RNA–Protein interactions for RNA: ENST00000461558.2

CFHR3-204, Transcript of complement factor H related 3, humanhuman

TSL 2

Gene CFHR3, Length 785 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFHR3-204ENST00000461558 RIC8BQ9NVN3 520 aa6.69□□□□□ -1.34
CFHR3-204ENST00000461558 SRPK3Q9UPE1 567 aa6.69□□□□□ -1.34
CFHR3-204ENST00000461558 TRAV20A0A0B4J274 112 aa6.68□□□□□ -1.34
CFHR3-204ENST00000461558 HMGCRP04035 888 aa6.68□□□□□ -1.34
CFHR3-204ENST00000461558 RPS19P39019 145 aaKnown RBP6.68□□□□□ -1.34
CFHR3-204ENST00000461558 ARID5AQ03989 594 aa6.68□□□□□ -1.34
CFHR3-204ENST00000461558 DPH6Q7L8W6 267 aa6.68□□□□□ -1.34
CFHR3-204ENST00000461558 ZNF808Q8N4W9 903 aaPredicted RBP6.68□□□□□ -1.34
CFHR3-204ENST00000461558 KIAA1683Q9H0B3 1180 aa6.68□□□□□ -1.34
CFHR3-204ENST00000461558 MSL2Q9HCI7 577 aa6.68□□□□□ -1.34
CFHR3-204ENST00000461558 NANOS3P60323 173 aaKnown RBP6.67□□□□□ -1.34
CFHR3-204ENST00000461558 IL13RA1P78552 427 aa6.67□□□□□ -1.34
CFHR3-204ENST00000461558 GPR19Q15760 415 aa6.67□□□□□ -1.34
CFHR3-204ENST00000461558 ANKS3Q6ZW76 656 aa6.67□□□□□ -1.34
CFHR3-204ENST00000461558 LARP4Q71RC2 724 aaKnown RBP eCLIP6.67□□□□□ -1.34
CFHR3-204ENST00000461558 ST13P5Q8NFI4 369 aaPredicted RBP6.67□□□□□ -1.34
CFHR3-204ENST00000461558 CFHR4Q92496 578 aa6.67□□□□□ -1.34
CFHR3-204ENST00000461558 PLEKHG4BQ96PX9 1271 aa6.67□□□□□ -1.34
CFHR3-204ENST00000461558 PUF60Q9UHX1 559 aaKnown RBP6.67□□□□□ -1.34
CFHR3-204ENST00000461558 FBXO10Q9UK96 956 aa6.67□□□□□ -1.34
CFHR3-204ENST00000461558 WNT9AO14904 365 aa6.66□□□□□ -1.34
CFHR3-204ENST00000461558 PTGS1P23219 599 aa6.66□□□□□ -1.34
CFHR3-204ENST00000461558 ADCY8P40145 1251 aa6.66□□□□□ -1.34
CFHR3-204ENST00000461558 KCNQ1P51787 676 aa6.66□□□□□ -1.34
CFHR3-204ENST00000461558 FOXL1Q12952 345 aa6.66□□□□□ -1.34
CFHR3-204ENST00000461558 PAK1Q13153 545 aa6.66□□□□□ -1.34
CFHR3-204ENST00000461558 FIGNQ5HY92 759 aa6.66□□□□□ -1.34
CFHR3-204ENST00000461558 ARHGAP36Q6ZRI8 547 aa6.66□□□□□ -1.34
CFHR3-204ENST00000461558 CXXC5Q7LFL8 322 aaKnown RBP6.66□□□□□ -1.34
CFHR3-204ENST00000461558 TINF2Q9BSI4 451 aa6.66□□□□□ -1.34
CFHR3-204ENST00000461558 INCENPQ9NQS7 918 aa6.66□□□□□ -1.34
CFHR3-204ENST00000461558 GALNT8Q9NY28 637 aa6.66□□□□□ -1.34
CFHR3-204ENST00000461558 TRAF6Q9Y4K3 522 aa6.66□□□□□ -1.34
CFHR3-204ENST00000461558 ATP23Q9Y6H3 246 aa6.66□□□□□ -1.34
CFHR3-204ENST00000461558 A0A087X1B8 175 aa6.65□□□□□ -1.34
CFHR3-204ENST00000461558 MAN2B1O00754 1011 aa6.65□□□□□ -1.34
CFHR3-204ENST00000461558 KLF4O43474 513 aa6.65□□□□□ -1.34
CFHR3-204ENST00000461558 AOAHP28039 575 aa6.65□□□□□ -1.34
CFHR3-204ENST00000461558 GJA4P35212 333 aa6.65□□□□□ -1.34
CFHR3-204ENST00000461558 INHBCP55103 352 aa6.65□□□□□ -1.34
CFHR3-204ENST00000461558 EIF4HQ15056 248 aaKnown RBP6.65□□□□□ -1.34
CFHR3-204ENST00000461558 LRRC47Q8N1G4 583 aaKnown RBP6.65□□□□□ -1.34
CFHR3-204ENST00000461558 NEU4Q8WWR8 484 aaPredicted RBP6.65□□□□□ -1.34
CFHR3-204ENST00000461558 U2SURPO15042 1029 aaKnown RBP6.64□□□□□ -1.35
CFHR3-204ENST00000461558 AMY2AP04746 511 aa6.64□□□□□ -1.35
CFHR3-204ENST00000461558 AMY2BP19961 511 aa6.64□□□□□ -1.35
CFHR3-204ENST00000461558 MSX2P35548 267 aaPredicted RBP6.64□□□□□ -1.35
CFHR3-204ENST00000461558 TUBA3CQ13748 450 aa6.64□□□□□ -1.35
CFHR3-204ENST00000461558 STILQ15468 1287 aa6.64□□□□□ -1.35
CFHR3-204ENST00000461558 TUBA3EQ6PEY2 450 aa6.64□□□□□ -1.35
CFHR3-204ENST00000461558 USP30Q70CQ3 517 aa6.64□□□□□ -1.35
CFHR3-204ENST00000461558 PTRH1Q86Y79 214 aaKnown RBP6.64□□□□□ -1.35
CFHR3-204ENST00000461558 DNAJC10Q8IXB1 793 aa6.64□□□□□ -1.35
CFHR3-204ENST00000461558 TLR9Q9NR96 1032 aa6.64□□□□□ -1.35
CFHR3-204ENST00000461558 PLA2G3Q9NZ20 509 aa6.64□□□□□ -1.35
CFHR3-204ENST00000461558 AQP7O14520 342 aa6.63□□□□□ -1.35
CFHR3-204ENST00000461558 PPFIA2O75334 1257 aa6.63□□□□□ -1.35
CFHR3-204ENST00000461558 PDE6AP16499 860 aa6.63□□□□□ -1.35
CFHR3-204ENST00000461558 HIBADHP31937 336 aaKnown RBP6.63□□□□□ -1.35
CFHR3-204ENST00000461558 MC4RP32245 332 aa6.63□□□□□ -1.35
CFHR3-204ENST00000461558 PCOLCEQ15113 449 aa6.63□□□□□ -1.35
CFHR3-204ENST00000461558 FNDC7Q5VTL7 733 aa6.63□□□□□ -1.35
CFHR3-204ENST00000461558 MAMDC2Q7Z304 686 aaPredicted RBP6.63□□□□□ -1.35
CFHR3-204ENST00000461558 MTDHQ86UE4 582 aaKnown RBP6.63□□□□□ -1.35
CFHR3-204ENST00000461558 FBXW5Q969U6 566 aa6.63□□□□□ -1.35
CFHR3-204ENST00000461558 WNK4Q96J92 1243 aa6.63□□□□□ -1.35
CFHR3-204ENST00000461558 CATSPERZQ9NTU4 200 aa6.63□□□□□ -1.35
CFHR3-204ENST00000461558 BTBD7Q9P203 1132 aa6.63□□□□□ -1.35
CFHR3-204ENST00000461558 CDC42EP3Q9UKI2 254 aa6.63□□□□□ -1.35
CFHR3-204ENST00000461558 DCAF1Q9Y4B6 1507 aa6.62□□□□□ -1.35
CFHR3-204ENST00000461558 C4BPAP04003 597 aaKnown RBP6.62□□□□□ -1.35
CFHR3-204ENST00000461558 ADH4P08319 380 aa6.62□□□□□ -1.35
CFHR3-204ENST00000461558 DNAJA1P31689 397 aaKnown RBP6.62□□□□□ -1.35
CFHR3-204ENST00000461558 HERVK_113P62684 666 aa6.62□□□□□ -1.35
CFHR3-204ENST00000461558 TRIM68Q6AZZ1 485 aa6.62□□□□□ -1.35
CFHR3-204ENST00000461558 OTOP2Q7RTS6 562 aa6.62□□□□□ -1.35
CFHR3-204ENST00000461558 OSTM1Q86WC4 334 aa6.62□□□□□ -1.35
CFHR3-204ENST00000461558 GPR135Q8IZ08 494 aa6.62□□□□□ -1.35
CFHR3-204ENST00000461558 PCDH19Q8TAB3 1148 aa6.62□□□□□ -1.35
CFHR3-204ENST00000461558 BTBD2Q9BX70 525 aa6.62□□□□□ -1.35
CFHR3-204ENST00000461558 OR10A2Q9H208 303 aa6.62□□□□□ -1.35
CFHR3-204ENST00000461558 NELFAQ9H3P2 528 aa6.62□□□□□ -1.35
CFHR3-204ENST00000461558 WDR26Q9H7D7 661 aa6.62□□□□□ -1.35
CFHR3-204ENST00000461558 ZNF703Q9H7S9 590 aaPredicted RBP6.62□□□□□ -1.35
CFHR3-204ENST00000461558 MMRN2Q9H8L6 949 aa6.62□□□□□ -1.35
CFHR3-204ENST00000461558 AURKAIP1Q9NWT8 199 aaPredicted RBP6.62□□□□□ -1.35
CFHR3-204ENST00000461558 SHROOM4Q9ULL8 1493 aa6.61□□□□□ -1.35
CFHR3-204ENST00000461558 PRAMEF25A6NGN4 478 aa6.61□□□□□ -1.35
CFHR3-204ENST00000461558 MPIG6BO95866 241 aa6.61□□□□□ -1.35
CFHR3-204ENST00000461558 PYGMP11217 842 aa6.61□□□□□ -1.35
CFHR3-204ENST00000461558 KRT15P19012 456 aa6.61□□□□□ -1.35
CFHR3-204ENST00000461558 MRE11P49959 708 aa6.61□□□□□ -1.35
CFHR3-204ENST00000461558 EP400NLQ6ZTU2 488 aa6.61□□□□□ -1.35
CFHR3-204ENST00000461558 FILIP1Q7Z7B0 1213 aa6.61□□□□□ -1.35
CFHR3-204ENST00000461558 LDLRAD3Q86YD5 345 aa6.61□□□□□ -1.35
CFHR3-204ENST00000461558 ZNF483Q8TF39 744 aaPredicted RBP6.61□□□□□ -1.35
CFHR3-204ENST00000461558 ZNF669Q96BR6 464 aaPredicted RBP6.61□□□□□ -1.35
CFHR3-204ENST00000461558 CBLCQ9ULV8 474 aa6.61□□□□□ -1.35
CFHR3-204ENST00000461558 PCSK5Q92824 1860 aa6.6□□□□□ -1.35
CFHR3-204ENST00000461558 A0A0G2JNJ9 132 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms