RNA–Protein interactions for RNA: ENST00000459902.1

CKAP2-204, Transcript of cytoskeleton associated protein 2, humanhuman

TSL 2

Gene CKAP2, Length 798 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-204ENST00000459902 ASB1Q9Y576 335 aa8.75□□□□□ -1.01
CKAP2-204ENST00000459902 COL4A3BPQ9Y5P4 624 aa8.75□□□□□ -1.01
CKAP2-204ENST00000459902 GOLGA6L22H0YM25 854 aa8.74□□□□□ -1.01
CKAP2-204ENST00000459902 RFXAPO00287 272 aa8.74□□□□□ -1.01
CKAP2-204ENST00000459902 PTGS1P23219 599 aa8.74□□□□□ -1.01
CKAP2-204ENST00000459902 FNTBP49356 437 aa8.74□□□□□ -1.01
CKAP2-204ENST00000459902 DLX2Q07687 328 aaPredicted RBP8.74□□□□□ -1.01
CKAP2-204ENST00000459902 LHFPL2Q6ZUX7 228 aa8.74□□□□□ -1.01
CKAP2-204ENST00000459902 DDX42Q86XP3 938 aaKnown RBP eCLIP8.74□□□□□ -1.01
CKAP2-204ENST00000459902 HIPK4Q8NE63 616 aa8.74□□□□□ -1.01
CKAP2-204ENST00000459902 ERCC4Q92889 916 aaPredicted RBP8.74□□□□□ -1.01
CKAP2-204ENST00000459902 FOXRED1Q96CU9 486 aaPredicted RBP8.74□□□□□ -1.01
CKAP2-204ENST00000459902 C16orf92Q96LL3 132 aa8.74□□□□□ -1.01
CKAP2-204ENST00000459902 CLIC6Q96NY7 704 aa8.74□□□□□ -1.01
CKAP2-204ENST00000459902 PCDH12Q9NPG4 1184 aa8.74□□□□□ -1.01
CKAP2-204ENST00000459902 PRAMEF22A3QJZ6 481 aa8.73□□□□□ -1.01
CKAP2-204ENST00000459902 MPIG6BO95866 241 aa8.73□□□□□ -1.01
CKAP2-204ENST00000459902 GLRBP48167 497 aa8.73□□□□□ -1.01
CKAP2-204ENST00000459902 SMAD3P84022 425 aaKnown RBP8.73□□□□□ -1.01
CKAP2-204ENST00000459902 STAT4Q14765 748 aa8.73□□□□□ -1.01
CKAP2-204ENST00000459902 SMAD2Q15796 467 aaKnown RBP8.73□□□□□ -1.01
CKAP2-204ENST00000459902 VWA3BQ502W6 1294 aa8.73□□□□□ -1.01
CKAP2-204ENST00000459902 PRAMEF18Q5VWM3 479 aa8.73□□□□□ -1.01
CKAP2-204ENST00000459902 ESRP1Q6NXG1 681 aaKnown RBP8.73□□□□□ -1.01
CKAP2-204ENST00000459902 SAPCD2Q86UD0 394 aa8.73□□□□□ -1.01
CKAP2-204ENST00000459902 RTN4RL1Q86UN2 441 aaPredicted RBP8.73□□□□□ -1.01
CKAP2-204ENST00000459902 C11orf74Q86VG3 221 aa8.73□□□□□ -1.01
CKAP2-204ENST00000459902 CILP2Q8IUL8 1156 aa8.73□□□□□ -1.01
CKAP2-204ENST00000459902 ZNF526Q8TF50 670 aaPredicted RBP8.73□□□□□ -1.01
CKAP2-204ENST00000459902 ARHGAP20Q9P2F6 1191 aa8.73□□□□□ -1.01
CKAP2-204ENST00000459902 ATP8A1Q9Y2Q0 1164 aa8.73□□□□□ -1.01
CKAP2-204ENST00000459902 BRINP1O60477 761 aa8.72□□□□□ -1.01
CKAP2-204ENST00000459902 IL18BPO95998 194 aa8.72□□□□□ -1.01
CKAP2-204ENST00000459902 CPEP16870 476 aa8.72□□□□□ -1.01
CKAP2-204ENST00000459902 CAP1Q01518 475 aa8.72□□□□□ -1.01
CKAP2-204ENST00000459902 ATP13A4Q4VNC1 1196 aa8.72□□□□□ -1.01
CKAP2-204ENST00000459902 PASD1Q8IV76 773 aa8.72□□□□□ -1.01
CKAP2-204ENST00000459902 ATL2Q8NHH9 583 aa8.72□□□□□ -1.01
CKAP2-204ENST00000459902 AMNQ9BXJ7 453 aa8.72□□□□□ -1.01
CKAP2-204ENST00000459902 ZMAT4Q9H898 229 aa8.72□□□□□ -1.01
CKAP2-204ENST00000459902 INCENPQ9NQS7 918 aa8.72□□□□□ -1.01
CKAP2-204ENST00000459902 GALNT8Q9NY28 637 aa8.72□□□□□ -1.01
CKAP2-204ENST00000459902 CROTQ9UKG9 612 aa8.72□□□□□ -1.01
CKAP2-204ENST00000459902 AFF3P51826 1226 aaKnown RBP8.71□□□□□ -1.02
CKAP2-204ENST00000459902 PRR31Q5SQ13 230 aa8.71□□□□□ -1.02
CKAP2-204ENST00000459902 ZCRB1Q8TBF4 217 aaKnown RBP8.71□□□□□ -1.02
CKAP2-204ENST00000459902 SCYL1Q96KG9 808 aa8.71□□□□□ -1.02
CKAP2-204ENST00000459902 IRF2BPLQ9H1B7 796 aa8.71□□□□□ -1.02
CKAP2-204ENST00000459902 ZFP69BQ9UJL9 534 aa8.71□□□□□ -1.02
CKAP2-204ENST00000459902 APOBEC2Q9Y235 224 aaKnown RBP8.71□□□□□ -1.02
CKAP2-204ENST00000459902 FFAR3O14843 346 aa8.7□□□□□ -1.02
CKAP2-204ENST00000459902 NUAK1O60285 661 aa8.7□□□□□ -1.02
CKAP2-204ENST00000459902 EPHA7Q15375 998 aa8.7□□□□□ -1.02
CKAP2-204ENST00000459902 TERF2Q15554 542 aa8.7□□□□□ -1.02
CKAP2-204ENST00000459902 BROXQ5VW32 411 aa8.7□□□□□ -1.02
CKAP2-204ENST00000459902 LRSAM1Q6UWE0 723 aa8.7□□□□□ -1.02
CKAP2-204ENST00000459902 ADGRG2Q8IZP9 1017 aa8.7□□□□□ -1.02
CKAP2-204ENST00000459902 STPG3Q8N7X2 389 aa8.7□□□□□ -1.02
CKAP2-204ENST00000459902 WDR66Q8TBY9 1149 aa8.7□□□□□ -1.02
CKAP2-204ENST00000459902 SLC5A5Q92911 643 aa8.7□□□□□ -1.02
CKAP2-204ENST00000459902 TACO1Q9BSH4 297 aaKnown RBP8.7□□□□□ -1.02
CKAP2-204ENST00000459902 BRINP2Q9C0B6 783 aa8.7□□□□□ -1.02
CKAP2-204ENST00000459902 KCND1Q9NSA2 647 aa8.7□□□□□ -1.02
CKAP2-204ENST00000459902 MCM8Q9UJA3 840 aa8.7□□□□□ -1.02
CKAP2-204ENST00000459902 GPR39O43194 453 aa8.69□□□□□ -1.02
CKAP2-204ENST00000459902 NCLP19338 710 aaKnown RBP8.69□□□□□ -1.02
CKAP2-204ENST00000459902 MLLT6P55198 1093 aaPredicted RBP8.69□□□□□ -1.02
CKAP2-204ENST00000459902 PHC1P78364 1004 aa8.69□□□□□ -1.02
CKAP2-204ENST00000459902 LRRC32Q14392 662 aa8.69□□□□□ -1.02
CKAP2-204ENST00000459902 DDB1Q16531 1140 aa8.69□□□□□ -1.02
CKAP2-204ENST00000459902 VMACQ2NL98 169 aa8.69□□□□□ -1.02
CKAP2-204ENST00000459902 ZZZ3Q8IYH5 903 aa8.69□□□□□ -1.02
CKAP2-204ENST00000459902 RTF1Q92541 710 aaKnown RBP8.69□□□□□ -1.02
CKAP2-204ENST00000459902 WRNIP1Q96S55 665 aa8.69□□□□□ -1.02
CKAP2-204ENST00000459902 MS4A5Q9H3V2 200 aa8.69□□□□□ -1.02
CKAP2-204ENST00000459902 SH3D21A4FU49 640 aa8.68□□□□□ -1.02
CKAP2-204ENST00000459902 FBXO21O94952 628 aa8.68□□□□□ -1.02
CKAP2-204ENST00000459902 CDK11BP21127 795 aaKnown RBP8.68□□□□□ -1.02
CKAP2-204ENST00000459902 RPL13P26373 211 aaKnown RBP8.68□□□□□ -1.02
CKAP2-204ENST00000459902 CFPP27918 469 aa8.68□□□□□ -1.02
CKAP2-204ENST00000459902 ECE1P42892 770 aa8.68□□□□□ -1.02
CKAP2-204ENST00000459902 CDKN1CP49918 316 aaPredicted RBP8.68□□□□□ -1.02
CKAP2-204ENST00000459902 TMPRSS15P98073 1019 aa8.68□□□□□ -1.02
CKAP2-204ENST00000459902 ALDH6A1Q02252 535 aaKnown RBP8.68□□□□□ -1.02
CKAP2-204ENST00000459902 ADCY1Q08828 1119 aa8.68□□□□□ -1.02
CKAP2-204ENST00000459902 GPR158Q5T848 1215 aa8.68□□□□□ -1.02
CKAP2-204ENST00000459902 CIAPIN1Q6FI81 312 aa8.68□□□□□ -1.02
CKAP2-204ENST00000459902 TTLL7Q6ZT98 887 aa8.68□□□□□ -1.02
CKAP2-204ENST00000459902 NME9Q86XW9 330 aa8.68□□□□□ -1.02
CKAP2-204ENST00000459902 PHLDB1Q86UU1 1377 aa8.68□□□□□ -1.02
CKAP2-204ENST00000459902 A0A1B0GTL3 188 aa8.67□□□□□ -1.02
CKAP2-204ENST00000459902 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP8.67□□□□□ -1.02
CKAP2-204ENST00000459902 CYP7B1O75881 506 aa8.67□□□□□ -1.02
CKAP2-204ENST00000459902 COL6A1P12109 1028 aa8.67□□□□□ -1.02
CKAP2-204ENST00000459902 IBSPP21815 317 aaPredicted RBP8.67□□□□□ -1.02
CKAP2-204ENST00000459902 CD40P25942 277 aa8.67□□□□□ -1.02
CKAP2-204ENST00000459902 LSP1P33241 339 aa8.67□□□□□ -1.02
CKAP2-204ENST00000459902 IL13P35225 146 aa8.67□□□□□ -1.02
CKAP2-204ENST00000459902 IL13RA1P78552 427 aa8.67□□□□□ -1.02
CKAP2-204ENST00000459902 RNF219Q5W0B1 726 aaPredicted RBP8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms