RNA–Protein interactions for RNA: ENST00000460023.5

CCDC78-205, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 789 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-205ENST00000460023 SAMM50Q9Y512 469 aa24.29■■□□□ 1.48
CCDC78-205ENST00000460023 POU3F3P20264 500 aaPredicted RBP24.28■■□□□ 1.48
CCDC78-205ENST00000460023 MRPS6P82932 125 aaKnown RBP24.28■■□□□ 1.48
CCDC78-205ENST00000460023 MGAT3Q09327 533 aa24.28■■□□□ 1.48
CCDC78-205ENST00000460023 MTHFD1LQ6UB35 978 aa24.28■■□□□ 1.48
CCDC78-205ENST00000460023 CCDC60Q8IWA6 550 aaPredicted RBP24.28■■□□□ 1.48
CCDC78-205ENST00000460023 CKAP2LQ8IYA6 745 aa24.28■■□□□ 1.48
CCDC78-205ENST00000460023 RDM1Q8NG50 284 aa24.28■■□□□ 1.48
CCDC78-205ENST00000460023 TOP1MTQ969P6 601 aa24.28■■□□□ 1.48
CCDC78-205ENST00000460023 FAM167AQ96KS9 214 aa24.28■■□□□ 1.48
CCDC78-205ENST00000460023 NAP1L4Q99733 375 aaKnown RBP24.28■■□□□ 1.48
CCDC78-205ENST00000460023 MSH4O15457 936 aa24.27■■□□□ 1.48
CCDC78-205ENST00000460023 GAS7O60861 476 aa24.27■■□□□ 1.48
CCDC78-205ENST00000460023 IGFBP4P22692 258 aa24.27■■□□□ 1.48
CCDC78-205ENST00000460023 JAK3P52333 1124 aa24.27■■□□□ 1.48
CCDC78-205ENST00000460023 TCTN1Q2MV58 587 aa24.27■■□□□ 1.48
CCDC78-205ENST00000460023 MYOCDQ8IZQ8 938 aa24.27■■□□□ 1.48
CCDC78-205ENST00000460023 ZNF710Q8N1W2 664 aa24.27■■□□□ 1.48
CCDC78-205ENST00000460023 SLC5A5Q92911 643 aa24.27■■□□□ 1.48
CCDC78-205ENST00000460023 TEKT3Q9BXF9 490 aa24.27■■□□□ 1.48
CCDC78-205ENST00000460023 ORC3Q9UBD5 711 aaPredicted RBP24.27■■□□□ 1.48
CCDC78-205ENST00000460023 CDY2AQ9Y6F7 541 aa24.27■■□□□ 1.48
CCDC78-205ENST00000460023 CDH23Q9H251 3354 aa24.27■■□□□ 1.48
CCDC78-205ENST00000460023 CCDC194A0A1B0GVG4 234 aa24.26■■□□□ 1.47
CCDC78-205ENST00000460023 GTPBP6O43824 516 aaPredicted RBP24.26■■□□□ 1.47
CCDC78-205ENST00000460023 KLRC1P26715 233 aa24.26■■□□□ 1.47
CCDC78-205ENST00000460023 NPY5RQ15761 445 aa24.26■■□□□ 1.47
CCDC78-205ENST00000460023 FBXO47Q5MNV8 452 aa24.26■■□□□ 1.47
CCDC78-205ENST00000460023 LIN28BQ6ZN17 250 aaKnown RBP eCLIP24.26■■□□□ 1.47
CCDC78-205ENST00000460023 TSHZ1Q6ZSZ6 1077 aa24.26■■□□□ 1.47
CCDC78-205ENST00000460023 FTHL17Q9BXU8 183 aa24.26■■□□□ 1.47
CCDC78-205ENST00000460023 DISC1Q9NRI5 854 aa24.26■■□□□ 1.47
CCDC78-205ENST00000460023 NRBP2Q9NSY0 501 aa24.26■■□□□ 1.47
CCDC78-205ENST00000460023 KDM3AQ9Y4C1 1321 aa24.26■■□□□ 1.47
CCDC78-205ENST00000460023 EDIL3O43854 480 aa24.25■■□□□ 1.47
CCDC78-205ENST00000460023 HTRA4P83105 476 aaPredicted RBP24.25■■□□□ 1.47
CCDC78-205ENST00000460023 ADGRE1Q14246 886 aa24.25■■□□□ 1.47
CCDC78-205ENST00000460023 ODR4Q5SWX8 454 aa24.25■■□□□ 1.47
CCDC78-205ENST00000460023 LRCH2Q5VUJ6 765 aa24.25■■□□□ 1.47
CCDC78-205ENST00000460023 GTF3C6Q969F1 213 aa24.25■■□□□ 1.47
CCDC78-205ENST00000460023 MBOAT7Q96N66 472 aa24.25■■□□□ 1.47
CCDC78-205ENST00000460023 AIFM3Q96NN9 605 aa24.25■■□□□ 1.47
CCDC78-205ENST00000460023 CELF4Q9BZC1 486 aaKnown RBP24.25■■□□□ 1.47
CCDC78-205ENST00000460023 FAM49AQ9H0Q0 323 aaPredicted RBP24.25■■□□□ 1.47
CCDC78-205ENST00000460023 BRMS1Q9HCU9 246 aa24.25■■□□□ 1.47
CCDC78-205ENST00000460023 TRPV2Q9Y5S1 764 aa24.25■■□□□ 1.47
CCDC78-205ENST00000460023 CHD9Q3L8U1 2897 aa24.25■■□□□ 1.47
CCDC78-205ENST00000460023 MYH9P35579 1960 aaKnown RBP24.24■■□□□ 1.47
CCDC78-205ENST00000460023 MICAL3Q7RTP6 2002 aa24.24■■□□□ 1.47
CCDC78-205ENST00000460023 MAGEB2O15479 319 aa24.24■■□□□ 1.47
CCDC78-205ENST00000460023 GHRP10912 638 aa24.24■■□□□ 1.47
CCDC78-205ENST00000460023 GCFC2P16383 781 aaKnown RBP24.24■■□□□ 1.47
CCDC78-205ENST00000460023 LPIN1Q14693 890 aa24.24■■□□□ 1.47
CCDC78-205ENST00000460023 ME3Q16798 604 aa24.24■■□□□ 1.47
CCDC78-205ENST00000460023 ARNTL2Q8WYA1 636 aa24.24■■□□□ 1.47
CCDC78-205ENST00000460023 TGS1Q96RS0 853 aaKnown RBP24.24■■□□□ 1.47
CCDC78-205ENST00000460023 TSPYL2Q9H2G4 693 aaPredicted RBP24.24■■□□□ 1.47
CCDC78-205ENST00000460023 LMCD1Q9NZU5 365 aa24.24■■□□□ 1.47
CCDC78-205ENST00000460023 GABBR1Q9UBS5 961 aa24.24■■□□□ 1.47
CCDC78-205ENST00000460023 KCNJ14Q9UNX9 436 aa24.24■■□□□ 1.47
CCDC78-205ENST00000460023 ATP4AP20648 1035 aa24.23■■□□□ 1.47
CCDC78-205ENST00000460023 ERVK-21P61565 698 aa24.23■■□□□ 1.47
CCDC78-205ENST00000460023 PPP4R3AQ6IN85 833 aa24.23■■□□□ 1.47
CCDC78-205ENST00000460023 SAMD11Q96NU1 681 aa24.23■■□□□ 1.47
CCDC78-205ENST00000460023 LOC101059915A0A1B0GWI6 518 aaPredicted RBP24.22■■□□□ 1.47
CCDC78-205ENST00000460023 PSMD10O75832 226 aa24.22■■□□□ 1.47
CCDC78-205ENST00000460023 CTDNEP1O95476 244 aa24.22■■□□□ 1.47
CCDC78-205ENST00000460023 SEC24BO95487 1268 aa24.22■■□□□ 1.47
CCDC78-205ENST00000460023 TMCO2Q7Z6W1 182 aaPredicted RBP24.22■■□□□ 1.47
CCDC78-205ENST00000460023 NEK8Q86SG6 692 aa24.22■■□□□ 1.47
CCDC78-205ENST00000460023 IL27Q8NEV9 243 aa24.22■■□□□ 1.47
CCDC78-205ENST00000460023 TRAPPC12Q8WVT3 735 aa24.22■■□□□ 1.47
CCDC78-205ENST00000460023 FAM20AQ96MK3 541 aa24.22■■□□□ 1.47
CCDC78-205ENST00000460023 UIMC1Q96RL1 719 aa24.22■■□□□ 1.47
CCDC78-205ENST00000460023 RNF216Q9NWF9 866 aaPredicted RBP24.22■■□□□ 1.47
CCDC78-205ENST00000460023 DDX25Q9UHL0 483 aaKnown RBP24.22■■□□□ 1.47
CCDC78-205ENST00000460023 PTPRSQ13332 1948 aa24.22■■□□□ 1.47
CCDC78-205ENST00000460023 IGSF9BQ9UPX0 1349 aa24.21■■□□□ 1.47
CCDC78-205ENST00000460023 TMOD1P28289 359 aa24.21■■□□□ 1.47
CCDC78-205ENST00000460023 INF2Q27J81 1249 aa24.21■■□□□ 1.47
CCDC78-205ENST00000460023 FAM117BQ6P1L5 589 aa24.21■■□□□ 1.47
CCDC78-205ENST00000460023 SP7Q8TDD2 431 aaPredicted RBP24.21■■□□□ 1.47
CCDC78-205ENST00000460023 YME1L1Q96TA2 773 aa24.21■■□□□ 1.47
CCDC78-205ENST00000460023 OSBPL7Q9BZF2 842 aa24.21■■□□□ 1.47
CCDC78-205ENST00000460023 LCHNA4D1U4 455 aa24.2■■□□□ 1.46
CCDC78-205ENST00000460023 LINC01553A4QN01 128 aa24.2■■□□□ 1.46
CCDC78-205ENST00000460023 DLL1O00548 723 aa24.2■■□□□ 1.46
CCDC78-205ENST00000460023 ENPP3O14638 875 aa24.2■■□□□ 1.46
CCDC78-205ENST00000460023 TBX3O15119 743 aa24.2■■□□□ 1.46
CCDC78-205ENST00000460023 TDP2O95551 362 aa24.2■■□□□ 1.46
CCDC78-205ENST00000460023 TRIM29Q14134 588 aa24.2■■□□□ 1.46
CCDC78-205ENST00000460023 LETM2Q2VYF4 491 aa24.2■■□□□ 1.46
CCDC78-205ENST00000460023 MIER3Q7Z3K6 550 aa24.2■■□□□ 1.46
CCDC78-205ENST00000460023 KIAA0319LQ8IZA0 1049 aa24.2■■□□□ 1.46
CCDC78-205ENST00000460023 NECAB1Q8N987 351 aa24.2■■□□□ 1.46
CCDC78-205ENST00000460023 CERS4Q9HA82 394 aa24.2■■□□□ 1.46
CCDC78-205ENST00000460023 LIMCH1Q9UPQ0 1083 aa24.2■■□□□ 1.46
CCDC78-205ENST00000460023 ZBTB42B2RXF5 422 aa24.19■■□□□ 1.46
CCDC78-205ENST00000460023 DKC1O60832 514 aaKnown RBP eCLIP24.19■■□□□ 1.46
CCDC78-205ENST00000460023 OATP04181 439 aa24.19■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms