RNA–Protein interactions for RNA: ENST00000461437.5

NUP50-213, Transcript of nucleoporin 50, humanhuman

TSL 4

Gene NUP50, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-213ENST00000461437 SCRN1Q12765 414 aa17.61■□□□□ 0.41
NUP50-213ENST00000461437 SKIV2LQ15477 1246 aaKnown RBP17.61■□□□□ 0.41
NUP50-213ENST00000461437 FBXO47Q5MNV8 452 aa17.61■□□□□ 0.41
NUP50-213ENST00000461437 POTEBQ6S5H4 581 aa17.61■□□□□ 0.41
NUP50-213ENST00000461437 PLPPR4Q7Z2D5 763 aa17.61■□□□□ 0.41
NUP50-213ENST00000461437 PPP1R16BQ96T49 567 aa17.61■□□□□ 0.41
NUP50-213ENST00000461437 SUGCTQ9HAC7 445 aa17.61■□□□□ 0.41
NUP50-213ENST00000461437 ZNF302Q9NR11 478 aa17.61■□□□□ 0.41
NUP50-213ENST00000461437 GJB4Q9NTQ9 266 aa17.61■□□□□ 0.41
NUP50-213ENST00000461437 THEGQ9P2T0 379 aa17.61■□□□□ 0.41
NUP50-213ENST00000461437 RRN3P2A6NIE6 340 aa17.6■□□□□ 0.41
NUP50-213ENST00000461437 CD52P31358 61 aa17.6■□□□□ 0.41
NUP50-213ENST00000461437 HTRA4P83105 476 aaPredicted RBP17.6■□□□□ 0.41
NUP50-213ENST00000461437 PDXDC2PQ6P474 469 aa17.6■□□□□ 0.41
NUP50-213ENST00000461437 MTHFD1LQ6UB35 978 aa17.6■□□□□ 0.41
NUP50-213ENST00000461437 RPAINQ86UA6 219 aa17.6■□□□□ 0.41
NUP50-213ENST00000461437 RSPH3Q86UC2 560 aa17.6■□□□□ 0.41
NUP50-213ENST00000461437 TEX2Q8IWB9 1127 aa17.6■□□□□ 0.41
NUP50-213ENST00000461437 TRIM22Q8IYM9 498 aa17.6■□□□□ 0.41
NUP50-213ENST00000461437 LINC01599Q8WXQ3 324 aa17.6■□□□□ 0.41
NUP50-213ENST00000461437 ZNF274Q96GC6 653 aaPredicted RBP17.6■□□□□ 0.41
NUP50-213ENST00000461437 TGS1Q96RS0 853 aaKnown RBP17.6■□□□□ 0.41
NUP50-213ENST00000461437 TPCN1Q9ULQ1 816 aa17.6■□□□□ 0.41
NUP50-213ENST00000461437 KCNJ14Q9UNX9 436 aa17.6■□□□□ 0.41
NUP50-213ENST00000461437 COL4A6Q14031 1691 aa17.6■□□□□ 0.41
NUP50-213ENST00000461437 MSH4O15457 936 aa17.59■□□□□ 0.41
NUP50-213ENST00000461437 GTPBP6O43824 516 aaPredicted RBP17.59■□□□□ 0.41
NUP50-213ENST00000461437 TDP2O95551 362 aa17.59■□□□□ 0.41
NUP50-213ENST00000461437 IBSPP21815 317 aaPredicted RBP17.59■□□□□ 0.41
NUP50-213ENST00000461437 KLRC1P26715 233 aa17.59■□□□□ 0.41
NUP50-213ENST00000461437 ERVK-21P61565 698 aa17.59■□□□□ 0.41
NUP50-213ENST00000461437 NPY5RQ15761 445 aa17.59■□□□□ 0.41
NUP50-213ENST00000461437 MIS18BP1Q6P0N0 1132 aa17.59■□□□□ 0.41
NUP50-213ENST00000461437 BICD2Q8TD16 824 aa17.59■□□□□ 0.41
NUP50-213ENST00000461437 TBCKQ8TEA7 893 aa17.59■□□□□ 0.41
NUP50-213ENST00000461437 TOP1MTQ969P6 601 aa17.59■□□□□ 0.41
NUP50-213ENST00000461437 YME1L1Q96TA2 773 aa17.59■□□□□ 0.41
NUP50-213ENST00000461437 GINS2Q9Y248 185 aa17.59■□□□□ 0.41
NUP50-213ENST00000461437 INSL6Q9Y581 213 aa17.59■□□□□ 0.41
NUP50-213ENST00000461437 PCDHA2Q9Y5H9 948 aa17.59■□□□□ 0.41
NUP50-213ENST00000461437 TRPV2Q9Y5S1 764 aa17.59■□□□□ 0.41
NUP50-213ENST00000461437 ZBTB42B2RXF5 422 aa17.58■□□□□ 0.4
NUP50-213ENST00000461437 CHMP2AO43633 222 aa17.58■□□□□ 0.4
NUP50-213ENST00000461437 DEXIO95424 95 aa17.58■□□□□ 0.4
NUP50-213ENST00000461437 LARGE1O95461 756 aa17.58■□□□□ 0.4
NUP50-213ENST00000461437 SEC24BO95487 1268 aa17.58■□□□□ 0.4
NUP50-213ENST00000461437 CIITAP33076 1130 aa17.58■□□□□ 0.4
NUP50-213ENST00000461437 AK2P54819 239 aa17.58■□□□□ 0.4
NUP50-213ENST00000461437 SETQ01105 290 aaPredicted RBP17.58■□□□□ 0.4
NUP50-213ENST00000461437 TMEM266Q2M3C6 531 aa17.58■□□□□ 0.4
NUP50-213ENST00000461437 TJAP1Q5JTD0 557 aa17.58■□□□□ 0.4
NUP50-213ENST00000461437 FAM160B1Q5W0V3 765 aa17.58■□□□□ 0.4
NUP50-213ENST00000461437 CKAP2LQ8IYA6 745 aa17.58■□□□□ 0.4
NUP50-213ENST00000461437 SP7Q8TDD2 431 aaPredicted RBP17.58■□□□□ 0.4
NUP50-213ENST00000461437 ATP8B4Q8TF62 1192 aa17.58■□□□□ 0.4
NUP50-213ENST00000461437 APBB2Q92870 758 aa17.58■□□□□ 0.4
NUP50-213ENST00000461437 CDHR5Q9HBB8 845 aa17.58■□□□□ 0.4
NUP50-213ENST00000461437 GABBR1Q9UBS5 961 aa17.58■□□□□ 0.4
NUP50-213ENST00000461437 PCDHA4Q9UN74 947 aa17.58■□□□□ 0.4
NUP50-213ENST00000461437 XIRP2A4UGR9 3374 aa17.58■□□□□ 0.4
NUP50-213ENST00000461437 TTC28Q96AY4 2481 aa17.57■□□□□ 0.4
NUP50-213ENST00000461437 ENPP3O14638 875 aa17.57■□□□□ 0.4
NUP50-213ENST00000461437 HBP1O60381 514 aa17.57■□□□□ 0.4
NUP50-213ENST00000461437 UGCGQ16739 394 aa17.57■□□□□ 0.4
NUP50-213ENST00000461437 ZNF746Q6NUN9 644 aaPredicted RBP17.57■□□□□ 0.4
NUP50-213ENST00000461437 TSHZ1Q6ZSZ6 1077 aa17.57■□□□□ 0.4
NUP50-213ENST00000461437 RTN4RL1Q86UN2 441 aaPredicted RBP17.57■□□□□ 0.4
NUP50-213ENST00000461437 BLIDQ8IZY5 108 aa17.57■□□□□ 0.4
NUP50-213ENST00000461437 NECAB1Q8N987 351 aa17.57■□□□□ 0.4
NUP50-213ENST00000461437 SH3GLB2Q9NR46 395 aa17.57■□□□□ 0.4
NUP50-213ENST00000461437 TBC1D22BQ9NU19 505 aa17.57■□□□□ 0.4
NUP50-213ENST00000461437 SAMM50Q9Y512 469 aa17.57■□□□□ 0.4
NUP50-213ENST00000461437 MUC3AQ02505 3323 aa17.56■□□□□ 0.4
NUP50-213ENST00000461437 SMIM35A0A1B0GVV1 85 aa17.56■□□□□ 0.4
NUP50-213ENST00000461437 M0R2N6 131 aa17.56■□□□□ 0.4
NUP50-213ENST00000461437 CSPG5O95196 566 aa17.56■□□□□ 0.4
NUP50-213ENST00000461437 CTDNEP1O95476 244 aa17.56■□□□□ 0.4
NUP50-213ENST00000461437 POU3F3P20264 500 aaPredicted RBP17.56■□□□□ 0.4
NUP50-213ENST00000461437 KCNQ1P51787 676 aa17.56■□□□□ 0.4
NUP50-213ENST00000461437 MCTP2Q6DN12 878 aa17.56■□□□□ 0.4
NUP50-213ENST00000461437 FBXO22Q8NEZ5 403 aa17.56■□□□□ 0.4
NUP50-213ENST00000461437 ZNF668Q96K58 619 aaPredicted RBP17.56■□□□□ 0.4
NUP50-213ENST00000461437 NECAB3Q96P71 396 aaPredicted RBP17.56■□□□□ 0.4
NUP50-213ENST00000461437 ASB2Q96Q27 587 aa17.56■□□□□ 0.4
NUP50-213ENST00000461437 CELF4Q9BZC1 486 aaKnown RBP17.56■□□□□ 0.4
NUP50-213ENST00000461437 SLKQ9H2G2 1235 aaPredicted RBP17.56■□□□□ 0.4
NUP50-213ENST00000461437 UNC45AQ9H3U1 944 aa17.56■□□□□ 0.4
NUP50-213ENST00000461437 TCEAL9Q9UHQ7 104 aa17.56■□□□□ 0.4
NUP50-213ENST00000461437 FNDC1Q4ZHG4 1894 aaPredicted RBP17.56■□□□□ 0.4
NUP50-213ENST00000461437 M0QZ92 97 aa17.55■□□□□ 0.4
NUP50-213ENST00000461437 ZNF862O60290 1169 aa17.55■□□□□ 0.4
NUP50-213ENST00000461437 PSAPP07602 524 aa17.55■□□□□ 0.4
NUP50-213ENST00000461437 FOSBP53539 338 aa17.55■□□□□ 0.4
NUP50-213ENST00000461437 KRT76Q01546 638 aa17.55■□□□□ 0.4
NUP50-213ENST00000461437 INF2Q27J81 1249 aa17.55■□□□□ 0.4
NUP50-213ENST00000461437 EPC2Q52LR7 807 aa17.55■□□□□ 0.4
NUP50-213ENST00000461437 IER5Q5VY09 327 aa17.55■□□□□ 0.4
NUP50-213ENST00000461437 OXER1Q8TDS5 423 aa17.55■□□□□ 0.4
NUP50-213ENST00000461437 TMEM40Q8WWA1 233 aa17.55■□□□□ 0.4
NUP50-213ENST00000461437 ATXN2LQ8WWM7 1075 aaKnown RBP17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms