236 FEZ1Q99689 392 aa6.49□□□□□ -1.37
COPS3-204ENST00000462236 G6PC3Q9BUM1 346 aa6.49□□□□□ -1.37
COPS3-204ENST00000462236 KANSL2Q9H9L4 492 aa6.49□□□□□ -1.37
COPS3-204ENST00000462236 CUL9Q8IWT3 2517 aa6.48□□□□□ -1.37
COPS3-204ENST00000462236 NPHP3-ACAD11A0A0J9YXS1 232 aa6.48□□□□□ -1.37
COPS3-204ENST00000462236 FITM1A5D6W6 292 aa6.48□□□□□ -1.37
COPS3-204ENST00000462236 LTBRP36941 435 aa6.48□□□□□ -1.37
COPS3-204ENST00000462236 GDNFP39905 211 aa6.48□□□□□ -1.37
COPS3-204ENST00000462236 CD96P40200 585 aa6.48□□□□□ -1.37
COPS3-204ENST00000462236 ECI1P42126 302 aa6.48□□□□□ -1.37
COPS3-204ENST00000462236 CORO7P57737 925 aa6.48□□□□□ -1.37
COPS3-204ENST00000462236 NFIXQ14938 502 aa6.48□□□□□ -1.37
COPS3-204ENST00000462236 SF1Q15637 639 aaKnown RBP6.48□□□□□ -1.37
COPS3-204ENST00000462236 STYK1Q6J9G0 422 aa6.48□□□□□ -1.37
COPS3-204ENST00000462236 TP53INP2Q8IXH6 220 aa6.48□□□□□ -1.37
COPS3-204ENST00000462236 OXR1Q8N573 874 aa6.48□□□□□ -1.37
COPS3-204ENST00000462236 PTPRN2Q92932 1015 aa6.48□□□□□ -1.37
COPS3-204ENST00000462236 NCOA5Q9HCD5 579 aaKnown RBP6.48□□□□□ -1.37
COPS3-204ENST00000462236 GPR27Q9NS67 375 aa6.48□□□□□ -1.37
COPS3-204ENST00000462236 SLAMF8Q9P0V8 285 aa6.48□□□□□ -1.37
COPS3-204ENST00000462236 PLAAQ9Y263 795 aa6.48□□□□□ -1.37
COPS3-204ENST00000462236 FADS2P1A8MWK0 482 aa6.47□□□□□ -1.37
COPS3-204ENST00000462236 HSP90AB1P08238 724 aaKnown RBP6.47□□□□□ -1.37
COPS3-204ENST00000462236 PLS3P13797 630 aa6.47□□□□□ -1.37
COPS3-204ENST00000462236 L1CAMP32004 1257 aa6.47□□□□□ -1.37
COPS3-204ENST00000462236 EIF4A2Q14240 407 aaKnown RBP6.47□□□□□ -1.37
COPS3-204ENST00000462236 PLCL1Q15111 1095 aa6.47□□□□□ -1.37
COPS3-204ENST00000462236 LDHDQ86WU2 507 aa6.47□□□□□ -1.37
COPS3-204ENST00000462236 PPIL6Q8IXY8 311 aa6.47□□□□□ -1.37
COPS3-204ENST00000462236 TMEM52Q8NDY8 209 aa6.47□□□□□ -1.37
COPS3-204ENST00000462236 DIO2Q92813 273 aa6.47□□□□□ -1.37
COPS3-204ENST00000462236 SLKQ9H2G2 1235 aaPredicted RBP6.47□□□□□ -1.37
COPS3-204ENST00000462236 ADAMTS10Q9H324 1103 aa6.47□□□□□ -1.37
COPS3-204ENST00000462236 POLKQ9UBT6 870 aa6.47□□□□□ -1.37
COPS3-204ENST00000462236 NARFQ9UHQ1 456 aa6.47□□□□□ -1.37
COPS3-204ENST00000462236 COL15A1P39059 1388 aa6.46□□□□□ -1.37
COPS3-204ENST00000462236 NUP98P52948 1817 aa6.46□□□□□ -1.37
COPS3-204ENST00000462236 WTIPA6NIX2 430 aaPredicted RBP6.46□□□□□ -1.38
COPS3-204ENST00000462236 AQP7O14520 342 aa6.46□□□□□ -1.38
COPS3-204ENST00000462236 DDNO94850 711 aaPredicted RBP6.46□□□□□ -1.38
COPS3-204ENST00000462236 ASMTLO95671 621 aa6.46□□□□□ -1.38
COPS3-204ENST00000462236 APPP05067 770 aa6.46□□□□□ -1.38
COPS3-204ENST00000462236 SERPINB2P05120 415 aa6.46□□□□□ -1.38
COPS3-204ENST00000462236 C6orf222P0C671 652 aaPredicted RBP6.46□□□□□ -1.38
COPS3-204ENST00000462236 CYP19A1P11511 503 aaPredicted RBP6.46□□□□□ -1.38
COPS3-204ENST00000462236 GTF2A2P52657 109 aa6.46□□□□□ -1.38
COPS3-204ENST00000462236 SNX17Q15036 470 aa6.46□□□□□ -1.38
COPS3-204ENST00000462236 SLCO6A1Q86UG4 719 aa6.46□□□□□ -1.38
COPS3-204ENST00000462236 LILRA2Q8N149 483 aa6.46□□□□□ -1.38
COPS3-204ENST00000462236 SNED1Q8TER0 1413 aa6.46□□□□□ -1.38
COPS3-204ENST00000462236 HHIPL1Q96JK4 782 aa6.46□□□□□ -1.38
COPS3-204ENST00000462236 TAF1DQ9H5J8 278 aaPredicted RBP6.46□□□□□ -1.38
COPS3-204ENST00000462236 GPRC5CQ9NQ84 441 aa6.46□□□□□ -1.38
COPS3-204ENST00000462236 CLEC1BQ9P126 229 aa6.46□□□□□ -1.38
COPS3-204ENST00000462236 MKI67P46013 3256 aaKnown RBP6.46□□□□□ -1.38
COPS3-204ENST00000462236 TRIOBPQ9H2D6 2365 aa6.46□□□□□ -1.38
COPS3-204ENST00000462236 HPXP02790 462 aa6.45□□□□□ -1.38
COPS3-204ENST00000462236 MAP2K1Q02750 393 aaPredicted RBP6.45□□□□□ -1.38
COPS3-204ENST00000462236 NTRK3Q16288 839 aa6.45□□□□□ -1.38
COPS3-204ENST00000462236 PRSS53Q2L4Q9 553 aa6.45□□□□□ -1.38
COPS3-204ENST00000462236 RALGPS1Q5JS13 557 aa6.45□□□□□ -1.38
COPS3-204ENST00000462236 DENND5AQ6IQ26 1287 aa6.45□□□□□ -1.38
COPS3-204ENST00000462236 GALNT18Q6P9A2 607 aa6.45□□□□□ -1.38
COPS3-204ENST00000462236 C2CD5Q86YS7 1000 aa6.45□□□□□ -1.38
COPS3-204ENST00000462236 JAMLQ86YT9 394 aa6.45□□□□□ -1.38
COPS3-204ENST00000462236 GSTCDQ8NEC7 633 aa6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms