RNA–Protein interactions for RNA: ENST00000461154.1

SHANK1-205, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 4

Gene SHANK1, Length 558 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-205ENST00000461154 SPRYD3Q8NCJ5 442 aa18.26■□□□□ 0.51
SHANK1-205ENST00000461154 BBXQ8WY36 941 aaPredicted RBP18.26■□□□□ 0.51
SHANK1-205ENST00000461154 RNPC3Q96LT9 517 aaKnown RBP18.26■□□□□ 0.51
SHANK1-205ENST00000461154 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.26■□□□□ 0.51
SHANK1-205ENST00000461154 ZSCAN16Q9H4T2 348 aaPredicted RBP18.26■□□□□ 0.51
SHANK1-205ENST00000461154 EIF4ENIF1Q9NRA8 985 aaKnown RBP18.26■□□□□ 0.51
SHANK1-205ENST00000461154 SETD4Q9NVD3 440 aa18.26■□□□□ 0.51
SHANK1-205ENST00000461154 WDR81Q562E7 1941 aa18.25■□□□□ 0.51
SHANK1-205ENST00000461154 EML1O00423 815 aa18.25■□□□□ 0.51
SHANK1-205ENST00000461154 IQCF3P0C7M6 154 aa18.25■□□□□ 0.51
SHANK1-205ENST00000461154 ACRP10323 421 aa18.25■□□□□ 0.51
SHANK1-205ENST00000461154 INSRRP14616 1297 aa18.25■□□□□ 0.51
SHANK1-205ENST00000461154 RFC2P35250 354 aa18.25■□□□□ 0.51
SHANK1-205ENST00000461154 SPIRE1Q08AE8 756 aa18.25■□□□□ 0.51
SHANK1-205ENST00000461154 PTGDRQ13258 359 aa18.25■□□□□ 0.51
SHANK1-205ENST00000461154 TMEM240Q5SV17 173 aa18.25■□□□□ 0.51
SHANK1-205ENST00000461154 C16orf59Q7L2K0 433 aa18.25■□□□□ 0.51
SHANK1-205ENST00000461154 NEK9Q8TD19 979 aa18.25■□□□□ 0.51
SHANK1-205ENST00000461154 LMBR1Q8WVP7 490 aa18.25■□□□□ 0.51
SHANK1-205ENST00000461154 SCLYQ96I15 445 aa18.25■□□□□ 0.51
SHANK1-205ENST00000461154 CTAGE1Q96RT6 745 aa18.25■□□□□ 0.51
SHANK1-205ENST00000461154 NRBP2Q9NSY0 501 aa18.25■□□□□ 0.51
SHANK1-205ENST00000461154 CEP131Q9UPN4 1083 aa18.25■□□□□ 0.51
SHANK1-205ENST00000461154 COL1A2P08123 1366 aa18.25■□□□□ 0.51
SHANK1-205ENST00000461154 SOX1O00570 391 aaPredicted RBP18.24■□□□□ 0.51
SHANK1-205ENST00000461154 PARNO95453 639 aaKnown RBP18.24■□□□□ 0.51
SHANK1-205ENST00000461154 BMP15O95972 392 aa18.24■□□□□ 0.51
SHANK1-205ENST00000461154 FGBP02675 491 aa18.24■□□□□ 0.51
SHANK1-205ENST00000461154 OATP04181 439 aa18.24■□□□□ 0.51
SHANK1-205ENST00000461154 P4HBP07237 508 aaKnown RBP18.24■□□□□ 0.51
SHANK1-205ENST00000461154 PFKMP08237 780 aa18.24■□□□□ 0.51
SHANK1-205ENST00000461154 PRPHP41219 470 aa18.24■□□□□ 0.51
SHANK1-205ENST00000461154 PSMC5P62195 406 aa18.24■□□□□ 0.51
SHANK1-205ENST00000461154 ZNF200P98182 395 aaPredicted RBP18.24■□□□□ 0.51
SHANK1-205ENST00000461154 RBL2Q08999 1139 aa18.24■□□□□ 0.51
SHANK1-205ENST00000461154 RESTQ13127 1097 aa18.24■□□□□ 0.51
SHANK1-205ENST00000461154 ZNF484Q5JVG2 852 aa18.24■□□□□ 0.51
SHANK1-205ENST00000461154 GPR153Q6NV75 609 aa18.24■□□□□ 0.51
SHANK1-205ENST00000461154 ZNF365Q70YC5 407 aa18.24■□□□□ 0.51
SHANK1-205ENST00000461154 SERINC5Q86VE9 423 aa18.24■□□□□ 0.51
SHANK1-205ENST00000461154 C4orf32Q8N8J7 132 aa18.24■□□□□ 0.51
SHANK1-205ENST00000461154 RAB34Q9BZG1 259 aa18.24■□□□□ 0.51
SHANK1-205ENST00000461154 MTIF3Q9H2K0 278 aaKnown RBP18.24■□□□□ 0.51
SHANK1-205ENST00000461154 TUBE1Q9UJT0 475 aa18.24■□□□□ 0.51
SHANK1-205ENST00000461154 TREHO43280 583 aa18.23■□□□□ 0.51
SHANK1-205ENST00000461154 RPLP2P05387 115 aaKnown RBP18.23■□□□□ 0.51
SHANK1-205ENST00000461154 SELPP16109 830 aa18.23■□□□□ 0.51
SHANK1-205ENST00000461154 ATP4AP20648 1035 aa18.23■□□□□ 0.51
SHANK1-205ENST00000461154 TECP42680 631 aa18.23■□□□□ 0.51
SHANK1-205ENST00000461154 QARSP47897 775 aaKnown RBP18.23■□□□□ 0.51
SHANK1-205ENST00000461154 IGBP1P78318 339 aa18.23■□□□□ 0.51
SHANK1-205ENST00000461154 ADAM17P78536 824 aa18.23■□□□□ 0.51
SHANK1-205ENST00000461154 PRKCEQ02156 737 aa18.23■□□□□ 0.51
SHANK1-205ENST00000461154 HIC1Q14526 733 aa18.23■□□□□ 0.51
SHANK1-205ENST00000461154 TAF2Q6P1X5 1199 aa18.23■□□□□ 0.51
SHANK1-205ENST00000461154 BANK1Q8NDB2 785 aa18.23■□□□□ 0.51
SHANK1-205ENST00000461154 ERMNQ8TAM6 284 aa18.23■□□□□ 0.51
SHANK1-205ENST00000461154 DHX38Q92620 1227 aaKnown RBP18.23■□□□□ 0.51
SHANK1-205ENST00000461154 LRCH3Q96II8 777 aa18.23■□□□□ 0.51
SHANK1-205ENST00000461154 TRIP12Q14669 1992 aaPredicted RBP18.22■□□□□ 0.51
SHANK1-205ENST00000461154 MBLAC1A4D2B0 266 aaPredicted RBP18.22■□□□□ 0.51
SHANK1-205ENST00000461154 ZNF862O60290 1169 aa18.22■□□□□ 0.51
SHANK1-205ENST00000461154 FXR2P51116 673 aaKnown RBP eCLIP18.22■□□□□ 0.51
SHANK1-205ENST00000461154 UGCGQ16739 394 aa18.22■□□□□ 0.51
SHANK1-205ENST00000461154 XKR3Q5GH77 459 aa18.22■□□□□ 0.51
SHANK1-205ENST00000461154 TRMT1LQ7Z2T5 733 aaKnown RBP18.22■□□□□ 0.51
SHANK1-205ENST00000461154 HERVK_113Q902F9 699 aa18.22■□□□□ 0.51
SHANK1-205ENST00000461154 ZSWIM4Q9H7M6 989 aa18.22■□□□□ 0.51
SHANK1-205ENST00000461154 STK24Q9Y6E0 443 aa18.22■□□□□ 0.51
SHANK1-205ENST00000461154 HSFX4A0A1B0GTS1 333 aaPredicted RBP18.21■□□□□ 0.51
SHANK1-205ENST00000461154 HSFX3A0A1B0GWH4 333 aaPredicted RBP18.21■□□□□ 0.51
SHANK1-205ENST00000461154 POTEMA6NI47 508 aa18.21■□□□□ 0.51
SHANK1-205ENST00000461154 CAND2O75155 1236 aa18.21■□□□□ 0.51
SHANK1-205ENST00000461154 CKBP12277 381 aa18.21■□□□□ 0.51
SHANK1-205ENST00000461154 SMAD3P84022 425 aaKnown RBP18.21■□□□□ 0.51
SHANK1-205ENST00000461154 ATP2C1P98194 919 aaPredicted RBP18.21■□□□□ 0.51
SHANK1-205ENST00000461154 PDIA5Q14554 519 aa18.21■□□□□ 0.51
SHANK1-205ENST00000461154 TRIM71Q2Q1W2 868 aaKnown RBP18.21■□□□□ 0.51
SHANK1-205ENST00000461154 RASIP1Q5U651 963 aa18.21■□□□□ 0.51
SHANK1-205ENST00000461154 ARL6IP4Q66PJ3 421 aaKnown RBP18.21■□□□□ 0.51
SHANK1-205ENST00000461154 DTHD1Q6ZMT9 781 aa18.21■□□□□ 0.51
SHANK1-205ENST00000461154 LRRC8DQ7L1W4 858 aa18.21■□□□□ 0.51
SHANK1-205ENST00000461154 DEFB128Q7Z7B8 93 aa18.21■□□□□ 0.51
SHANK1-205ENST00000461154 RSPH3Q86UC2 560 aa18.21■□□□□ 0.51
SHANK1-205ENST00000461154 DYDC2Q96IM9 177 aa18.21■□□□□ 0.51
SHANK1-205ENST00000461154 EIF2AK1Q9BQI3 630 aaKnown RBP18.21■□□□□ 0.51
SHANK1-205ENST00000461154 LXNQ9BS40 222 aa18.21■□□□□ 0.51
SHANK1-205ENST00000461154 SEPT9Q9UHD8 586 aaPredicted RBP18.21■□□□□ 0.51
SHANK1-205ENST00000461154 ZSCAN22P10073 491 aaPredicted RBP18.2■□□□□ 0.5
SHANK1-205ENST00000461154 ACTN1P12814 892 aa18.2■□□□□ 0.5
SHANK1-205ENST00000461154 THPOP40225 353 aa18.2■□□□□ 0.5
SHANK1-205ENST00000461154 CYP4A11Q02928 519 aa18.2■□□□□ 0.5
SHANK1-205ENST00000461154 MARCH8Q5T0T0 291 aa18.2■□□□□ 0.5
SHANK1-205ENST00000461154 HAUS3Q68CZ6 603 aa18.2■□□□□ 0.5
SHANK1-205ENST00000461154 TPH2Q8IWU9 490 aa18.2■□□□□ 0.5
SHANK1-205ENST00000461154 C4orf19Q8IY42 314 aa18.2■□□□□ 0.5
SHANK1-205ENST00000461154 TRAPPC12Q8WVT3 735 aa18.2■□□□□ 0.5
SHANK1-205ENST00000461154 NIFKQ9BYG3 293 aaKnown RBP18.2■□□□□ 0.5
SHANK1-205ENST00000461154 RGL1Q9NZL6 768 aa18.2■□□□□ 0.5
SHANK1-205ENST00000461154 PCDHA2Q9Y5H9 948 aa18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms