RNA–Protein interactions for RNA: ENST00000461525.5

COL1A2-202, Transcript of collagen type I alpha 2 chain, humanhuman

TSL 1 (best)

Gene COL1A2, Length 776 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A2-202ENST00000461525 SPTBN5Q9NRC6 3674 aaKnown RBP20.11■□□□□ 0.81
COL1A2-202ENST00000461525 BMP1P13497 986 aa20.1■□□□□ 0.81
COL1A2-202ENST00000461525 KCNQ1P51787 676 aa20.1■□□□□ 0.81
COL1A2-202ENST00000461525 EVCP57679 992 aa20.1■□□□□ 0.81
COL1A2-202ENST00000461525 EPC2Q52LR7 807 aa20.1■□□□□ 0.81
COL1A2-202ENST00000461525 RUFY3Q7L099 469 aa20.1■□□□□ 0.81
COL1A2-202ENST00000461525 CCDC60Q8IWA6 550 aaPredicted RBP20.1■□□□□ 0.81
COL1A2-202ENST00000461525 RASGRP4Q8TDF6 673 aa20.1■□□□□ 0.81
COL1A2-202ENST00000461525 ATP8B4Q8TF62 1192 aa20.1■□□□□ 0.81
COL1A2-202ENST00000461525 IL17RAQ96F46 866 aa20.1■□□□□ 0.81
COL1A2-202ENST00000461525 NCOA5Q9HCD5 579 aaKnown RBP20.1■□□□□ 0.81
COL1A2-202ENST00000461525 ZSWIM6Q9HCJ5 1215 aa20.1■□□□□ 0.81
COL1A2-202ENST00000461525 ZNF302Q9NR11 478 aa20.1■□□□□ 0.81
COL1A2-202ENST00000461525 TBC1D22BQ9NU19 505 aa20.1■□□□□ 0.81
COL1A2-202ENST00000461525 TRPV2Q9Y5S1 764 aa20.1■□□□□ 0.81
COL1A2-202ENST00000461525 MICAL3Q7RTP6 2002 aa20.09■□□□□ 0.81
COL1A2-202ENST00000461525 SMIM35A0A1B0GVV1 85 aa20.09■□□□□ 0.81
COL1A2-202ENST00000461525 DHX15O43143 795 aaKnown RBP20.09■□□□□ 0.81
COL1A2-202ENST00000461525 HBP1O60381 514 aa20.09■□□□□ 0.81
COL1A2-202ENST00000461525 CD52P31358 61 aa20.09■□□□□ 0.81
COL1A2-202ENST00000461525 TMEM62Q0P6H9 643 aa20.09■□□□□ 0.81
COL1A2-202ENST00000461525 PDXDC2PQ6P474 469 aa20.09■□□□□ 0.81
COL1A2-202ENST00000461525 MTHFD1LQ6UB35 978 aa20.09■□□□□ 0.81
COL1A2-202ENST00000461525 UIMC1Q96RL1 719 aa20.09■□□□□ 0.81
COL1A2-202ENST00000461525 AGO3Q9H9G7 860 aaKnown RBP20.09■□□□□ 0.81
COL1A2-202ENST00000461525 VPS54Q9P1Q0 977 aa20.09■□□□□ 0.81
COL1A2-202ENST00000461525 CYP46A1Q9Y6A2 500 aa20.09■□□□□ 0.81
COL1A2-202ENST00000461525 SQORQ9Y6N5 450 aa20.09■□□□□ 0.81
COL1A2-202ENST00000461525 COL4A4P53420 1690 aaPredicted RBP20.09■□□□□ 0.81
COL1A2-202ENST00000461525 ENPP3O14638 875 aa20.08■□□□□ 0.81
COL1A2-202ENST00000461525 TOB2Q14106 344 aaPredicted RBP20.08■□□□□ 0.81
COL1A2-202ENST00000461525 PTPROQ16827 1216 aa20.08■□□□□ 0.81
COL1A2-202ENST00000461525 PRR16Q569H4 304 aa20.08■□□□□ 0.81
COL1A2-202ENST00000461525 ZNF746Q6NUN9 644 aaPredicted RBP20.08■□□□□ 0.81
COL1A2-202ENST00000461525 SWSAP1Q6NVH7 229 aa20.08■□□□□ 0.81
COL1A2-202ENST00000461525 TMEM192Q8IY95 271 aa20.08■□□□□ 0.81
COL1A2-202ENST00000461525 TRIM22Q8IYM9 498 aa20.08■□□□□ 0.81
COL1A2-202ENST00000461525 FIBCD1Q8N539 461 aa20.08■□□□□ 0.81
COL1A2-202ENST00000461525 COL4A6Q14031 1691 aa20.07■□□□□ 0.8
COL1A2-202ENST00000461525 KLRC1P26715 233 aa20.07■□□□□ 0.8
COL1A2-202ENST00000461525 CIITAP33076 1130 aa20.07■□□□□ 0.8
COL1A2-202ENST00000461525 KRT76Q01546 638 aa20.07■□□□□ 0.8
COL1A2-202ENST00000461525 CKAP2LQ8IYA6 745 aa20.07■□□□□ 0.8
COL1A2-202ENST00000461525 NME8Q8N427 588 aa20.07■□□□□ 0.8
COL1A2-202ENST00000461525 MRPL38Q96DV4 380 aaKnown RBP20.07■□□□□ 0.8
COL1A2-202ENST00000461525 FTHL17Q9BXU8 183 aa20.07■□□□□ 0.8
COL1A2-202ENST00000461525 CELF4Q9BZC1 486 aaKnown RBP20.07■□□□□ 0.8
COL1A2-202ENST00000461525 COL1A2P08123 1366 aa20.07■□□□□ 0.8
COL1A2-202ENST00000461525 ADGRA3Q8IWK6 1321 aa20.06■□□□□ 0.8
COL1A2-202ENST00000461525 IGSF9BQ9UPX0 1349 aa20.06■□□□□ 0.8
COL1A2-202ENST00000461525 H3BNC9 293 aa20.06■□□□□ 0.8
COL1A2-202ENST00000461525 CPLX1O14810 134 aa20.06■□□□□ 0.8
COL1A2-202ENST00000461525 NLRP5P59047 1200 aa20.06■□□□□ 0.8
COL1A2-202ENST00000461525 PAK2Q13177 524 aa20.06■□□□□ 0.8
COL1A2-202ENST00000461525 GPM6BQ13491 265 aa20.06■□□□□ 0.8
COL1A2-202ENST00000461525 ZNF484Q5JVG2 852 aa20.06■□□□□ 0.8
COL1A2-202ENST00000461525 SMAP1Q8IYB5 467 aaPredicted RBP20.06■□□□□ 0.8
COL1A2-202ENST00000461525 NECAB3Q96P71 396 aaPredicted RBP20.06■□□□□ 0.8
COL1A2-202ENST00000461525 UPF3BQ9BZI7 483 aaKnown RBP20.06■□□□□ 0.8
COL1A2-202ENST00000461525 TM6SF1Q9BZW5 370 aa20.06■□□□□ 0.8
COL1A2-202ENST00000461525 SH3GLB2Q9NR46 395 aa20.06■□□□□ 0.8
COL1A2-202ENST00000461525 KDM3AQ9Y4C1 1321 aa20.05■□□□□ 0.8
COL1A2-202ENST00000461525 TRANK1O15050 2925 aa20.05■□□□□ 0.8
COL1A2-202ENST00000461525 PSAPP07602 524 aa20.05■□□□□ 0.8
COL1A2-202ENST00000461525 CTNNB1P35222 781 aa20.05■□□□□ 0.8
COL1A2-202ENST00000461525 SSRP1Q08945 709 aaKnown RBP20.05■□□□□ 0.8
COL1A2-202ENST00000461525 TIGD5Q53EQ6 642 aa20.05■□□□□ 0.8
COL1A2-202ENST00000461525 CPLX2Q6PUV4 134 aaKnown RBP20.05■□□□□ 0.8
COL1A2-202ENST00000461525 LINC01599Q8WXQ3 324 aa20.05■□□□□ 0.8
COL1A2-202ENST00000461525 ZNF274Q96GC6 653 aaPredicted RBP20.05■□□□□ 0.8
COL1A2-202ENST00000461525 PADI3Q9ULW8 664 aa20.05■□□□□ 0.8
COL1A2-202ENST00000461525 GINS2Q9Y248 185 aa20.05■□□□□ 0.8
COL1A2-202ENST00000461525 RWDD3Q9Y3V2 267 aa20.05■□□□□ 0.8
COL1A2-202ENST00000461525 PCDHA10Q9Y5I2 948 aa20.05■□□□□ 0.8
COL1A2-202ENST00000461525 BTG3Q14201 252 aaPredicted RBP20.04■□□□□ 0.8
COL1A2-202ENST00000461525 BBXQ8WY36 941 aaPredicted RBP20.04■□□□□ 0.8
COL1A2-202ENST00000461525 LENG9Q96B70 501 aa20.04■□□□□ 0.8
COL1A2-202ENST00000461525 UBE2ZQ9H832 354 aaPredicted RBP20.04■□□□□ 0.8
COL1A2-202ENST00000461525 RC3H2Q9HBD1 1191 aaKnown RBP20.04■□□□□ 0.8
COL1A2-202ENST00000461525 SAMM50Q9Y512 469 aa20.04■□□□□ 0.8
COL1A2-202ENST00000461525 MAFBQ9Y5Q3 323 aaPredicted RBP20.04■□□□□ 0.8
COL1A2-202ENST00000461525 KAT6AQ92794 2004 aa20.03■□□□□ 0.8
COL1A2-202ENST00000461525 NCOR1O75376 2440 aa20.03■□□□□ 0.8
COL1A2-202ENST00000461525 WDR64B1ANS9 1081 aa20.03■□□□□ 0.8
COL1A2-202ENST00000461525 ZBTB42B2RXF5 422 aa20.03■□□□□ 0.8
COL1A2-202ENST00000461525 DEXIO95424 95 aa20.03■□□□□ 0.8
COL1A2-202ENST00000461525 ATP4AP20648 1035 aa20.03■□□□□ 0.8
COL1A2-202ENST00000461525 TRMT1LQ7Z2T5 733 aaKnown RBP20.03■□□□□ 0.8
COL1A2-202ENST00000461525 NPAS4Q8IUM7 802 aa20.03■□□□□ 0.8
COL1A2-202ENST00000461525 KIAA0319LQ8IZA0 1049 aa20.03■□□□□ 0.8
COL1A2-202ENST00000461525 LARP6Q9BRS8 491 aaKnown RBP20.03■□□□□ 0.8
COL1A2-202ENST00000461525 C11orf84Q9BUA3 381 aaPredicted RBP20.03■□□□□ 0.8
COL1A2-202ENST00000461525 C22orf23Q9BZE7 217 aa20.03■□□□□ 0.8
COL1A2-202ENST00000461525 PDRG1Q9NUG6 133 aa20.03■□□□□ 0.8
COL1A2-202ENST00000461525 GABBR1Q9UBS5 961 aa20.03■□□□□ 0.8
COL1A2-202ENST00000461525 SIP14410 1827 aa20.02■□□□□ 0.8
COL1A2-202ENST00000461525 DGKIO75912 1065 aa20.02■□□□□ 0.8
COL1A2-202ENST00000461525 C22orf31O95567 290 aa20.02■□□□□ 0.8
COL1A2-202ENST00000461525 RB1P06400 928 aa20.02■□□□□ 0.8
COL1A2-202ENST00000461525 STAG3L1P0CL83 205 aa20.02■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms