RNA–Protein interactions for RNA: ENST00000460112.3

SHROOM4-203, Transcript of shroom family member 4, humanhuman

TSL 5 BASIC

Gene SHROOM4, Length 8,919 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4-203ENST00000460112 SERTAD1Q9UHV2 236 aa9.53□□□□□ -0.88
SHROOM4-203ENST00000460112 FRMPD2Q68DX3 1309 aaPredicted RBP9.53□□□□□ -0.88
SHROOM4-203ENST00000460112 TAF5LO75529 589 aa9.53□□□□□ -0.88
SHROOM4-203ENST00000460112 TOM1L1O75674 476 aa9.53□□□□□ -0.88
SHROOM4-203ENST00000460112 LDHAP00338 332 aaKnown RBP9.53□□□□□ -0.88
SHROOM4-203ENST00000460112 SMARCA1P28370 1054 aa9.53□□□□□ -0.88
SHROOM4-203ENST00000460112 ANKRD27Q96NW4 1050 aa9.53□□□□□ -0.88
SHROOM4-203ENST00000460112 GPR108Q9NPR9 543 aa9.53□□□□□ -0.88
SHROOM4-203ENST00000460112 SERPINI2O75830 405 aa9.53□□□□□ -0.88
SHROOM4-203ENST00000460112 BTDP43251 543 aa9.53□□□□□ -0.88
SHROOM4-203ENST00000460112 SARM1Q6SZW1 724 aa9.53□□□□□ -0.88
SHROOM4-203ENST00000460112 LRRC31Q6UY01 552 aa9.53□□□□□ -0.88
SHROOM4-203ENST00000460112 EYA1Q99502 592 aa9.53□□□□□ -0.88
SHROOM4-203ENST00000460112 RPF1Q9H9Y2 349 aaKnown RBP9.53□□□□□ -0.88
SHROOM4-203ENST00000460112 PCDHB8Q9UN66 801 aa9.53□□□□□ -0.88
SHROOM4-203ENST00000460112 ABCA9Q8IUA7 1624 aa9.53□□□□□ -0.88
SHROOM4-203ENST00000460112 PPEF1O14829 653 aaPredicted RBP9.52□□□□□ -0.88
SHROOM4-203ENST00000460112 TJP3O95049 919 aa9.52□□□□□ -0.88
SHROOM4-203ENST00000460112 ZBED1O96006 694 aa9.52□□□□□ -0.88
SHROOM4-203ENST00000460112 E2F4Q16254 413 aa9.52□□□□□ -0.88
SHROOM4-203ENST00000460112 KYAT1Q16773 422 aa9.52□□□□□ -0.88
SHROOM4-203ENST00000460112 ARMC2Q8NEN0 867 aa9.52□□□□□ -0.88
SHROOM4-203ENST00000460112 INO80BQ9C086 356 aaPredicted RBP9.52□□□□□ -0.88
SHROOM4-203ENST00000460112 DPH5Q9H2P9 285 aa9.52□□□□□ -0.88
SHROOM4-203ENST00000460112 ARHGAP26Q9UNA1 814 aa9.52□□□□□ -0.88
SHROOM4-203ENST00000460112 NCAPD2Q15021 1401 aa9.52□□□□□ -0.88
SHROOM4-203ENST00000460112 CFAP73A6NFT4 308 aa9.52□□□□□ -0.88
SHROOM4-203ENST00000460112 HNRNPRO43390 633 aaKnown RBP9.52□□□□□ -0.88
SHROOM4-203ENST00000460112 MDM2Q00987 491 aaPredicted RBP9.52□□□□□ -0.88
SHROOM4-203ENST00000460112 GUCY2DQ02846 1103 aa9.52□□□□□ -0.88
SHROOM4-203ENST00000460112 CCDC127Q96BQ5 260 aa9.52□□□□□ -0.88
SHROOM4-203ENST00000460112 USP21Q9UK80 565 aa9.52□□□□□ -0.88
SHROOM4-203ENST00000460112 EPN1Q9Y6I3 576 aaPredicted RBP9.52□□□□□ -0.88
SHROOM4-203ENST00000460112 CAPN11Q9UMQ6 739 aa9.52□□□□□ -0.89
SHROOM4-203ENST00000460112 ABCA8O94911 1581 aa9.52□□□□□ -0.89
SHROOM4-203ENST00000460112 CROCCQ5TZA2 2017 aa9.52□□□□□ -0.89
SHROOM4-203ENST00000460112 APBA3O96018 575 aa9.52□□□□□ -0.89
SHROOM4-203ENST00000460112 TSPY1Q01534 308 aa9.52□□□□□ -0.89
SHROOM4-203ENST00000460112 LRRC8BQ6P9F7 803 aa9.52□□□□□ -0.89
SHROOM4-203ENST00000460112 NLGN1Q8N2Q7 840 aa9.52□□□□□ -0.89
SHROOM4-203ENST00000460112 FAM149B1Q96BN6 582 aa9.52□□□□□ -0.89
SHROOM4-203ENST00000460112 MPP6Q9NZW5 540 aa9.52□□□□□ -0.89
SHROOM4-203ENST00000460112 LEMD3Q9Y2U8 911 aa9.52□□□□□ -0.89
SHROOM4-203ENST00000460112 FRMPD1Q5SYB0 1578 aa9.52□□□□□ -0.89
SHROOM4-203ENST00000460112 SETBP1Q9Y6X0 1596 aa9.52□□□□□ -0.89
SHROOM4-203ENST00000460112 CHUKO15111 745 aa9.52□□□□□ -0.89
SHROOM4-203ENST00000460112 SPAG7O75391 227 aa9.52□□□□□ -0.89
SHROOM4-203ENST00000460112 KRT38O76015 456 aa9.52□□□□□ -0.89
SHROOM4-203ENST00000460112 RPSAP08865 295 aaKnown RBP9.52□□□□□ -0.89
SHROOM4-203ENST00000460112 ADKP55263 362 aaKnown RBP9.52□□□□□ -0.89
SHROOM4-203ENST00000460112 MOV10L1Q9BXT6 1211 aaKnown RBP9.52□□□□□ -0.89
SHROOM4-203ENST00000460112 ZSWIM6Q9HCJ5 1215 aa9.52□□□□□ -0.89
SHROOM4-203ENST00000460112 CYP26B1Q9NR63 512 aa9.52□□□□□ -0.89
SHROOM4-203ENST00000460112 KIAA1024Q9UPX6 916 aa9.52□□□□□ -0.89
SHROOM4-203ENST00000460112 MAPK13O15264 365 aa9.52□□□□□ -0.89
SHROOM4-203ENST00000460112 CALB1P05937 261 aa9.52□□□□□ -0.89
SHROOM4-203ENST00000460112 GTF2IP78347 998 aa9.52□□□□□ -0.89
SHROOM4-203ENST00000460112 SKOR1P84550 965 aa9.52□□□□□ -0.89
SHROOM4-203ENST00000460112 C6orf118Q5T5N4 469 aa9.52□□□□□ -0.89
SHROOM4-203ENST00000460112 CATSPER1Q8NEC5 780 aa9.52□□□□□ -0.89
SHROOM4-203ENST00000460112 KANSL2Q9H9L4 492 aa9.52□□□□□ -0.89
SHROOM4-203ENST00000460112 GOLGA8IPA6NC78 632 aa9.52□□□□□ -0.89
SHROOM4-203ENST00000460112 INO80B-WBP1J3KQ70 363 aa9.52□□□□□ -0.89
SHROOM4-203ENST00000460112 SLC26A4O43511 780 aa9.52□□□□□ -0.89
SHROOM4-203ENST00000460112 BASP1P80723 227 aaKnown RBP9.52□□□□□ -0.89
SHROOM4-203ENST00000460112 TTC23LQ6PF05 361 aa9.52□□□□□ -0.89
SHROOM4-203ENST00000460112 C16orf87Q6PH81 154 aa9.52□□□□□ -0.89
SHROOM4-203ENST00000460112 TTC13Q8NBP0 860 aa9.52□□□□□ -0.89
SHROOM4-203ENST00000460112 TTC8Q8TAM2 541 aa9.52□□□□□ -0.89
SHROOM4-203ENST00000460112 ACAP3Q96P50 834 aa9.52□□□□□ -0.89
SHROOM4-203ENST00000460112 APOL6Q9BWW8 343 aa9.52□□□□□ -0.89
SHROOM4-203ENST00000460112 SENP1Q9P0U3 644 aa9.52□□□□□ -0.89
SHROOM4-203ENST00000460112 MAP1BP46821 2468 aaKnown RBP9.52□□□□□ -0.89
SHROOM4-203ENST00000460112 SYNGAP1Q96PV0 1343 aa9.52□□□□□ -0.89
SHROOM4-203ENST00000460112 MAP3K4Q9Y6R4 1608 aa9.52□□□□□ -0.89
SHROOM4-203ENST00000460112 DPYSL4O14531 572 aa9.51□□□□□ -0.89
SHROOM4-203ENST00000460112 NEK2P51955 445 aa9.51□□□□□ -0.89
SHROOM4-203ENST00000460112 MKRN3Q13064 507 aaKnown RBP9.51□□□□□ -0.89
SHROOM4-203ENST00000460112 ARL6IP4Q66PJ3 421 aaKnown RBP9.51□□□□□ -0.89
SHROOM4-203ENST00000460112 TRMT10CQ7L0Y3 403 aaKnown RBP9.51□□□□□ -0.89
SHROOM4-203ENST00000460112 MAGOHBQ96A72 148 aaKnown RBP9.51□□□□□ -0.89
SHROOM4-203ENST00000460112 RBM41Q96IZ5 413 aaKnown RBP9.51□□□□□ -0.89
SHROOM4-203ENST00000460112 CIAO1O76071 339 aa9.51□□□□□ -0.89
SHROOM4-203ENST00000460112 KRT16P08779 473 aa9.51□□□□□ -0.89
SHROOM4-203ENST00000460112 HSPA1AP0DMV8 641 aaKnown RBP9.51□□□□□ -0.89
SHROOM4-203ENST00000460112 HSPA1BP0DMV9 641 aaKnown RBP9.51□□□□□ -0.89
SHROOM4-203ENST00000460112 POLE2P56282 527 aa9.51□□□□□ -0.89
SHROOM4-203ENST00000460112 MAN2A1Q16706 1144 aa9.51□□□□□ -0.89
SHROOM4-203ENST00000460112 ITPRIPL1Q6GPH6 555 aa9.51□□□□□ -0.89
SHROOM4-203ENST00000460112 ARHGEF1Q92888 912 aaKnown RBP9.51□□□□□ -0.89
SHROOM4-203ENST00000460112 CFAP36Q96G28 342 aa9.51□□□□□ -0.89
SHROOM4-203ENST00000460112 RNF26Q9BY78 433 aaPredicted RBP9.51□□□□□ -0.89
SHROOM4-203ENST00000460112 ATG3Q9NT62 314 aa9.51□□□□□ -0.89
SHROOM4-203ENST00000460112 SNX5Q9Y5X3 404 aa9.51□□□□□ -0.89
SHROOM4-203ENST00000460112 E2F6O75461 281 aa9.51□□□□□ -0.89
SHROOM4-203ENST00000460112 HSPA4LO95757 839 aa9.51□□□□□ -0.89
SHROOM4-203ENST00000460112 ATP1A2P50993 1020 aa9.51□□□□□ -0.89
SHROOM4-203ENST00000460112 CAPN12Q6ZSI9 719 aa9.51□□□□□ -0.89
SHROOM4-203ENST00000460112 RHOT2Q8IXI1 618 aa9.51□□□□□ -0.89
SHROOM4-203ENST00000460112 IFNL3Q8IZI9 196 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms